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FFCP PHASE1:Mm9::chr6:122436476..122436574,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=108653
|EntrezGene=108653
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-136bp_to_ENSMUST00000079990_5end
|association_with_transcript=-136bp_to_ENSMUST00000079990_5end
|cluster_id=chr6:122436476..122436574,-
|description=CAGE_peak_1_at_Rimklb_5end
|description=CAGE_peak_1_at_Rimklb_5end
|id=chr6:122436476..122436574,-
|id=chr6:122436476..122436574,-
|ontology_enrichment_celltype=CL:0000540!1.55e-15!33;CL:0000047!1.55e-15!33;CL:0000031!1.55e-15!33;CL:0000404!1.55e-15!33;CL:0000117!6.30e-15!23;CL:0000337!6.30e-15!23;CL:0000221!5.57e-13!44;CL:0000133!5.57e-13!44;CL:0002319!2.16e-12!43;CL:0000393!2.56e-10!39;CL:0000211!2.56e-10!39;CL:0000055!4.73e-08!50
|ontology_enrichment_celltype=CL:0000540!1.55e-15!33;CL:0000047!1.55e-15!33;CL:0000031!1.55e-15!33;CL:0000404!1.55e-15!33;CL:0000117!6.30e-15!23;CL:0000337!6.30e-15!23;CL:0000221!5.57e-13!44;CL:0000133!5.57e-13!44;CL:0002319!2.16e-12!43;CL:0000393!2.56e-10!39;CL:0000211!2.56e-10!39;CL:0000055!4.73e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.08e-17,23;CL:0000337,2.08e-17,23;CL:0000540,7.70e-17,33;CL:0000047,7.70e-17,33;CL:0000031,7.70e-17,33;CL:0000404,7.70e-17,33;CL:0000221,4.20e-14,44;CL:0000133,4.20e-14,44;CL:0002319,2.01e-13,43;CL:0000393,3.53e-12,39;CL:0000211,3.53e-12,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.91e-24!73;UBERON:0005743!5.91e-24!73;UBERON:0000073!2.64e-22!75;UBERON:0001016!2.64e-22!75;UBERON:0002346!1.82e-19!71;UBERON:0003075!1.82e-19!71;UBERON:0007284!1.82e-19!71;UBERON:0004121!2.80e-19!102;UBERON:0000924!2.80e-19!102;UBERON:0006601!2.80e-19!102;UBERON:0000033!3.61e-19!63;UBERON:0003056!3.73e-18!49;UBERON:0001049!4.19e-18!52;UBERON:0005068!4.19e-18!52;UBERON:0006241!4.19e-18!52;UBERON:0007135!4.19e-18!52;UBERON:0000955!9.68e-16!50;UBERON:0006238!9.68e-16!50;UBERON:0002616!2.10e-15!49;UBERON:0002020!1.07e-14!34;UBERON:0003080!1.86e-14!40;UBERON:0002780!3.77e-14!39;UBERON:0001890!3.77e-14!39;UBERON:0006240!3.77e-14!39;UBERON:0000153!6.78e-12!94;UBERON:0002791!2.03e-11!29;UBERON:0003528!2.03e-11!29;UBERON:0001893!2.03e-11!29;UBERON:0007811!6.70e-11!86;UBERON:0000468!1.28e-08!333;UBERON:0000956!5.52e-08!21;UBERON:0001869!5.52e-08!21;UBERON:0000203!5.52e-08!21;UBERON:0000922!2.60e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.06e-24,73;UBERON:0001016,2.41e-23,75;UBERON:0002346,5.93e-23,64;UBERON:0003075,5.93e-23,64;UBERON:0007284,5.93e-23,64;UBERON:0004121,7.94e-23,95;UBERON:0000924,7.94e-23,95;UBERON:0006601,7.94e-23,95;UBERON:0000073,3.16e-20,54;UBERON:0010371,8.04e-20,73;UBERON:0001049,1.73e-19,52;UBERON:0005068,1.73e-19,52;UBERON:0006241,1.73e-19,52;UBERON:0007135,1.73e-19,52;UBERON:0003056,2.89e-19,49;UBERON:0002020,8.78e-16,34;UBERON:0000955,1.29e-15,47;UBERON:0006238,1.29e-15,47;UBERON:0002616,3.13e-15,46;UBERON:0003080,5.82e-15,40;UBERON:0002780,1.34e-14,39;UBERON:0001890,1.34e-14,39;UBERON:0006240,1.34e-14,39;UBERON:0010314,6.78e-13,92;UBERON:0003528,5.40e-12,29;UBERON:0002791,5.40e-12,29;UBERON:0001893,5.40e-12,29;UBERON:0000956,1.84e-08,21;UBERON:0001869,1.84e-08,21;UBERON:0000203,1.84e-08,21;UBERON:0000922,4.45e-07,320
|phase1_expression=10.089377367602,0,0,0.60492842261366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92445281484804,0,0.194429899074283,0.699932108126813,1.43752564364972,0,0,0,0,0,0,15.3760510253294,7.40587370980846,14.5781222806421,0,0,0,0,0,2.09720077362883,4.99483796918021,19.1825782770684,17.1457541681247,15.1433972172995,17.1390590642282,13.693849539,18.0061474845982,20.7984672109573,22.9804696652505,2.20231761998777,3.19218345212969,4.91540906419979,14.2437190748609,18.0230657896747,19.7947080811569,4.74611098302348,2.8138130501584,5.95913166329559,14.4368006882097,17.7964600998879,13.7935589910722,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,10.7040999030277,0,0,0,0,0,0,0,0,0,2.60227990149204,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0,0.884610551949874,0,0,0,0,1.17112318804619,1.46612694769419,0,0,0,0,3.14560342750128,0.457500602818626,9.5497307605777,1.73824320192276,1.53429274398198,1.87009240103604,2.92034273521964,2.34230536855727,0.995255764880744,1.0108910337347,1.47309299120532,8.32770834961304,2.5289231487682,4.32149111532838,5.57607825992146,4.69451844144162,6.79002717509704,6.93392761741993,2.32833033665114,5.82033580918674,5.29497024469894,5.98233822157426,4.16471891612392,3.89266148915837,0.348252166522167,0,6.96619933864726,0,0,0,1.65700618028402,0.469052119962192,1.80062061461015,0.473489471170421,0.787056926989615,0.771335564436891,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0,0.146199987425332,0,0,1.47202963994889,7.30622747892919,0,0,6.18535926552179,6.0381534683714,1.28867461322093,1.00841762311671,0.667134131534611,0.380451252225118,0,0.494096864172033,0.754005626400808,0.596869416123452,0.19496408711912,0,0,0,1.70701110857774,5.48392860526698,2.25415471346161,3.25842124552503,3.87904974335251,1.54298803758701,2.52946148497029,0.442830443938806,0,0.123397163921801,0,0.333690211432188,0.589676985339609,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,2.27389694124582,3.7481944581666,3.90413697282933,4.22442446919304,1.50755631697634,0,0.195133647857799,0.788175720530955,0.44292937929755,0.797273843287435,0,0.172684981865896,0,0,0,0,0,1.9266070798535,2.69586879162067,0,0,0.94652465824877,0.390438744296638,3.01592756825919,1.91175038362042,2.45078541490634,3.39691836946599,1.21443210502468,1.16902343164525,2.76701444562566,3.21321316421807,2.98074178937364,1.95872164033981,3.58351310577867,1.81467135269789,0,1.69946445308487,3.32555912661226,0.377210159511796,0,0,0.516856586336442,0.363533729477506,0,0,0,0,2.04263763452273,9.90336017172206,4.2688365648309,5.14408884075822,4.25616560741457,1.24858172321449,4.27827453565514,0.913394847343798,0.704015124191131,0.63549621259146,3.74898276693435,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,3.70850604021019,0,1.03193433981611,0.740778109478847,0.188368457004691,0,0,0,0,0,0,3.63786392618306,3.25311147402958,2.05210147561422,1.46361807210128,0.218362563746178,0.674321731924103,0.0826534557253359,0,0,0,10.1464728963154,3.28936401296753,3.47462829959905,2.33341426012857,1.29159823477731,0.844780627453891,0.234714477291508,2.8644964665669,4.29923312145414,15.2197996120384,8.64090018773596,0,1.82452693761148,2.56777392912068,1.03936658382236,0.895133478337407,0.39736270956253,0.360586348559907,0.295379054349154,0.100966449948148,0.228620419965,0,0.0974578807397524,0.288635524920988,0,0,0,0.179427713218951,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,3.3885110557024,2.30162618253588,6.30185064783336,6.01486138202907,2.74033007908257,6.7985450765073,6.75022500231806,4.05289082901798,0.906284817968409,5.1776031175182,6.43481555021895,11.1726964552289,3.75613932659095,3.16038732188782,2.09613162627982,1.47074806760011,1.55572709461131,1.64828045791115,0.320919209591815,2.52697211763797,1.2673964994512,0.754505365544305,1.591905626988,1.28050304809739,1.83793500657962,1.42888107384922,1.0429589335037,1.92909220463705,1.64834360321323,1.03039244094078,2.05721551431249,1.77475806159337,2.86123427936785,1.45346416632329,1.50575008664529,1.52306294205018,1.46342378298218,3.41990624869196,2.8518863907631,0.561142271657738,0.711810108745045,2.46261205938909,3.6830793885272,0.77468420592983,2.50778594275484,2.74791635731741,0.467863216890817,0.644613162144895,0.956441660344217,0.441182838239031,0.231867835620421
|phase1_expression=10.089377367602,0,0,0.60492842261366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92445281484804,0,0.194429899074283,0.699932108126813,1.43752564364972,0,0,0,0,0,0,15.3760510253294,7.40587370980846,14.5781222806421,0,0,0,0,0,2.09720077362883,4.99483796918021,19.1825782770684,17.1457541681247,15.1433972172995,17.1390590642282,13.693849539,18.0061474845982,20.7984672109573,22.9804696652505,2.20231761998777,3.19218345212969,4.91540906419979,14.2437190748609,18.0230657896747,19.7947080811569,4.74611098302348,2.8138130501584,5.95913166329559,14.4368006882097,17.7964600998879,13.7935589910722,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,10.7040999030277,0,0,0,0,0,0,0,0,0,2.60227990149204,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0,0.884610551949874,0,0,0,0,1.17112318804619,1.46612694769419,0,0,0,0,3.14560342750128,0.457500602818626,9.5497307605777,1.73824320192276,1.53429274398198,1.87009240103604,2.92034273521964,2.34230536855727,0.995255764880744,1.0108910337347,1.47309299120532,8.32770834961304,2.5289231487682,4.32149111532838,5.57607825992146,4.69451844144162,6.79002717509704,6.93392761741993,2.32833033665114,5.82033580918674,5.29497024469894,5.98233822157426,4.16471891612392,3.89266148915837,0.348252166522167,0,6.96619933864726,0,0,0,1.65700618028402,0.469052119962192,1.80062061461015,0.473489471170421,0.787056926989615,0.771335564436891,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0,0.146199987425332,0,0,1.47202963994889,7.30622747892919,0,0,6.18535926552179,6.0381534683714,1.28867461322093,1.00841762311671,0.667134131534611,0.380451252225118,0,0.494096864172033,0.754005626400808,0.596869416123452,0.19496408711912,0,0,0,1.70701110857774,5.48392860526698,2.25415471346161,3.25842124552503,3.87904974335251,1.54298803758701,2.52946148497029,0.442830443938806,0,0.123397163921801,0,0.333690211432188,0.589676985339609,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,2.27389694124582,3.7481944581666,3.90413697282933,4.22442446919304,1.50755631697634,0,0.195133647857799,0.788175720530955,0.44292937929755,0.797273843287435,0,0.172684981865896,0,0,0,0,0,1.9266070798535,2.69586879162067,0,0,0.94652465824877,0.390438744296638,3.01592756825919,1.91175038362042,2.45078541490634,3.39691836946599,1.21443210502468,1.16902343164525,2.76701444562566,3.21321316421807,2.98074178937364,1.95872164033981,3.58351310577867,1.81467135269789,0,1.69946445308487,3.32555912661226,0.377210159511796,0,0,0.516856586336442,0.363533729477506,0,0,0,0,2.04263763452273,9.90336017172206,4.2688365648309,5.14408884075822,4.25616560741457,1.24858172321449,4.27827453565514,0.913394847343798,0.704015124191131,0.63549621259146,3.74898276693435,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,3.70850604021019,0,1.03193433981611,0.740778109478847,0.188368457004691,0,0,0,0,0,0,3.63786392618306,3.25311147402958,2.05210147561422,1.46361807210128,0.218362563746178,0.674321731924103,0.0826534557253359,0,0,0,10.1464728963154,3.28936401296753,3.47462829959905,2.33341426012857,1.29159823477731,0.844780627453891,0.234714477291508,2.8644964665669,4.29923312145414,15.2197996120384,8.64090018773596,0,1.82452693761148,2.56777392912068,1.03936658382236,0.895133478337407,0.39736270956253,0.360586348559907,0.295379054349154,0.100966449948148,0.228620419965,0,0.0974578807397524,0.288635524920988,0,0,0,0.179427713218951,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,3.3885110557024,2.30162618253588,6.30185064783336,6.01486138202907,2.74033007908257,6.7985450765073,6.75022500231806,4.05289082901798,0.906284817968409,5.1776031175182,6.43481555021895,11.1726964552289,3.75613932659095,3.16038732188782,2.09613162627982,1.47074806760011,1.55572709461131,1.64828045791115,0.320919209591815,2.52697211763797,1.2673964994512,0.754505365544305,1.591905626988,1.28050304809739,1.83793500657962,1.42888107384922,1.0429589335037,1.92909220463705,1.64834360321323,1.03039244094078,2.05721551431249,1.77475806159337,2.86123427936785,1.45346416632329,1.50575008664529,1.52306294205018,1.46342378298218,3.41990624869196,2.8518863907631,0.561142271657738,0.711810108745045,2.46261205938909,3.6830793885272,0.77468420592983,2.50778594275484,2.74791635731741,0.467863216890817,0.644613162144895,0.956441660344217,0.441182838239031,0.231867835620421
|short_description=p1@Rimklb
|short_description=p1@Rimklb
}}
}}

Latest revision as of 14:37, 26 September 2015

Short description:p1@Rimklb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rimklb_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -136bp_to_ENSMUST00000079990_5end
EntrezGene:Rimklb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rimklb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C315.38
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D519.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F517.15
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D915.14
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.69
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.01
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F220.80
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.98
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D819.79
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.96
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.44
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.79
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F19.55
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C68.33
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C94.32
eyeball, embryo E17.CNhs11023.1261-18D45.58
eyeball, neonate N00.CNhs11207.633-15C64.69
eyeball, neonate N01.CNhs11140.1532-43E76.79
eyeball, neonate N02.CNhs11205.1551-44G86.93
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E25.82
forelimb, embryo E12.CNhs10600.359-14H25.29
forelimb, embryo E13.CNhs10589.384-1E25.98
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I66.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G17.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I56.19
intestine, embryo E13.CNhs11010.381-16D56.04
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F85.48
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C73.88
kidney, neonate N00.CNhs11214.646-21G71.54
kidney, neonate N10.CNhs11206.758-6D52.53
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F83.75
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B64.22
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E69.90
pituitary gland, embryo E13.CNhs11009.370-44C74.27
pituitary gland, embryo E14.CNhs11037.398-44A55.14
pituitary gland, embryo E15.CNhs10592.427-16B94.26
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F83.75
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.64
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G510.15
testis, embryo E13.CNhs11031.389-23F53.29
testis, embryo E15.CNhs11034.443-27C53.47
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I42.86
testis, neonate N10.CNhs11204.763-44D94.30
testis, neonate N20.CNhs11110.839-18H315.22
testis, neonate N30.CNhs11130.1391-42E28.64
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I22.57
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.01
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I86.43
whole body, embryo E12.CNhs10587.857-27C911.17
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.08e-1723
neuroblast (sensu Vertebrata)2.08e-1723
neuron7.70e-1733
neuronal stem cell7.70e-1733
neuroblast7.70e-1733
electrically signaling cell7.70e-1733
ectodermal cell4.20e-1444
neurectodermal cell4.20e-1444
neural cell2.01e-1343
electrically responsive cell3.53e-1239
electrically active cell3.53e-1239

Uber anatomy
Ontology termp-valuen
central nervous system1.06e-2473
nervous system2.41e-2375
neurectoderm5.93e-2364
neural plate5.93e-2364
presumptive neural plate5.93e-2364
ectoderm-derived structure7.94e-2395
ectoderm7.94e-2395
presumptive ectoderm7.94e-2395
regional part of nervous system3.16e-2054
ecto-epithelium8.04e-2073
neural tube1.73e-1952
neural rod1.73e-1952
future spinal cord1.73e-1952
neural keel1.73e-1952
pre-chordal neural plate2.89e-1949
gray matter8.78e-1634
brain1.29e-1547
future brain1.29e-1547
regional part of brain3.13e-1546
anterior neural tube5.82e-1540
regional part of forebrain1.34e-1439
forebrain1.34e-1439
future forebrain1.34e-1439
structure with developmental contribution from neural crest6.78e-1392
brain grey matter5.40e-1229
regional part of telencephalon5.40e-1229
telencephalon5.40e-1229
cerebral cortex1.84e-0821
cerebral hemisphere1.84e-0821
pallium1.84e-0821
embryo4.45e-07320
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