FFCP PHASE1:Mm9::chr12:40925847..40925853,-: Difference between revisions
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{{FFCP|EntrezGene=380755|HGNC=|MCL_coexpression_id=19|UniProt=Q3UQS2,B2RVW5|association_with_transcript=48bp_to_ENSMUST00000095760,ENSMUST00000101468,NM_001033437,uc007nkx.1,uc011ylo.1,uc011ylp.1_5end|description=CAGE_peak_7_at_Gm889_5end|id=chr12:40925847..40925853,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!6.46e-27!18;UBERON:0000948!6.46e-27!18;UBERON:0005498!6.46e-27!18;UBERON:0004140!6.46e-27!18;UBERON:0009881!6.46e-27!18;UBERON:0004141!6.46e-27!18;UBERON:0003084!6.46e-27!18;UBERON:0007005!6.46e-27!18;UBERON:0004139!6.46e-27!18;UBERON:0004291!6.46e-27!18;UBERON:0004535!3.49e-20!23;UBERON:0001009!3.49e-20!23;UBERON:0003103!4.06e-13!43;UBERON:0004872!7.24e-13!33;UBERON:0003914!6.56e-08!47|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.13e-38,18;UBERON:0000948,1.13e-38,18;UBERON:0005498,1.13e-38,18;UBERON:0004140,1.13e-38,18;UBERON:0009881,1.13e-38,18;UBERON:0004141,1.13e-38,18;UBERON:0003084,1.13e-38,18;UBERON:0007005,1.13e-38,18;UBERON:0004139,1.13e-38,18;UBERON:0004291,1.13e-38,18;UBERON:0004535,2.59e-30,23;UBERON:0001009,2.59e-30,23;UBERON:0004872,3.59e-21,33;UBERON:0003103,2.91e-16,43;UBERON:0003914,7.01e-15,47;UBERON:0003081,5.32e-08,87;UBERON:0010314,1.48e-07,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2562274405697,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0.828503090142008,0.703578179943289,0.900310307305074,0.710234206755631,1.96764231747404,2.62254091908543,1.86027155800326,1.07309360559848,1.16765342367169,1.31647879930784,2.29834449710733,0.648550476366846,1.02339991197733,0.439100230582101,0.671032093801859,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0.192423683280659,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.44449345560323,0,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0,0.282328141245992,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0|short_description=p7@Gm889}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=380755 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UQS2,B2RVW5 | |||
|association_with_transcript=48bp_to_ENSMUST00000095760,ENSMUST00000101468,NM_001033437,uc007nkx.1,uc011ylo.1,uc011ylp.1_5end | |||
|cluster_id=chr12:40925847..40925853,- | |||
|description=CAGE_peak_7_at_Gm889_5end | |||
|id=chr12:40925847..40925853,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!6.46e-27!18;UBERON:0000948!6.46e-27!18;UBERON:0005498!6.46e-27!18;UBERON:0004140!6.46e-27!18;UBERON:0009881!6.46e-27!18;UBERON:0004141!6.46e-27!18;UBERON:0003084!6.46e-27!18;UBERON:0007005!6.46e-27!18;UBERON:0004139!6.46e-27!18;UBERON:0004291!6.46e-27!18;UBERON:0004535!3.49e-20!23;UBERON:0001009!3.49e-20!23;UBERON:0003103!4.06e-13!43;UBERON:0004872!7.24e-13!33;UBERON:0003914!6.56e-08!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.13e-38,18;UBERON:0000948,1.13e-38,18;UBERON:0005498,1.13e-38,18;UBERON:0004140,1.13e-38,18;UBERON:0009881,1.13e-38,18;UBERON:0004141,1.13e-38,18;UBERON:0003084,1.13e-38,18;UBERON:0007005,1.13e-38,18;UBERON:0004139,1.13e-38,18;UBERON:0004291,1.13e-38,18;UBERON:0004535,2.59e-30,23;UBERON:0001009,2.59e-30,23;UBERON:0004872,3.59e-21,33;UBERON:0003103,2.91e-16,43;UBERON:0003914,7.01e-15,47;UBERON:0003081,5.32e-08,87;UBERON:0010314,1.48e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2562274405697,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0.828503090142008,0.703578179943289,0.900310307305074,0.710234206755631,1.96764231747404,2.62254091908543,1.86027155800326,1.07309360559848,1.16765342367169,1.31647879930784,2.29834449710733,0.648550476366846,1.02339991197733,0.439100230582101,0.671032093801859,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0.192423683280659,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.44449345560323,0,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0,0.282328141245992,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p7@Gm889 | |||
}} |
Latest revision as of 14:47, 26 September 2015
Short description: | p7@Gm889 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Gm889_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 48bp_to_ENSMUST00000095760, ENSMUST00000101468, NM_001033437, uc007nkx.1, uc011ylo.1, uc011ylp.1_5end |
EntrezGene: | Gm889 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.13e-38 | 18 |
heart | 1.13e-38 | 18 |
primitive heart tube | 1.13e-38 | 18 |
primary heart field | 1.13e-38 | 18 |
anterior lateral plate mesoderm | 1.13e-38 | 18 |
heart tube | 1.13e-38 | 18 |
heart primordium | 1.13e-38 | 18 |
cardiac mesoderm | 1.13e-38 | 18 |
cardiogenic plate | 1.13e-38 | 18 |
heart rudiment | 1.13e-38 | 18 |
cardiovascular system | 2.59e-30 | 23 |
circulatory system | 2.59e-30 | 23 |
splanchnic layer of lateral plate mesoderm | 3.59e-21 | 33 |
compound organ | 2.91e-16 | 43 |
epithelial tube | 7.01e-15 | 47 |
lateral plate mesoderm | 5.32e-08 | 87 |
structure with developmental contribution from neural crest | 1.48e-07 | 92 |