Personal tools

FFCP PHASE1:Mm9::chr10:94407469..94407496,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr10:94407469..94407496,- |short_description=p1@Plxnc1 |description=CAGE_peak_1_at_Plxnc1_5end |association_with_transcript=-257bp_to_ENSMUST00000099337,NM_018...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr10:94407469..94407496,-
|DHSsupport=NA
|short_description=p1@Plxnc1
|DPIdataset=NA
|description=CAGE_peak_1_at_Plxnc1_5end
|association_with_transcript=-257bp_to_ENSMUST00000099337,NM_018797,uc007gvz.2_5end
|EntrezGene=54712
|EntrezGene=54712
|HGNC=
|HGNC=
|MCL_coexpression_id=137
|TSSclassifier=NA
|UniProt=Q9QZC2,Q9CRY9
|UniProt=Q9QZC2,Q9CRY9
|association_with_transcript=-257bp_to_ENSMUST00000099337,NM_018797,uc007gvz.2_5end
|cluster_id=chr10:94407469..94407496,-
|description=CAGE_peak_1_at_Plxnc1_5end
|id=chr10:94407469..94407496,-
|ontology_enrichment_celltype=CL:0000117!8.82e-10!23;CL:0000337!8.82e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.70e-10,23;CL:0000337,4.70e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000025!3.39e-10!114;UBERON:0002020!4.24e-09!34;UBERON:0003056!1.56e-08!49;UBERON:0001049!1.75e-08!52;UBERON:0005068!1.75e-08!52;UBERON:0006241!1.75e-08!52;UBERON:0007135!1.75e-08!52;UBERON:0000955!1.02e-07!50;UBERON:0006238!1.02e-07!50;UBERON:0003080!1.16e-07!40;UBERON:0004111!1.18e-07!122;UBERON:0002616!2.31e-07!49;UBERON:0002780!2.58e-07!39;UBERON:0001890!2.58e-07!39;UBERON:0006240!2.58e-07!39;UBERON:0000033!3.02e-07!63;UBERON:0002791!4.48e-07!29;UBERON:0003528!4.48e-07!29;UBERON:0001893!4.48e-07!29;UBERON:0002346!8.63e-07!71;UBERON:0003075!8.63e-07!71;UBERON:0007284!8.63e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.72e-10,114;UBERON:0000073,8.75e-10,54;UBERON:0002020,1.51e-09,34;UBERON:0001049,5.26e-09,52;UBERON:0005068,5.26e-09,52;UBERON:0006241,5.26e-09,52;UBERON:0007135,5.26e-09,52;UBERON:0003056,6.30e-09,49;UBERON:0002346,8.58e-09,64;UBERON:0003075,8.58e-09,64;UBERON:0007284,8.58e-09,64;UBERON:0003080,4.94e-08,40;UBERON:0004111,6.05e-08,122;UBERON:0002780,1.14e-07,39;UBERON:0001890,1.14e-07,39;UBERON:0006240,1.14e-07,39;UBERON:0003528,1.92e-07,29;UBERON:0002791,1.92e-07,29;UBERON:0001893,1.92e-07,29;UBERON:0000955,2.12e-07,47;UBERON:0006238,2.12e-07,47;UBERON:0001017,4.07e-07,73;UBERON:0002616,4.85e-07,46
|phase1_expression=0.640595388419176,0,0,0,0,0.839396359559449,0,3.35720640948098,1.267098499365,3.27690336850791,0.171217968225505,0.0797721589953364,0.171200729931206,1.31130603628496,5.66286595086627,3.44207954562704,3.49780939064073,8.67520954735154,7.67840828192137,10.6097412949508,3.57181818634493,4.56738375524072,5.74639536105658,0.95995453676044,1.14704640533585,0,0,0,0,0.252030129759931,0.665191531965914,0,0.61506478758457,0,0,0,0,56.9203017802195,36.7227611926186,40.8348520299563,60.5878432671945,64.2062755860939,64.0873666001123,0,0,0,0,1.52617609466313,0,0.194429899074283,0.279972843250725,0,4.69791296961662,1.45072428402269,0.672187598284928,0.514518872071894,1.14613375975503,1.03134418455488,16.3876333296274,17.9856932952491,13.9442908771359,0,0,9.89889689009539,11.8663963508037,9.2362414942993,5.69240209984969,3.45796474789399,2.90330914463737,3.78016627328734,4.20649922702764,5.42736870367227,7.06779331045163,10.9016811301309,8.14686503655009,12.8690630125403,6.60695285996332,5.49055553766307,4.45458946443106,15.9582408153535,16.6507511356386,14.0646610050325,2.79182999001381,6.75315132038016,6.72312290217964,10.9012576625257,10.2507610175354,9.87917062874093,0.151452386666368,0.151143120213571,93.9160943393436,47.3233132339763,0,4.31762553310254,10.3964226791627,1.79210754838934,3.08977724289854,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0.253359865475099,0,3.9964357901671,8.54495016035667,2.52351636410202,2.08182392119363,0.608930956624282,0.922461989024234,1.3565037649736,1.99900802130698,0.502666365318702,0.494389935468748,0.86759614151947,11.4999371753484,1.29413479957927,5.96272099843063,3.39412677194655,0,3.22058876712702,2.93225389538837,0.510914110417183,5.87094110079009,4.19931911695385,3.04968544975355,7.04016005202667,4.11750542536764,13.3193613239636,9.38651329038293,4.85859368927628,9.97382613885888,4.86723789203273,1.32391173005411,3.23458123586242,0.252722758433675,2.31486041475121,2.73252930221678,3.67843367093557,4.50155324513373,4.82255417074288,7.55205140579739,3.71529788826064,4.8724896771059,1.55222022443409,0.215567992932842,1.13463648100692,2.81521798662318,2.19195732427575,1.11218899690239,2.78601733217733,1.64625709126355,4.97585667046233,0,1.54408744268829,2.84163499395593,3.10688658803253,3.75241695969754,1.2604344302271,2.13070262026689,3.14822770795846,1.23413690309903,0.465067889500816,0.804820204198858,1.86824547787471,2.96207729844265,0.820837320395476,1.94565142910054,1.60819986167866,0.878200461164203,2.14730270016595,4.6263788684108,6.48299057989492,0,0.528901133327089,0.639864751605702,0.696710015581316,0.77320476793256,0.403367049246685,0.889512175379481,0.951128130562796,1.89811624617805,0.823494773620054,1.50801125280162,0.397912944082302,1.36474860983384,1.79763881730844,0.648414149624083,0.597423819763102,2.0863469104839,1.25673363870702,1.1270773567308,1.01825663922657,0.581857461502877,0.631222379012867,1.20149420536089,0.590440591918409,0,0,7.11486305009157,2.16898637430922,2.94838492669805,2.69834534861824,3.24576194221605,3.61765739628625,3.8193877767213,5.17853047411459,8.59316701907687,5.49122826376163,30.1913233707445,8.55924179637558,11.5453939052387,9.85057623993736,5.38192240565737,7.71909634181387,5.17308932466493,2.65287976478679,3.25929952884052,3.56464680127895,2.81628297946203,3.35012514883632,3.33261097240419,4.48807390072937,6.46304090835383,6.42247599981447,12.118562417969,5.73521601505083,3.9717545829156,3.90552458170081,30.1582567878545,14.1415477792864,0.983528546038072,0.275936746304732,3.05046120976805,1.40654023910644,0,0.757412781613119,0.315508219416257,0,1.93881057959519,0.238968797952552,0,0.566153061577665,1.61924280669958,1.46127928955656,0.395287777946524,7.71171159412337,6.81312408999689,4.27357448801413,3.90928702448583,2.96946221350564,1.32745138339963,0.242780636154981,0.302323556964751,0,1.18120757152309,0.307435147943927,0,2.54473610634254,0,0.948110273807448,0,0,1.36175842301515,2.88097750450096,2.71653235943784,2.35770738534752,4.25616560741457,2.67553226403106,2.63278432963394,3.95804433848979,0.23467170806371,0,0,2.30840754118072,1.93757312035087,1.32688434841943,1.3130957840345,0.328281799490123,2.62332752966866,3.33765543618917,7.34744787430767,2.27025554759545,2.59272338317596,3.95573759709851,3.14396723758358,4.57556346413045,5.43930975980337,6.71766971153558,6.35719879500349,0.954670618015114,1.42351197111511,1.62655573701479,0.540026704109006,1.04544148007234,0.655087691238533,0.404593039154462,1.81837602595739,1.04702376793612,0.388844919875379,1.24267862617385,1.69107881605257,9.27002585472668,5.62558867554132,10.8892665472667,8.13706887909706,10.4752797804282,10.5621514781179,24.4784243506626,22.9641964292307,6.03960302065015,3.45636007509439,0.632022241256357,0.608175645870493,0.410843828659309,0.77952493786677,0.895133478337407,0.198681354781265,0.961563596159751,0.738447635872886,0.706765149637033,0.990688486514998,0.705783295957884,1.65678397257579,1.34696578296461,0.818138315270983,0.226730383615211,0,0,0,0,1.31377732815827,1.83151624267265,1.50057865355346,0,3.95326289831947,2.76195141904306,5.15605962095457,4.98374228796694,8.22099023724771,2.2661816921691,6.75022500231806,6.75481804836331,6.79713613476307,5.69536342927002,0.31136204275253,4.38927360741134,3.58540572083682,2.91728060481953,0.628839487883947,2.20612210140017,2.66696073361938,3.5025959730612,3.20919209591815,3.79045817645696,2.28131369901216,3.77252682772152,3.09016974650612,2.30490548657529,3.4461281373368,2.38146845641537,4.1718357340148,4.43691207066522,4.12085900803307,3.53277408322554,1.37147700954166,2.30718548007139,3.81497903915713,2.18019624948493,2.82328141245992,1.69229215783353,2.92684756596436,2.89376682581627,2.8518863907631,1.68342681497322,3.44041552560105,4.13718825977367,2.86461730218783,2.47898945897546,4.43685205256625,5.49583271463481,3.50897412668113,2.14871054048298,1.72159498861959,1.98532277207564,2.78241402744506
|phase1_expression=0.640595388419176,0,0,0,0,0.839396359559449,0,3.35720640948098,1.267098499365,3.27690336850791,0.171217968225505,0.0797721589953364,0.171200729931206,1.31130603628496,5.66286595086627,3.44207954562704,3.49780939064073,8.67520954735154,7.67840828192137,10.6097412949508,3.57181818634493,4.56738375524072,5.74639536105658,0.95995453676044,1.14704640533585,0,0,0,0,0.252030129759931,0.665191531965914,0,0.61506478758457,0,0,0,0,56.9203017802195,36.7227611926186,40.8348520299563,60.5878432671945,64.2062755860939,64.0873666001123,0,0,0,0,1.52617609466313,0,0.194429899074283,0.279972843250725,0,4.69791296961662,1.45072428402269,0.672187598284928,0.514518872071894,1.14613375975503,1.03134418455488,16.3876333296274,17.9856932952491,13.9442908771359,0,0,9.89889689009539,11.8663963508037,9.2362414942993,5.69240209984969,3.45796474789399,2.90330914463737,3.78016627328734,4.20649922702764,5.42736870367227,7.06779331045163,10.9016811301309,8.14686503655009,12.8690630125403,6.60695285996332,5.49055553766307,4.45458946443106,15.9582408153535,16.6507511356386,14.0646610050325,2.79182999001381,6.75315132038016,6.72312290217964,10.9012576625257,10.2507610175354,9.87917062874093,0.151452386666368,0.151143120213571,93.9160943393436,47.3233132339763,0,4.31762553310254,10.3964226791627,1.79210754838934,3.08977724289854,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0.253359865475099,0,3.9964357901671,8.54495016035667,2.52351636410202,2.08182392119363,0.608930956624282,0.922461989024234,1.3565037649736,1.99900802130698,0.502666365318702,0.494389935468748,0.86759614151947,11.4999371753484,1.29413479957927,5.96272099843063,3.39412677194655,0,3.22058876712702,2.93225389538837,0.510914110417183,5.87094110079009,4.19931911695385,3.04968544975355,7.04016005202667,4.11750542536764,13.3193613239636,9.38651329038293,4.85859368927628,9.97382613885888,4.86723789203273,1.32391173005411,3.23458123586242,0.252722758433675,2.31486041475121,2.73252930221678,3.67843367093557,4.50155324513373,4.82255417074288,7.55205140579739,3.71529788826064,4.8724896771059,1.55222022443409,0.215567992932842,1.13463648100692,2.81521798662318,2.19195732427575,1.11218899690239,2.78601733217733,1.64625709126355,4.97585667046233,0,1.54408744268829,2.84163499395593,3.10688658803253,3.75241695969754,1.2604344302271,2.13070262026689,3.14822770795846,1.23413690309903,0.465067889500816,0.804820204198858,1.86824547787471,2.96207729844265,0.820837320395476,1.94565142910054,1.60819986167866,0.878200461164203,2.14730270016595,4.6263788684108,6.48299057989492,0,0.528901133327089,0.639864751605702,0.696710015581316,0.77320476793256,0.403367049246685,0.889512175379481,0.951128130562796,1.89811624617805,0.823494773620054,1.50801125280162,0.397912944082302,1.36474860983384,1.79763881730844,0.648414149624083,0.597423819763102,2.0863469104839,1.25673363870702,1.1270773567308,1.01825663922657,0.581857461502877,0.631222379012867,1.20149420536089,0.590440591918409,0,0,7.11486305009157,2.16898637430922,2.94838492669805,2.69834534861824,3.24576194221605,3.61765739628625,3.8193877767213,5.17853047411459,8.59316701907687,5.49122826376163,30.1913233707445,8.55924179637558,11.5453939052387,9.85057623993736,5.38192240565737,7.71909634181387,5.17308932466493,2.65287976478679,3.25929952884052,3.56464680127895,2.81628297946203,3.35012514883632,3.33261097240419,4.48807390072937,6.46304090835383,6.42247599981447,12.118562417969,5.73521601505083,3.9717545829156,3.90552458170081,30.1582567878545,14.1415477792864,0.983528546038072,0.275936746304732,3.05046120976805,1.40654023910644,0,0.757412781613119,0.315508219416257,0,1.93881057959519,0.238968797952552,0,0.566153061577665,1.61924280669958,1.46127928955656,0.395287777946524,7.71171159412337,6.81312408999689,4.27357448801413,3.90928702448583,2.96946221350564,1.32745138339963,0.242780636154981,0.302323556964751,0,1.18120757152309,0.307435147943927,0,2.54473610634254,0,0.948110273807448,0,0,1.36175842301515,2.88097750450096,2.71653235943784,2.35770738534752,4.25616560741457,2.67553226403106,2.63278432963394,3.95804433848979,0.23467170806371,0,0,2.30840754118072,1.93757312035087,1.32688434841943,1.3130957840345,0.328281799490123,2.62332752966866,3.33765543618917,7.34744787430767,2.27025554759545,2.59272338317596,3.95573759709851,3.14396723758358,4.57556346413045,5.43930975980337,6.71766971153558,6.35719879500349,0.954670618015114,1.42351197111511,1.62655573701479,0.540026704109006,1.04544148007234,0.655087691238533,0.404593039154462,1.81837602595739,1.04702376793612,0.388844919875379,1.24267862617385,1.69107881605257,9.27002585472668,5.62558867554132,10.8892665472667,8.13706887909706,10.4752797804282,10.5621514781179,24.4784243506626,22.9641964292307,6.03960302065015,3.45636007509439,0.632022241256357,0.608175645870493,0.410843828659309,0.77952493786677,0.895133478337407,0.198681354781265,0.961563596159751,0.738447635872886,0.706765149637033,0.990688486514998,0.705783295957884,1.65678397257579,1.34696578296461,0.818138315270983,0.226730383615211,0,0,0,0,1.31377732815827,1.83151624267265,1.50057865355346,0,3.95326289831947,2.76195141904306,5.15605962095457,4.98374228796694,8.22099023724771,2.2661816921691,6.75022500231806,6.75481804836331,6.79713613476307,5.69536342927002,0.31136204275253,4.38927360741134,3.58540572083682,2.91728060481953,0.628839487883947,2.20612210140017,2.66696073361938,3.5025959730612,3.20919209591815,3.79045817645696,2.28131369901216,3.77252682772152,3.09016974650612,2.30490548657529,3.4461281373368,2.38146845641537,4.1718357340148,4.43691207066522,4.12085900803307,3.53277408322554,1.37147700954166,2.30718548007139,3.81497903915713,2.18019624948493,2.82328141245992,1.69229215783353,2.92684756596436,2.89376682581627,2.8518863907631,1.68342681497322,3.44041552560105,4.13718825977367,2.86461730218783,2.47898945897546,4.43685205256625,5.49583271463481,3.50897412668113,2.14871054048298,1.72159498861959,1.98532277207564,2.78241402744506
|short_description=p1@Plxnc1
}}
}}

Latest revision as of 14:52, 26 September 2015

Short description:p1@Plxnc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Plxnc1_5end
Coexpression cluster:MCL_coexpression_mm9:137
Association with transcript: -257bp_to_ENSMUST00000099337, NM_018797, uc007gvz.2_5end
EntrezGene:Plxnc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Plxnc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.44
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.68
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.75
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G856.92
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H136.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H340.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G960.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H264.21
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H464.09
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C316.39
Mouse Granule cells, donor2.CNhs12357.11731-123E317.99
Mouse Granule cells, donor3.CNhs12108.11636-122C713.94
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E711.87
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.24
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.90
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.07
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D612.87
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.06
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.72
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.90
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.88
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G393.92
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F747.32
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F410.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.00
accessory axillary lymph node, adult.CNhs10475.1063-29H98.54
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A65.96
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.87
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.05
corpora quadrigemina, adult.CNhs10501.16-22A47.04
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F113.32
cortex, adult.CNhs10473.12-14D59.39
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F29.97
diencephalon, neonate N30.CNhs11201.1388-42B24.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C94.50
eyeball, embryo E17.CNhs11023.1261-18D44.82
eyeball, neonate N00.CNhs11207.633-15C67.55
eyeball, neonate N01.CNhs11140.1532-43E73.72
eyeball, neonate N02.CNhs11205.1551-44G84.87
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I64.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I22.96
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G11.95
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G16.48
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B27.11
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D73.25
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G45.18
liver, neonate N00.CNhs11117.641-24F48.59
liver, neonate N03.CNhs11123.1345-25G25.49
liver, neonate N06.CNhs11101.684-20A830.19
liver, neonate N07.CNhs11103.716-20H28.56
liver, neonate N10.CNhs11115.751-24B911.55
liver, neonate N20.CNhs11220.823-25A39.85
liver, neonate N25.CNhs11198.1368-26H15.38
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B15.17
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F83.26
lung, embryo E15.CNhs11020.432-17C53.56
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C64.49
lung, neonate N06.CNhs11212.683-20E56.46
lung, neonate N07.CNhs11111.715-19A36.42
lung, neonate N10.CNhs11219.750-23E612.12
lung, neonate N20.CNhs11109.822-18A45.74
lung, neonate N25.CNhs11119.1359-25C73.97
lung, neonate N30.CNhs11133.1394-42H23.91
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A130.16
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.14
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I97.71
ovary, adult.CNhs10507.91-2I76.81
ovary, embryo E18.CNhs11040.505-44H74.27
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C72.72
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B94.26
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H31.33
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G27.35
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D13.96
spleen, neonate N20.CNhs11112.824-19H13.14
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.36
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F59.27
testis, embryo E15.CNhs11034.443-27C55.63
testis, embryo E16.CNhs11033.470-26G510.89
testis, embryo E17.CNhs11029.486-18I58.14
testis, embryo E18.CNhs11027.503-18G510.48
testis, neonate N00.CNhs11189.1300-22B710.56
testis, neonate N07.CNhs11222.726-26I424.48
testis, neonate N10.CNhs11204.763-44D922.96
testis, neonate N20.CNhs11110.839-18H36.04
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A21.66
thymus, neonate N25.CNhs11125.1362-25G71.35
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.45
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.70e-1023
neuroblast (sensu Vertebrata)4.70e-1023

Uber anatomy
Ontology termp-valuen
tube1.72e-10114
regional part of nervous system8.75e-1054
gray matter1.51e-0934
neural tube5.26e-0952
neural rod5.26e-0952
future spinal cord5.26e-0952
neural keel5.26e-0952
pre-chordal neural plate6.30e-0949
neurectoderm8.58e-0964
neural plate8.58e-0964
presumptive neural plate8.58e-0964
anterior neural tube4.94e-0840
anatomical conduit6.05e-08122
regional part of forebrain1.14e-0739
forebrain1.14e-0739
future forebrain1.14e-0739
brain grey matter1.92e-0729
regional part of telencephalon1.92e-0729
telencephalon1.92e-0729
brain2.12e-0747
future brain2.12e-0747
central nervous system4.07e-0773
regional part of brain4.85e-0746
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:94407469..94407496,-&oldid=4259151"