FFCP PHASE1:Mm9::chr7:31320101..31320112,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:31320101..31320112,-
|short_description=p3@Arhgap33
|description=CAGE_peak_3_at_Arhgap33_5end
|association_with_transcript=-22bp_to_ENSMUST00000166635_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=233071 | |EntrezGene=233071 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=F6YRN3 | |UniProt=F6YRN3 | ||
|association_with_transcript=-22bp_to_ENSMUST00000166635_5end | |||
|cluster_id=chr7:31320101..31320112,- | |||
|description=CAGE_peak_3_at_Arhgap33_5end | |||
|id=chr7:31320101..31320112,- | |||
|ontology_enrichment_celltype=CL:0000117!1.48e-08!23;CL:0000337!1.48e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.13e-21,23;CL:0000337,7.13e-21,23;CL:0000540,1.63e-13,33;CL:0000047,1.63e-13,33;CL:0000031,1.63e-13,33;CL:0000404,1.63e-13,33;CL:0000393,6.42e-11,39;CL:0000211,6.42e-11,39;CL:0002319,1.35e-09,43;CL:0000221,2.65e-09,44;CL:0000133,2.65e-09,44;CL:0002613,1.04e-08,3;CL:0000120,1.65e-08,3;CL:0002612,1.30e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.06e-08!34;UBERON:0001049!4.46e-08!52;UBERON:0005068!4.46e-08!52;UBERON:0006241!4.46e-08!52;UBERON:0007135!4.46e-08!52;UBERON:0001017!1.96e-07!73;UBERON:0005743!1.96e-07!73;UBERON:0000955!2.18e-07!50;UBERON:0006238!2.18e-07!50;UBERON:0000073!3.05e-07!75;UBERON:0001016!3.05e-07!75;UBERON:0002346!3.93e-07!71;UBERON:0003075!3.93e-07!71;UBERON:0007284!3.93e-07!71;UBERON:0002791!6.29e-07!29;UBERON:0003528!6.29e-07!29;UBERON:0001893!6.29e-07!29;UBERON:0002616!6.73e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.83e-15,34;UBERON:0003528,8.33e-10,29;UBERON:0002791,8.33e-10,29;UBERON:0001893,8.33e-10,29;UBERON:0001017,4.29e-09,73;UBERON:0000369,7.11e-09,5;UBERON:0002435,7.11e-09,5;UBERON:0000204,7.11e-09,5;UBERON:0010082,7.11e-09,5;UBERON:0001016,9.87e-09,75;UBERON:0001049,1.67e-08,52;UBERON:0005068,1.67e-08,52;UBERON:0006241,1.67e-08,52;UBERON:0007135,1.67e-08,52;UBERON:0000073,4.62e-08,54;UBERON:0002420,7.11e-08,8;UBERON:0007245,7.11e-08,8;UBERON:0010009,7.11e-08,8;UBERON:0010011,7.11e-08,8;UBERON:0000454,7.11e-08,8;UBERON:0001948,7.77e-08,5;UBERON:0002315,7.77e-08,5;UBERON:0002257,1.30e-07,3;UBERON:0002346,3.38e-07,64;UBERON:0003075,3.38e-07,64;UBERON:0007284,3.38e-07,64;UBERON:0004121,9.56e-07,95;UBERON:0000924,9.56e-07,95;UBERON:0006601,9.56e-07,95 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,1.39912375625629,0,0,0,3.48677489619386,0.198581902401771,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,2.42779753031517,4.23192783417626,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0.933206510776299,1.75507719831198,1.05162480675691,1.71390590642282,0,1.10241719293459,1.91690942036473,0.919218786610021,0,0.893811366596314,0.46081959976873,3.16527090552465,2.8361169516747,1.56274011167028,0,0,1.06958773443767,1.47314292736834,1.13897344639282,1.4911955666024,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0.520455980298408,0,0.461230994512117,0.452167921657868,0.23517741427141,0,0,0,0,0.161766849947409,0.883366073841574,0,0,0.585561594023094,0.628340120440365,0,0.11981512450592,0,0,0.149790639404823,0.915001205637253,2.26177833803156,1.39059456153821,1.79000820131231,0.83115217823824,0.811206315338788,0.203678727700633,0.124406970610093,0,0,0.780722657776222,0,0.360124259610698,0.150704817835715,1.08858398642125,0.640568601424249,0.562210347358373,0,0.646703978798527,0.945530400839096,0.703804496655795,0.43839146485515,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0,0.210289948564127,1.85228302282712,0,0,0.426576501070468,0.232236671860439,0.644337306610467,0.201683524623343,0.444756087689741,0.380451252225118,0,0,0.502670417600539,0,0,0,0,0,0.379335801906163,0.571242563048644,2.25415471346161,0.610953983535943,0,0.350679099451593,0.126473074248515,0.147610147979602,0,0,0,1.16791574001266,0,0.449724224769707,0,0,0.763877555344259,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0.37898282354097,0.977789858652155,0.339490171550376,0.704070744865506,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0.481651769963376,0.820481806145422,0,0,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0,0,0,0.395287777946524,2.24924921495265,0,0.534196811001766,0.325773918707152,0.329940245945071,0,0.242780636154981,0.906970670894253,0.188605079755898,0.590603785761546,0.307435147943927,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0,0,0.258717367565509,0.428674070063185,0.177340233642274,0.356737635204141,0.493647061806363,0,0,0,0,0.16488625294148,0.322928853391811,0.241251699712623,0.119372344003136,0.164140899745061,0,0.18542530201051,0.341741761595705,0.206386867963223,0.185194527369712,0.941842285023455,0.683471138605126,0.686334519619568,0,0,0,0.954670618015114,0.316335993581135,0,0.432021363287205,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,7.32800820289447,0.299033092087958,0.992750942742586,0.777804753376191,0.129159823477731,0.675824501963113,0.234714477291508,0,0.734015410979976,3.14059357073808,9.50499020650956,0.316011120628178,0.405450430580328,0.513554785824136,0.25984164595559,1.07416017400489,0.39736270956253,0.841368146639782,0.443068581523732,0.302899349844443,0.533447646584999,0.403304740547362,0.487289403698762,0.288635524920988,0.233753804363138,0,0,0,0,0,0,0.36630324853453,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0.68741272937475,0,0,0,0.45032120322422,0.453142408984205,1.55328093525546,0.207574695168353,1.99512436700516,0.341467211508268,1.94485373654635,0.628839487883947,0,0,0.824140228955577,1.28367683836726,0.252697211763798,0.760437899670719,0.377252682772152,0.561849044819294,0.576226371643824,0.574354689556133,1.42888107384922,1.50649623728312,0.578727661391115,0,0.441596760403192,0,0.177475806159338,0.238436189947321,0.581385666529314,0.376437521661322,0.592302255241736,0,0.526139422875686,0.271608227691724,1.12228454331548,0.355905054372522,0.394017929502254,0.818462086339379,0.154936841185966,0,1.24905288968973,0.233931608445408,0.214871054048298,0.382576664137687,0,0 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|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,1.39912375625629,0,0,0,3.48677489619386,0.198581902401771,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,2.42779753031517,4.23192783417626,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0.933206510776299,1.75507719831198,1.05162480675691,1.71390590642282,0,1.10241719293459,1.91690942036473,0.919218786610021,0,0.893811366596314,0.46081959976873,3.16527090552465,2.8361169516747,1.56274011167028,0,0,1.06958773443767,1.47314292736834,1.13897344639282,1.4911955666024,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0.520455980298408,0,0.461230994512117,0.452167921657868,0.23517741427141,0,0,0,0,0.161766849947409,0.883366073841574,0,0,0.585561594023094,0.628340120440365,0,0.11981512450592,0,0,0.149790639404823,0.915001205637253,2.26177833803156,1.39059456153821,1.79000820131231,0.83115217823824,0.811206315338788,0.203678727700633,0.124406970610093,0,0,0.780722657776222,0,0.360124259610698,0.150704817835715,1.08858398642125,0.640568601424249,0.562210347358373,0,0.646703978798527,0.945530400839096,0.703804496655795,0.43839146485515,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0,0.210289948564127,1.85228302282712,0,0,0.426576501070468,0.232236671860439,0.644337306610467,0.201683524623343,0.444756087689741,0.380451252225118,0,0,0.502670417600539,0,0,0,0,0,0.379335801906163,0.571242563048644,2.25415471346161,0.610953983535943,0,0.350679099451593,0.126473074248515,0.147610147979602,0,0,0,1.16791574001266,0,0.449724224769707,0,0,0.763877555344259,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0.37898282354097,0.977789858652155,0.339490171550376,0.704070744865506,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0.481651769963376,0.820481806145422,0,0,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0,0,0,0.395287777946524,2.24924921495265,0,0.534196811001766,0.325773918707152,0.329940245945071,0,0.242780636154981,0.906970670894253,0.188605079755898,0.590603785761546,0.307435147943927,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0,0,0.258717367565509,0.428674070063185,0.177340233642274,0.356737635204141,0.493647061806363,0,0,0,0,0.16488625294148,0.322928853391811,0.241251699712623,0.119372344003136,0.164140899745061,0,0.18542530201051,0.341741761595705,0.206386867963223,0.185194527369712,0.941842285023455,0.683471138605126,0.686334519619568,0,0,0,0.954670618015114,0.316335993581135,0,0.432021363287205,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,7.32800820289447,0.299033092087958,0.992750942742586,0.777804753376191,0.129159823477731,0.675824501963113,0.234714477291508,0,0.734015410979976,3.14059357073808,9.50499020650956,0.316011120628178,0.405450430580328,0.513554785824136,0.25984164595559,1.07416017400489,0.39736270956253,0.841368146639782,0.443068581523732,0.302899349844443,0.533447646584999,0.403304740547362,0.487289403698762,0.288635524920988,0.233753804363138,0,0,0,0,0,0,0.36630324853453,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0.68741272937475,0,0,0,0.45032120322422,0.453142408984205,1.55328093525546,0.207574695168353,1.99512436700516,0.341467211508268,1.94485373654635,0.628839487883947,0,0,0.824140228955577,1.28367683836726,0.252697211763798,0.760437899670719,0.377252682772152,0.561849044819294,0.576226371643824,0.574354689556133,1.42888107384922,1.50649623728312,0.578727661391115,0,0.441596760403192,0,0.177475806159338,0.238436189947321,0.581385666529314,0.376437521661322,0.592302255241736,0,0.526139422875686,0.271608227691724,1.12228454331548,0.355905054372522,0.394017929502254,0.818462086339379,0.154936841185966,0,1.24905288968973,0.233931608445408,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p3@Arhgap33 | |||
}} | }} |
Latest revision as of 14:57, 26 September 2015
Short description: | p3@Arhgap33 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Arhgap33_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -22bp_to_ENSMUST00000166635_5end |
EntrezGene: | Arhgap33 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.13e-21 | 23 |
neuroblast (sensu Vertebrata) | 7.13e-21 | 23 |
neuron | 1.63e-13 | 33 |
neuronal stem cell | 1.63e-13 | 33 |
neuroblast | 1.63e-13 | 33 |
electrically signaling cell | 1.63e-13 | 33 |
electrically responsive cell | 6.42e-11 | 39 |
electrically active cell | 6.42e-11 | 39 |
neural cell | 1.35e-09 | 43 |
ectodermal cell | 2.65e-09 | 44 |
neurectodermal cell | 2.65e-09 | 44 |
striatum neuron | 1.04e-08 | 3 |
granule cell | 1.65e-08 | 3 |
neuron of the ventral spinal cord | 1.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gray matter | 6.83e-15 | 34 |
brain grey matter | 8.33e-10 | 29 |
regional part of telencephalon | 8.33e-10 | 29 |
telencephalon | 8.33e-10 | 29 |
central nervous system | 4.29e-09 | 73 |
corpus striatum | 7.11e-09 | 5 |
striatum | 7.11e-09 | 5 |
ventral part of telencephalon | 7.11e-09 | 5 |
future corpus striatum | 7.11e-09 | 5 |
nervous system | 9.87e-09 | 75 |
neural tube | 1.67e-08 | 52 |
neural rod | 1.67e-08 | 52 |
future spinal cord | 1.67e-08 | 52 |
neural keel | 1.67e-08 | 52 |
regional part of nervous system | 4.62e-08 | 54 |
basal ganglion | 7.11e-08 | 8 |
nuclear complex of neuraxis | 7.11e-08 | 8 |
aggregate regional part of brain | 7.11e-08 | 8 |
collection of basal ganglia | 7.11e-08 | 8 |
cerebral subcortex | 7.11e-08 | 8 |
regional part of spinal cord | 7.77e-08 | 5 |
gray matter of spinal cord | 7.77e-08 | 5 |
ventral horn of spinal cord | 1.30e-07 | 3 |
neurectoderm | 3.38e-07 | 64 |
neural plate | 3.38e-07 | 64 |
presumptive neural plate | 3.38e-07 | 64 |
ectoderm-derived structure | 9.56e-07 | 95 |
ectoderm | 9.56e-07 | 95 |
presumptive ectoderm | 9.56e-07 | 95 |