FFCP PHASE1:Mm9::chr2:32631289..32631311,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:32631289..32631311,+ to FFCP PHASE1:Mm9::chr2:32631289..32631311,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=329384 | |EntrezGene=329384 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BW00,E9PZ40 | |UniProt=Q8BW00,E9PZ40 | ||
|association_with_transcript=0bp_to_ENSMUST00000066352,ENSMUST00000100180_5end | |||
|cluster_id=chr2:32631289..32631311,+ | |||
|description=CAGE_peak_2_at_Ptrh1_5end | |||
|id=chr2:32631289..32631311,+ | |||
|ontology_enrichment_celltype=CL:0000548!5.20e-14!115;CL:0000004!5.20e-14!115;CL:0000255!5.20e-14!115;CL:0002371!2.32e-12!118;CL:0000144!4.05e-11!121;CL:0000012!4.05e-11!121;CL:0002321!1.01e-10!70;CL:0000220!1.01e-10!70;CL:0000055!3.13e-08!50;CL:0000333!3.13e-07!10;CL:0000095!3.13e-07!10;CL:0000243!3.13e-07!10;CL:0000123!3.13e-07!10;CL:0000125!3.13e-07!10;CL:0000030!3.13e-07!10;CL:0000339!3.13e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.33e-13,70;CL:0000333,6.87e-08,10;CL:0000095,6.87e-08,10;CL:0000243,6.87e-08,10;CL:0000123,6.87e-08,10;CL:0000125,6.87e-08,10;CL:0000030,6.87e-08,10;CL:0000339,6.87e-08,10;CL:0000221,4.21e-07,44;CL:0000133,4.21e-07,44;CL:0002319,6.69e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!1.37e-10!99;UBERON:0007811!6.64e-08!86;UBERON:0000073!7.00e-08!75;UBERON:0001016!7.00e-08!75;UBERON:0001017!4.83e-07!73;UBERON:0005743!4.83e-07!73;UBERON:0000072!7.35e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.15e-08,75;UBERON:0000072,2.35e-07,27;UBERON:0001017,3.34e-07,73 | |||
|phase1_expression=1.92178616525753,6.63053274514786,3.63999391511629,2.72217790176147,2.00358291978539,2.85394762250213,3.03696432774183,1.67860320474049,1.267098499365,0.936258105287974,9.07455231595176,7.73789942254763,0.684802919724823,1.31130603628496,1.66554880907831,1.41732687172878,0,1.41957974411207,1.09691546884591,2.12194825899015,1.44573593256819,1.39007331681239,0.261199789138935,3.51983330145495,2.98232065387321,6.89078356938024,1.29228598847722,3.23206849028834,1.14014051673824,1.00812051903972,5.09980174507201,5.08024538767705,4.30545351309199,0,2.02196133825892,3.65716219788683,1.42918549383658,0,0,0.523523743973798,0,0,0,1.76255545165808,2.63580021170738,1.83546752161682,4.69434806608824,5.23260375313072,3.73466510648602,4.86074747685709,2.93971485413261,5.75010257459886,0.167782606057736,1.45072428402269,0.336093799142464,1.54355661621568,2.29226751951005,4.64104883049698,1.41621522601718,0.528990979272033,0.633831403506179,5.76035704517525,0.889294796111139,3.1496490104849,4.94433181283487,5.6838409195688,3.29560121570245,3.45796474789399,0.829516898467821,1.4850653216486,1.05162480675691,1.42825492201902,2.65042249141936,1.10241719293459,1.0543001812006,2.75765635983006,1.10115880999389,1.40456071893706,2.15049146558741,1.58263545276233,1.9212405156506,1.56274011167028,2.23346399201105,1.12552522006336,2.59757021220577,0.883885756421003,1.70846016958924,1.4911955666024,8.25415507331706,4.00529268565963,0.289864488701678,1.72084775396277,2.719885334831,1.07940638327563,0,0,0.842666520790511,1.36344258062446,4.1565760736459,5.65343319216544,1.69012103732017,1.28326477414318,5.09610479413291,0,3.030874574157,2.53359865475099,2.52762222507392,1.25602267690966,0.517875767294343,2.07818994690755,0.693941307064543,0.913396434936424,0.691846491768175,1.05505848386836,0.587943535678524,0.879666139307728,0.741584903203122,0.722996784599558,0,0.647067399789637,0.883366073841574,0.969750506270444,5.59175283654366,0.585561594023094,0.628340120440365,1.27728527604296,0.838705871541442,2.99951365496704,0.635351135365324,0.599162557619291,1.37250180845588,2.26177833803156,1.91206752211504,1.79000820131231,1.24672826735736,1.62241263067758,1.12023300235348,0.497627882440372,1.0108910337347,0.420883711772948,0.260240885925407,2.29902104433473,0.720248519221397,1.05493372485001,0.680364991513279,0.512454881139399,0.937017245597288,0,0,0.378212160335639,1.58356011747554,1.31517439456545,1.39023624612799,1.0447564995665,0.205782136407943,0.796137067273973,0.702213187313235,0.257347907114715,1.42081749697796,1.44988040774851,0.938104239924385,1.2604344302271,0.710234206755631,0.787056926989615,0.462801338662135,1.16266972375204,1.3413670069981,0.700592054203017,1.15191894939436,0.820837320395476,0.648550476366846,0.730999937126662,0.658650345873152,0.402619256281115,1.05144974282064,0.720332286654991,0.991256348951394,2.3800550999719,0.853153002140936,0.696710015581316,0.515469845288373,0.80673409849337,0,0.951128130562796,1.42358718463353,1.64698954724011,1.50801125280162,0.795825888164603,1.16978452271472,0.898819408654221,0.864552199498777,1.7922714592893,0.758671603812327,0.114248512609729,0,0.610953983535943,1.55161989734101,0.771494018793504,1.20149420536089,0.885660887877613,0.470996183524124,2.22114895059241,0,0.667380422864376,0.589676985339609,0.899448449539415,0.405720242777006,0.241177159752417,0.763877555344259,0,0.324270453550071,0.549122826376163,0,0.744281895337007,0.936113019343682,0,1.07638448113147,1.4473305640901,0.923765950833023,1.70542270593436,0.814824882210129,1.52770577197669,1.64283173801951,0.670025029767263,0.714130922658041,0.585400943573396,0.157635144106191,0.44292937929755,0.478364305972461,0.327726629431476,1.03610989119537,0.433947175744535,0,1.08781136763742,0,0.275936746304732,0.642202359951168,0.820481806145422,0.983609672260053,0.757412781613119,1.26203287766503,1.95219372148319,1.50796378412959,1.19484398976276,0.222798674082394,1.69845918473299,2.02405350837447,1.16902343164525,0,1.28528526568723,0.709700426041343,0.534196811001766,0.81443479676788,0.659880491890142,0,1.21390318077491,0.906970670894253,0.754420319023592,2.65771703592696,1.84461088766356,1.55056975900933,0.727067458955011,1.06949213515416,0.632073515871632,1.05418608574999,1.03135543248187,1.36175842301515,1.8006109403131,1.16422815404479,2.35770738534752,1.41872186913819,1.07021290561242,0.658196082408484,1.2178597964584,1.64270195644597,0.847328283455281,0.441056796109924,0.65954501176592,0.322928853391811,0.904693873922338,0.596861720015682,1.64140899745061,1.1659233465194,0.741701208042039,0.341741761595705,0.206386867963223,0.740778109478847,0.188368457004691,0.27338845544205,0,0.339956859987711,0.559805809294632,0.414599921413271,0,0.316335993581135,0.609958401380546,0.648032044930808,1.46361807210128,0.436725127492355,1.07891477107857,0.247960367176008,0.523511883968059,2.07383957266869,0,1.69107881605257,0.747582730219894,1.32366792365678,0.777804753376191,0.904118764344118,1.01373675294467,0.5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| |phase1_expression=1.92178616525753,6.63053274514786,3.63999391511629,2.72217790176147,2.00358291978539,2.85394762250213,3.03696432774183,1.67860320474049,1.267098499365,0.936258105287974,9.07455231595176,7.73789942254763,0.684802919724823,1.31130603628496,1.66554880907831,1.41732687172878,0,1.41957974411207,1.09691546884591,2.12194825899015,1.44573593256819,1.39007331681239,0.261199789138935,3.51983330145495,2.98232065387321,6.89078356938024,1.29228598847722,3.23206849028834,1.14014051673824,1.00812051903972,5.09980174507201,5.08024538767705,4.30545351309199,0,2.02196133825892,3.65716219788683,1.42918549383658,0,0,0.523523743973798,0,0,0,1.76255545165808,2.63580021170738,1.83546752161682,4.69434806608824,5.23260375313072,3.73466510648602,4.86074747685709,2.93971485413261,5.75010257459886,0.167782606057736,1.45072428402269,0.336093799142464,1.54355661621568,2.29226751951005,4.64104883049698,1.41621522601718,0.528990979272033,0.633831403506179,5.76035704517525,0.889294796111139,3.1496490104849,4.94433181283487,5.6838409195688,3.29560121570245,3.45796474789399,0.829516898467821,1.4850653216486,1.05162480675691,1.42825492201902,2.65042249141936,1.10241719293459,1.0543001812006,2.75765635983006,1.10115880999389,1.40456071893706,2.15049146558741,1.58263545276233,1.9212405156506,1.56274011167028,2.23346399201105,1.12552522006336,2.59757021220577,0.883885756421003,1.70846016958924,1.4911955666024,8.25415507331706,4.00529268565963,0.289864488701678,1.72084775396277,2.719885334831,1.07940638327563,0,0,0.842666520790511,1.36344258062446,4.1565760736459,5.65343319216544,1.69012103732017,1.28326477414318,5.09610479413291,0,3.030874574157,2.53359865475099,2.52762222507392,1.25602267690966,0.517875767294343,2.07818994690755,0.693941307064543,0.913396434936424,0.691846491768175,1.05505848386836,0.587943535678524,0.879666139307728,0.741584903203122,0.722996784599558,0,0.647067399789637,0.883366073841574,0.969750506270444,5.59175283654366,0.585561594023094,0.628340120440365,1.27728527604296,0.838705871541442,2.99951365496704,0.635351135365324,0.599162557619291,1.37250180845588,2.26177833803156,1.91206752211504,1.79000820131231,1.24672826735736,1.62241263067758,1.12023300235348,0.497627882440372,1.0108910337347,0.420883711772948,0.260240885925407,2.29902104433473,0.720248519221397,1.05493372485001,0.680364991513279,0.512454881139399,0.937017245597288,0,0,0.378212160335639,1.58356011747554,1.31517439456545,1.39023624612799,1.0447564995665,0.205782136407943,0.796137067273973,0.702213187313235,0.257347907114715,1.42081749697796,1.44988040774851,0.938104239924385,1.2604344302271,0.710234206755631,0.787056926989615,0.462801338662135,1.16266972375204,1.3413670069981,0.700592054203017,1.15191894939436,0.820837320395476,0.648550476366846,0.730999937126662,0.658650345873152,0.402619256281115,1.05144974282064,0.720332286654991,0.991256348951394,2.3800550999719,0.853153002140936,0.696710015581316,0.515469845288373,0.80673409849337,0,0.951128130562796,1.42358718463353,1.64698954724011,1.50801125280162,0.795825888164603,1.16978452271472,0.898819408654221,0.864552199498777,1.7922714592893,0.758671603812327,0.114248512609729,0,0.610953983535943,1.55161989734101,0.771494018793504,1.20149420536089,0.885660887877613,0.470996183524124,2.22114895059241,0,0.667380422864376,0.589676985339609,0.899448449539415,0.405720242777006,0.241177159752417,0.763877555344259,0,0.324270453550071,0.549122826376163,0,0.744281895337007,0.936113019343682,0,1.07638448113147,1.4473305640901,0.923765950833023,1.70542270593436,0.814824882210129,1.52770577197669,1.64283173801951,0.670025029767263,0.714130922658041,0.585400943573396,0.157635144106191,0.44292937929755,0.478364305972461,0.327726629431476,1.03610989119537,0.433947175744535,0,1.08781136763742,0,0.275936746304732,0.642202359951168,0.820481806145422,0.983609672260053,0.757412781613119,1.26203287766503,1.95219372148319,1.50796378412959,1.19484398976276,0.222798674082394,1.69845918473299,2.02405350837447,1.16902343164525,0,1.28528526568723,0.709700426041343,0.534196811001766,0.81443479676788,0.659880491890142,0,1.21390318077491,0.906970670894253,0.754420319023592,2.65771703592696,1.84461088766356,1.55056975900933,0.727067458955011,1.06949213515416,0.632073515871632,1.05418608574999,1.03135543248187,1.36175842301515,1.8006109403131,1.16422815404479,2.35770738534752,1.41872186913819,1.07021290561242,0.658196082408484,1.2178597964584,1.64270195644597,0.847328283455281,0.441056796109924,0.65954501176592,0.322928853391811,0.904693873922338,0.596861720015682,1.64140899745061,1.1659233465194,0.741701208042039,0.341741761595705,0.206386867963223,0.740778109478847,0.188368457004691,0.27338845544205,0,0.339956859987711,0.559805809294632,0.414599921413271,0,0.316335993581135,0.609958401380546,0.648032044930808,1.46361807210128,0.436725127492355,1.07891477107857,0.247960367176008,0.523511883968059,2.07383957266869,0,1.69107881605257,0.747582730219894,1.32366792365678,0.777804753376191,0.904118764344118,1.01373675294467,0.5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| ||
|short_description=p2@Ptrh1 | |||
}} | }} |
Latest revision as of 14:46, 26 September 2015
Short description: | p2@Ptrh1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ptrh1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000066352, ENSMUST00000100180_5end |
EntrezGene: | Ptrh1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.33e-13 | 70 |
migratory neural crest cell | 6.87e-08 | 10 |
neuron associated cell | 6.87e-08 | 10 |
glial cell (sensu Vertebrata) | 6.87e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 6.87e-08 | 10 |
glial cell | 6.87e-08 | 10 |
glioblast | 6.87e-08 | 10 |
glioblast (sensu Vertebrata) | 6.87e-08 | 10 |
ectodermal cell | 4.21e-07 | 44 |
neurectodermal cell | 4.21e-07 | 44 |
neural cell | 6.69e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.15e-08 | 75 |
segment of respiratory tract | 2.35e-07 | 27 |
central nervous system | 3.34e-07 | 73 |