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FFCP PHASE1:Mm9::chr9:37360310..37360326,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:37360310..37360326,-
|DHSsupport=NA
|short_description=p2@Nrgn
|DPIdataset=NA
|description=CAGE_peak_2_at_Nrgn_5end
|association_with_transcript=3bp_to_ENSMUST00000065668,NM_022029,uc009ovc.1_5end
|EntrezGene=64011
|EntrezGene=64011
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=P60761
|UniProt=P60761
|association_with_transcript=3bp_to_ENSMUST00000065668,NM_022029,uc009ovc.1_5end
|cluster_id=chr9:37360310..37360326,-
|description=CAGE_peak_2_at_Nrgn_5end
|id=chr9:37360310..37360326,-
|ontology_enrichment_celltype=CL:0000117!2.49e-07!23;CL:0000337!2.49e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.92e-08,23;CL:0000337,4.92e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!1.52e-12!50;UBERON:0006238!1.52e-12!50;UBERON:0001049!1.58e-12!52;UBERON:0005068!1.58e-12!52;UBERON:0006241!1.58e-12!52;UBERON:0007135!1.58e-12!52;UBERON:0002020!2.72e-12!34;UBERON:0002616!5.50e-12!49;UBERON:0002791!1.16e-10!29;UBERON:0003528!1.16e-10!29;UBERON:0001893!1.16e-10!29;UBERON:0003080!2.66e-10!40;UBERON:0002780!9.38e-10!39;UBERON:0001890!9.38e-10!39;UBERON:0006240!9.38e-10!39;UBERON:0001017!1.18e-08!73;UBERON:0005743!1.18e-08!73;UBERON:0002021!2.56e-08!10;UBERON:0000411!2.56e-08!10;UBERON:0001950!2.56e-08!10;UBERON:0003056!3.13e-08!49;UBERON:0000033!3.66e-08!63;UBERON:0000073!5.76e-08!75;UBERON:0001016!5.76e-08!75;UBERON:0002346!8.18e-08!71;UBERON:0003075!8.18e-08!71;UBERON:0007284!8.18e-08!71;UBERON:0002619!1.61e-07!17;UBERON:0000956!2.04e-07!21;UBERON:0001869!2.04e-07!21;UBERON:0000203!2.04e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.08e-17,34;UBERON:0000073,7.84e-16,54;UBERON:0003528,4.89e-15,29;UBERON:0002791,4.89e-15,29;UBERON:0001893,4.89e-15,29;UBERON:0001049,3.22e-14,52;UBERON:0005068,3.22e-14,52;UBERON:0006241,3.22e-14,52;UBERON:0007135,3.22e-14,52;UBERON:0003080,3.36e-12,40;UBERON:0000955,3.67e-12,47;UBERON:0006238,3.67e-12,47;UBERON:0002021,5.41e-12,10;UBERON:0000411,5.41e-12,10;UBERON:0001950,5.41e-12,10;UBERON:0001017,8.97e-12,73;UBERON:0002780,2.02e-11,39;UBERON:0001890,2.02e-11,39;UBERON:0006240,2.02e-11,39;UBERON:0002616,2.03e-11,46;UBERON:0002619,3.97e-11,17;UBERON:0001016,4.17e-11,75;UBERON:0000956,1.34e-10,21;UBERON:0001869,1.34e-10,21;UBERON:0000203,1.34e-10,21;UBERON:0002346,4.85e-10,64;UBERON:0003075,4.85e-10,64;UBERON:0007284,4.85e-10,64;UBERON:0003056,5.78e-09,49;UBERON:0010371,1.83e-07,73
|phase1_expression=0,0,0,0,0,3.18970616632591,2.33612640595526,0.129123323441576,0.281577444303333,0,0,0,0,0.0874204024189974,0.999329285446988,0.404950534779652,0,2.99689057090326,0.959801035240171,0.84877930359606,40.3955628217581,32.2695591402877,24.0303806007821,0.95995453676044,1.14704640533585,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0.221730510655305,2.54012269383853,3.69038872550742,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.699932108126813,0,1.17447824240415,0,0,0,0,0,1.82084814773638,2.11596391708813,0.633831403506179,3.04960078862219,2.66788438833342,0,0,0,0.599200221036809,0,0.207379224616955,0.405017814995072,1.26194976810829,6.56997264128748,7.50953039235486,2.69479758272899,1.82106394934649,0.919218786610021,29.731287869835,49.670374515138,31.4893393175299,0.527545150920775,1.64677758484337,3.12548022334056,8.09630697104005,24.7615548413939,42.1723163863996,6.18720029494702,3.41692033917847,0.372798891650601,0.227178579999552,0,0,0,0,0,0,0,10.6737759300131,0,0,0,0,0,0,0,0,0,0,5.82337786567206,1.8125651855302,0,0.173485326766136,0.304465478312141,0.461230994512117,0.301445281105245,0.117588707135705,0.376999773989026,0.247194967734374,1.3013942122792,4.42305275974937,0.485300549842228,0.662524555381181,1.45462575940567,0,0.585561594023094,0.628340120440365,1.53274233125155,0.838705871541442,1.19980546198682,1.52484272487678,66.9564158139557,243.390320699509,14.9528679014309,379.284666659547,433.693415632241,29.5059023274575,121.031982248547,0.611036183101898,1.36847667671102,1.26361379216837,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.476255494059295,0.2562274405697,0.468508622798644,1.29351685369508,0.431135985865684,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,1.0447564995665,0.61734640922383,0.59710280045548,0,0.257347907114715,0.568326998791185,0.207125772535502,0.469052119962192,0.900310307305074,0.23674473558521,0,0.154267112887378,0,0.536546802799238,0,0,0,0.324275238183423,0.292399974850665,0.658650345873152,0.671032093801859,332.047828782757,19.9634948015812,0.660837565967596,0.264450566663544,0.639864751605702,0.464473343720877,0.257734922644187,0.403367049246685,0.444756087689741,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,2.69645822596266,0,0.199141273254367,0.758671603812327,0.228497025219458,1.1270773567308,0.203651327845314,0,0.0701358198903186,0.189709611372772,0.590440591918409,0.31399745568275,0.246794327843601,0.296452627087149,4.00428253718626,3.14494392181125,2.47348323623339,1.21716072833102,0.72353147925725,0.763877555344259,1.72617682470486,0.972811360650212,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0,0,0.923765950833023,1.13694847062291,0.814824882210129,0.339490171550376,0,0.167506257441816,0.238043640886014,0.195133647857799,0.788175720530955,0.44292937929755,0.478364305972461,0.491589944147214,0.863424909329478,1.01254341007058,0,0,0,0.275936746304732,4.33486592967038,3.16471553798949,0.163934945376675,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0,50.1261253618019,0.709700426041343,1.24645922567079,1.14020871547503,0.164970122972535,0,0.485561272309963,0,0,0.295301892880773,0.307435147943927,0,0,0,0.632073515871632,0,0,0.680879211507576,0.720244376125241,0.388076051348264,0.428674070063185,0.177340233642274,0.356737635204141,0.329098041204242,0.304464949114599,7.97883807416615,5.71946591332314,0,0,0,0.120625849856312,0.358117032009409,0.164140899745061,0.582961673259701,6.67531087237835,1.87957968877638,0.619160603889667,0.555583582109135,1.31857919903284,1.91371918809435,1.83022538565218,2.71965487990169,4.05859211738608,2.9021994498929,0.954670618015114,0.790839983952838,0.609958401380546,0.432021363287205,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0.388844919875379,0,0,0.149516546043979,0.330916980914195,0.388902376688095,0.129159823477731,0,0.117357238645754,0.2604087696879,0.104859344425711,0,0.576060012515731,0.632022241256357,6.28448167399509,3.90301637226344,2.20865399062252,2.14832034800978,1.98681354781265,0.600977247599844,0.886137163047463,0.302899349844443,0.457240839929999,0.604957110821043,0.194915761479505,0.577271049841977,0.467507608726276,0,0,0.0897138566094757,0.335769232728157,0.386379188064381,2.064507229963,0,0.214368379079066,0,796.300098090064,709.821514694067,713.254914232049,446.990127275931,578.894729206193,654.92650903687,560.943697692631,490.399790311176,493.472083383799,567.983061991746,0.31136204275253,1.19707462020309,0.170733605754134,0.486213434136588,0.419226325255965,1.83843508450014,0.44449345560323,0.824140228955577,1.28367683836726,2.02157769411038,2.02783439912192,0.565879024158229,1.591905626988,1.08842759088278,1.03383844120104,0.952587382566147,0.927074607558844,2.50781986602817,0.824171801606613,1.47198920134397,0.685738504770831,0.70990322463735,0.715308569841963,1.45346416632329,1.31753132581463,0.761531471025089,0.914639864363863,0.789209134313529,0.679020569229309,1.12228454331548,1.30498519936592,0.886540341380071,0.818462086339379,0.77468420592983,0.771626443924566,1.99848462350357,1.16965804222704,1.50409737833809,0.191288332068843,1.32354851471709,0.463735671240843
|phase1_expression=0,0,0,0,0,3.18970616632591,2.33612640595526,0.129123323441576,0.281577444303333,0,0,0,0,0.0874204024189974,0.999329285446988,0.404950534779652,0,2.99689057090326,0.959801035240171,0.84877930359606,40.3955628217581,32.2695591402877,24.0303806007821,0.95995453676044,1.14704640533585,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0.221730510655305,2.54012269383853,3.69038872550742,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.699932108126813,0,1.17447824240415,0,0,0,0,0,1.82084814773638,2.11596391708813,0.633831403506179,3.04960078862219,2.66788438833342,0,0,0,0.599200221036809,0,0.207379224616955,0.405017814995072,1.26194976810829,6.56997264128748,7.50953039235486,2.69479758272899,1.82106394934649,0.919218786610021,29.731287869835,49.670374515138,31.4893393175299,0.527545150920775,1.64677758484337,3.12548022334056,8.09630697104005,24.7615548413939,42.1723163863996,6.18720029494702,3.41692033917847,0.372798891650601,0.227178579999552,0,0,0,0,0,0,0,10.6737759300131,0,0,0,0,0,0,0,0,0,0,5.82337786567206,1.8125651855302,0,0.173485326766136,0.304465478312141,0.461230994512117,0.301445281105245,0.117588707135705,0.376999773989026,0.247194967734374,1.3013942122792,4.42305275974937,0.485300549842228,0.662524555381181,1.45462575940567,0,0.585561594023094,0.628340120440365,1.53274233125155,0.838705871541442,1.19980546198682,1.52484272487678,66.9564158139557,243.390320699509,14.9528679014309,379.284666659547,433.693415632241,29.5059023274575,121.031982248547,0.611036183101898,1.36847667671102,1.26361379216837,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.476255494059295,0.2562274405697,0.468508622798644,1.29351685369508,0.431135985865684,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,1.0447564995665,0.61734640922383,0.59710280045548,0,0.257347907114715,0.568326998791185,0.207125772535502,0.469052119962192,0.900310307305074,0.23674473558521,0,0.154267112887378,0,0.536546802799238,0,0,0,0.324275238183423,0.292399974850665,0.658650345873152,0.671032093801859,332.047828782757,19.9634948015812,0.660837565967596,0.264450566663544,0.639864751605702,0.464473343720877,0.257734922644187,0.403367049246685,0.444756087689741,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,2.69645822596266,0,0.199141273254367,0.758671603812327,0.228497025219458,1.1270773567308,0.203651327845314,0,0.0701358198903186,0.189709611372772,0.590440591918409,0.31399745568275,0.246794327843601,0.296452627087149,4.00428253718626,3.14494392181125,2.47348323623339,1.21716072833102,0.72353147925725,0.763877555344259,1.72617682470486,0.972811360650212,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0,0,0.923765950833023,1.13694847062291,0.814824882210129,0.339490171550376,0,0.167506257441816,0.238043640886014,0.195133647857799,0.788175720530955,0.44292937929755,0.478364305972461,0.491589944147214,0.863424909329478,1.01254341007058,0,0,0,0.275936746304732,4.33486592967038,3.16471553798949,0.163934945376675,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0,50.1261253618019,0.709700426041343,1.24645922567079,1.14020871547503,0.164970122972535,0,0.485561272309963,0,0,0.295301892880773,0.307435147943927,0,0,0,0.632073515871632,0,0,0.680879211507576,0.720244376125241,0.388076051348264,0.428674070063185,0.177340233642274,0.356737635204141,0.329098041204242,0.304464949114599,7.97883807416615,5.71946591332314,0,0,0,0.120625849856312,0.358117032009409,0.164140899745061,0.582961673259701,6.67531087237835,1.87957968877638,0.619160603889667,0.555583582109135,1.31857919903284,1.91371918809435,1.83022538565218,2.71965487990169,4.05859211738608,2.9021994498929,0.954670618015114,0.790839983952838,0.609958401380546,0.432021363287205,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0.388844919875379,0,0,0.149516546043979,0.330916980914195,0.388902376688095,0.129159823477731,0,0.117357238645754,0.2604087696879,0.104859344425711,0,0.576060012515731,0.632022241256357,6.28448167399509,3.90301637226344,2.20865399062252,2.14832034800978,1.98681354781265,0.600977247599844,0.886137163047463,0.302899349844443,0.457240839929999,0.604957110821043,0.194915761479505,0.577271049841977,0.467507608726276,0,0,0.0897138566094757,0.335769232728157,0.386379188064381,2.064507229963,0,0.214368379079066,0,796.300098090064,709.821514694067,713.254914232049,446.990127275931,578.894729206193,654.92650903687,560.943697692631,490.399790311176,493.472083383799,567.983061991746,0.31136204275253,1.19707462020309,0.170733605754134,0.486213434136588,0.419226325255965,1.83843508450014,0.44449345560323,0.824140228955577,1.28367683836726,2.02157769411038,2.02783439912192,0.565879024158229,1.591905626988,1.08842759088278,1.03383844120104,0.952587382566147,0.927074607558844,2.50781986602817,0.824171801606613,1.47198920134397,0.685738504770831,0.70990322463735,0.715308569841963,1.45346416632329,1.31753132581463,0.761531471025089,0.91463986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|short_description=p2@Nrgn
}}
}}

Latest revision as of 14:52, 26 September 2015

Short description:p2@Nrgn
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nrgn_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 3bp_to_ENSMUST00000065668, NM_022029, uc009ovc.1_5end
EntrezGene:Nrgn
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Nrgn

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A340.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H232.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I924.03
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D329.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F349.67
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D731.49
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E524.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I642.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.82
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.52
corpora quadrigemina, adult.CNhs10501.16-22A466.96
corpus striatum, adult.CNhs10487.19-21D8243.39
corpus striatum, neonate N00.CNhs11226.630-43F114.95
cortex, adult.CNhs10473.12-14D5379.28
cortex, neonate N30.CNhs11107.1392-42F2433.69
diencephalon, adult.CNhs10482.20-12F229.51
diencephalon, neonate N30.CNhs11201.1388-42B2121.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E8332.05
hippocampus, neonate N00.CNhs11228.627-43G119.96
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F84.00
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I950.13
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I77.98
placenta, adult pregnant day17.CNhs10464.577-18G35.72
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C96.68
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.90
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I46.28
thymus, embryo E15.CNhs11005.430-45I23.90
thymus, embryo E16.CNhs11002.456-26C52.21
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1796.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2709.82
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3713.25
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7446.99
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4578.89
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5654.93
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6560.94
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7490.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8493.47
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9567.98
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.92e-0823
neuroblast (sensu Vertebrata)4.92e-0823

Uber anatomy
Ontology termp-valuen
gray matter3.08e-1734
regional part of nervous system7.84e-1654
brain grey matter4.89e-1529
regional part of telencephalon4.89e-1529
telencephalon4.89e-1529
neural tube3.22e-1452
neural rod3.22e-1452
future spinal cord3.22e-1452
neural keel3.22e-1452
anterior neural tube3.36e-1240
brain3.67e-1247
future brain3.67e-1247
occipital lobe5.41e-1210
visual cortex5.41e-1210
neocortex5.41e-1210
central nervous system8.97e-1273
regional part of forebrain2.02e-1139
forebrain2.02e-1139
future forebrain2.02e-1139
regional part of brain2.03e-1146
regional part of cerebral cortex3.97e-1117
nervous system4.17e-1175
cerebral cortex1.34e-1021
cerebral hemisphere1.34e-1021
pallium1.34e-1021
neurectoderm4.85e-1064
neural plate4.85e-1064
presumptive neural plate4.85e-1064
pre-chordal neural plate5.78e-0949
ecto-epithelium1.83e-0773
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