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FFCP PHASE1:Mm9::chr10:93774641..93774687,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=319880
|EntrezGene=319880
|HGNC=
|HGNC=
|MCL_coexpression_id=41
|MCL_coexpression_id=41
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-6bp_to_ENSMUST00000147869,uc007gvs.1_5end
|association_with_transcript=-6bp_to_ENSMUST00000147869,uc007gvs.1_5end
|cluster_id=chr10:93774641..93774687,+
|description=CAGE_peak_4_at_Tmcc3_5end
|description=CAGE_peak_4_at_Tmcc3_5end
|id=chr10:93774641..93774687,+
|id=chr10:93774641..93774687,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!5.13e-12!52;UBERON:0005068!5.13e-12!52;UBERON:0006241!5.13e-12!52;UBERON:0007135!5.13e-12!52;UBERON:0000033!8.40e-12!63;UBERON:0007811!1.82e-11!86;UBERON:0000153!2.22e-11!94;UBERON:0002346!3.26e-11!71;UBERON:0003075!3.26e-11!71;UBERON:0007284!3.26e-11!71;UBERON:0002616!4.76e-11!49;UBERON:0000955!5.12e-11!50;UBERON:0006238!5.12e-11!50;UBERON:0004121!9.64e-11!102;UBERON:0000924!9.64e-11!102;UBERON:0006601!9.64e-11!102;UBERON:0001017!1.61e-09!73;UBERON:0005743!1.61e-09!73;UBERON:0000073!3.52e-09!75;UBERON:0001016!3.52e-09!75;UBERON:0003056!5.52e-09!49;UBERON:0003080!3.74e-08!40;UBERON:0002020!8.58e-08!34;UBERON:0002780!1.23e-07!39;UBERON:0001890!1.23e-07!39;UBERON:0006240!1.23e-07!39
|ontology_enrichment_uberon=UBERON:0001049!5.13e-12!52;UBERON:0005068!5.13e-12!52;UBERON:0006241!5.13e-12!52;UBERON:0007135!5.13e-12!52;UBERON:0000033!8.40e-12!63;UBERON:0007811!1.82e-11!86;UBERON:0000153!2.22e-11!94;UBERON:0002346!3.26e-11!71;UBERON:0003075!3.26e-11!71;UBERON:0007284!3.26e-11!71;UBERON:0002616!4.76e-11!49;UBERON:0000955!5.12e-11!50;UBERON:0006238!5.12e-11!50;UBERON:0004121!9.64e-11!102;UBERON:0000924!9.64e-11!102;UBERON:0006601!9.64e-11!102;UBERON:0001017!1.61e-09!73;UBERON:0005743!1.61e-09!73;UBERON:0000073!3.52e-09!75;UBERON:0001016!3.52e-09!75;UBERON:0003056!5.52e-09!49;UBERON:0003080!3.74e-08!40;UBERON:0002020!8.58e-08!34;UBERON:0002780!1.23e-07!39;UBERON:0001890!1.23e-07!39;UBERON:0006240!1.23e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.45e-14,54;UBERON:0001049,2.02e-12,52;UBERON:0005068,2.02e-12,52;UBERON:0006241,2.02e-12,52;UBERON:0007135,2.02e-12,52;UBERON:0002346,3.47e-11,64;UBERON:0003075,3.47e-11,64;UBERON:0007284,3.47e-11,64;UBERON:0002616,2.28e-09,46;UBERON:0000955,5.12e-09,47;UBERON:0006238,5.12e-09,47;UBERON:0001017,7.07e-09,73;UBERON:0010371,1.19e-08,73;UBERON:0001016,2.14e-08,75;UBERON:0003080,1.67e-07,40;UBERON:0003056,1.84e-07,49;UBERON:0004121,2.65e-07,95;UBERON:0000924,2.65e-07,95;UBERON:0006601,2.65e-07,95;UBERON:0002020,3.73e-07,34;UBERON:0002780,8.48e-07,39;UBERON:0001890,8.48e-07,39;UBERON:0006240,8.48e-07,39
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.388859798148567,0.839918529752175,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,0,0,0.210324961351382,1.71390590642282,0.883474163806454,0.489963196859816,0.383381884072945,0.919218786610021,3.30347642998166,5.2351808614927,3.84016333140609,0.263772575460388,0.182975287204819,0.52091337055676,1.3959149950069,3.37657566019008,3.66715794664344,2.94628585473668,1.56608848879013,1.67759501242771,0.075726193333184,0.151143120213571,1.15945795480671,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0.505524445014783,0.91347103775248,1.8125651855302,2.52351636410202,0.173485326766136,0,1.15307748628029,0.301445281105245,0.705532242814229,0.125666591329675,0.741584903203122,1.44599356919912,0,0,0,0,1.86391761218122,1.17112318804619,1.46612694769419,0.255457055208591,0.239630249011841,0,0,4.79330046095433,3.66000482254901,2.26177833803156,1.91206752211504,1.53429274398198,6.2336413367868,5.67844420737152,0,0.746441823660558,2.77995034277042,2.73574412652416,0,0.229902104433473,0.360124259610698,0.150704817835715,0.884474488967262,0.768682321709099,1.12442069471675,6.72628763921441,0,0,0.175951124163949,0.219195732427575,0.278047249225598,1.39300866608867,0.823128545631774,0,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0,0,0.16455984991348,0.32833492815819,0.324275238183423,0,0.658650345873152,0.134206418760372,1.68231958851302,0.411618449517138,0,0.264450566663544,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0.814605311381257,0.581857461502877,1.26244475802573,2.78240763346732,3.24742325555125,6.12295038581362,5.55287237648102,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,6.28160846566456,0,0,0,0,0.167506257441816,0.476087281772027,0.975668239288994,1.57635144106191,1.10732344824387,3.18909537314974,9.01248230936559,8.28887912956299,7.95569822198314,0,1.08781136763742,0,0.275936746304732,6.26147300952389,4.45404409050372,0,0.252470927204373,0,0,0,0,0,0,0.809621403349789,0.876767573733936,0,0.321321316421807,0.851640511249612,0,0,0.824850614862677,1.32745138339963,0.242780636154981,0.302323556964751,0,0.295301892880773,0.922305443831782,1.29214146584111,0,0,0.316036757935816,0,0,9.53230896110606,0,0.129358683782755,0.214337035031592,0.709360934569094,1.07021290561242,0.822745103010605,2.74018454203139,0.23467170806371,0.21183207086382,0.220528398054962,0.16488625294148,0.968786560175433,0.301564624640779,0.477489376012546,0.656563598980245,0,5.37733375830478,0,0,0,0,0.136694227721025,0,1.35982743995084,0.559805809294632,0.276399947608848,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,1.21377911746339,1.73572257023205,2.35580347785627,0.90730481304255,118.054469486516,1.12738587736838,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0,0.483168241652012,0.576060012515731,2.21207784439725,0.405450430580328,0.513554785824136,1.16928740680016,2.32734704367726,1.98681354781265,1.08175904567972,0.886137163047463,1.11063094942962,0.685861259894999,1.00826185136841,1.16949456887703,0.865906574762965,1.98690733708667,0.226730383615211,0,0,0,4.25017106870819,0,0.183151624267265,0.214368379079066,0,1.6942555278512,2.30162618253588,1.14579102687879,1.3748254587495,0.685082519770642,1.5107877947794,2.70009000092722,0.900642406448441,2.26571204492102,1.03552062350364,0.103787347584177,0.399024873401031,0.682934423016537,0.243106717068294,0.419226325255965,0.551530525350042,0.666740183404846,0.206035057238894,0.962757628775446,0.758091635291392,0.50695859978048,0.565879024158229,0.468207537349412,0.768301828858431,0.34461281373368,0,0.927074607558844,1.15745532278223,1.64834360321323,0.147198920134397,0.685738504770831,0.354951612318675,1.43061713968393,1.0174249164263,0.846984423737976,0.846146078916765,0.365855945745545,1.05227884575137,0.407412341537585,1.12228454331548,0.474540072496697,0.394017929502254,0,0.929621047115796,1.15743966588685,1.74867404556562,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.388859798148567,0.839918529752175,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,0,0,0.210324961351382,1.71390590642282,0.883474163806454,0.489963196859816,0.383381884072945,0.919218786610021,3.30347642998166,5.2351808614927,3.84016333140609,0.263772575460388,0.182975287204819,0.52091337055676,1.3959149950069,3.37657566019008,3.66715794664344,2.94628585473668,1.56608848879013,1.67759501242771,0.075726193333184,0.151143120213571,1.15945795480671,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0.505524445014783,0.91347103775248,1.8125651855302,2.52351636410202,0.173485326766136,0,1.15307748628029,0.301445281105245,0.705532242814229,0.125666591329675,0.741584903203122,1.44599356919912,0,0,0,0,1.86391761218122,1.17112318804619,1.46612694769419,0.255457055208591,0.239630249011841,0,0,4.79330046095433,3.66000482254901,2.26177833803156,1.91206752211504,1.53429274398198,6.2336413367868,5.67844420737152,0,0.746441823660558,2.77995034277042,2.73574412652416,0,0.229902104433473,0.360124259610698,0.150704817835715,0.884474488967262,0.768682321709099,1.12442069471675,6.72628763921441,0,0,0.175951124163949,0.219195732427575,0.278047249225598,1.39300866608867,0.823128545631774,0,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0,0,0.16455984991348,0.32833492815819,0.324275238183423,0,0.658650345873152,0.134206418760372,1.68231958851302,0.411618449517138,0,0.264450566663544,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0.814605311381257,0.581857461502877,1.26244475802573,2.78240763346732,3.24742325555125,6.12295038581362,5.55287237648102,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,6.28160846566456,0,0,0,0,0.167506257441816,0.476087281772027,0.975668239288994,1.57635144106191,1.10732344824387,3.18909537314974,9.01248230936559,8.28887912956299,7.95569822198314,0,1.08781136763742,0,0.275936746304732,6.26147300952389,4.45404409050372,0,0.252470927204373,0,0,0,0,0,0,0.809621403349789,0.876767573733936,0,0.321321316421807,0.851640511249612,0,0,0.824850614862677,1.32745138339963,0.242780636154981,0.302323556964751,0,0.295301892880773,0.922305443831782,1.29214146584111,0,0,0.316036757935816,0,0,9.53230896110606,0,0.129358683782755,0.214337035031592,0.709360934569094,1.07021290561242,0.822745103010605,2.74018454203139,0.23467170806371,0.21183207086382,0.220528398054962,0.16488625294148,0.968786560175433,0.301564624640779,0.477489376012546,0.656563598980245,0,5.37733375830478,0,0,0,0,0.136694227721025,0,1.35982743995084,0.559805809294632,0.276399947608848,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,1.21377911746339,1.73572257023205,2.35580347785627,0.90730481304255,118.054469486516,1.12738587736838,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0,0.483168241652012,0.576060012515731,2.21207784439725,0.405450430580328,0.513554785824136,1.16928740680016,2.32734704367726,1.98681354781265,1.08175904567972,0.886137163047463,1.11063094942962,0.685861259894999,1.00826185136841,1.16949456887703,0.865906574762965,1.98690733708667,0.226730383615211,0,0,0,4.25017106870819,0,0.183151624267265,0.214368379079066,0,1.6942555278512,2.30162618253588,1.14579102687879,1.3748254587495,0.685082519770642,1.5107877947794,2.70009000092722,0.900642406448441,2.26571204492102,1.03552062350364,0.103787347584177,0.399024873401031,0.682934423016537,0.243106717068294,0.419226325255965,0.551530525350042,0.666740183404846,0.206035057238894,0.962757628775446,0.758091635291392,0.50695859978048,0.565879024158229,0.468207537349412,0.768301828858431,0.34461281373368,0,0.927074607558844,1.15745532278223,1.64834360321323,0.147198920134397,0.685738504770831,0.354951612318675,1.43061713968393,1.0174249164263,0.846984423737976,0.846146078916765,0.365855945745545,1.05227884575137,0.407412341537585,1.12228454331548,0.474540072496697,0.394017929502254,0,0.929621047115796,1.15743966588685,1.74867404556562,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421
|short_description=p4@Tmcc3
|short_description=p4@Tmcc3
}}
}}

Latest revision as of 14:41, 26 September 2015

Short description:p4@Tmcc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Tmcc3_5end
Coexpression cluster:MCL_coexpression_mm9:41
Association with transcript: -6bp_to_ENSMUST00000147869, uc007gvs.1_5end
EntrezGene:Tmcc3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Tmcc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.79
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F26.23
diencephalon, neonate N30.CNhs11201.1388-42B25.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G71.26
kidney, neonate N10.CNhs11206.758-6D52.78
kidney, neonate N20.CNhs11113.832-19I13.25
kidney, neonate N25.CNhs11122.1353-25F36.12
kidney, neonate N30.CNhs11203.1385-42H15.55
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B16.28
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E63.19
lung, neonate N20.CNhs11109.822-18A49.01
lung, neonate N25.CNhs11119.1359-25C78.29
lung, neonate N30.CNhs11133.1394-42H27.96
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C26.26
medulla oblongata, neonate N30.CNhs11200.1396-42A34.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G89.53
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.74
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C1118.05
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G21.99
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E44.25
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.45e-1454
neural tube2.02e-1252
neural rod2.02e-1252
future spinal cord2.02e-1252
neural keel2.02e-1252
neurectoderm3.47e-1164
neural plate3.47e-1164
presumptive neural plate3.47e-1164
regional part of brain2.28e-0946
brain5.12e-0947
future brain5.12e-0947
central nervous system7.07e-0973
ecto-epithelium1.19e-0873
nervous system2.14e-0875
anterior neural tube1.67e-0740
pre-chordal neural plate1.84e-0749
ectoderm-derived structure2.65e-0795
ectoderm2.65e-0795
presumptive ectoderm2.65e-0795
gray matter3.73e-0734
regional part of forebrain8.48e-0739
forebrain8.48e-0739
future forebrain8.48e-0739
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