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FFCP PHASE1:Mm9::chr10:93498473..93498514,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=215008
|EntrezGene=215008
|HGNC=
|HGNC=
|MCL_coexpression_id=1260
|TSSclassifier=NA
|UniProt=Q3ZK22
|UniProt=Q3ZK22
|association_with_transcript=0bp_to_ENSMUST00000047711,ENSMUST00000092214,ENSMUST00000118205,ENSMUST00000132735,NM_172538,uc007gvh.1,uc007gvj.1,uc007gvk.1,uc007gvl.1_5end
|association_with_transcript=0bp_to_ENSMUST00000047711,ENSMUST00000092214,ENSMUST00000118205,ENSMUST00000132735,NM_172538,uc007gvh.1,uc007gvj.1,uc007gvk.1,uc007gvl.1_5end
|cluster_id=chr10:93498473..93498514,-
|description=CAGE_peak_1_at_Vezt_5end
|description=CAGE_peak_1_at_Vezt_5end
|id=chr10:93498473..93498514,-
|id=chr10:93498473..93498514,-
|ontology_enrichment_celltype=CL:0000117!2.87e-10!23;CL:0000337!2.87e-10!23;CL:0000540!1.00e-07!33;CL:0000047!1.00e-07!33;CL:0000031!1.00e-07!33;CL:0000404!1.00e-07!33;CL:0000393!6.65e-07!39;CL:0000211!6.65e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,2.87e-10,23;CL:0000337,2.87e-10,23;CL:0000540,1.00e-07,33;CL:0000047,1.00e-07,33;CL:0000031,1.00e-07,33;CL:0000404,1.00e-07,33;CL:0000393,6.65e-07,39;CL:0000211,6.65e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!1.17e-19!94;UBERON:0003056!5.15e-18!49;UBERON:0007811!2.40e-17!86;UBERON:0001049!4.62e-17!52;UBERON:0005068!4.62e-17!52;UBERON:0006241!4.62e-17!52;UBERON:0007135!4.62e-17!52;UBERON:0000033!8.23e-17!63;UBERON:0003080!1.76e-16!40;UBERON:0000955!2.95e-16!50;UBERON:0006238!2.95e-16!50;UBERON:0002780!4.87e-16!39;UBERON:0001890!4.87e-16!39;UBERON:0006240!4.87e-16!39;UBERON:0001017!9.78e-16!73;UBERON:0005743!9.78e-16!73;UBERON:0002616!1.14e-15!49;UBERON:0000073!3.62e-15!75;UBERON:0001016!3.62e-15!75;UBERON:0002020!4.86e-15!34;UBERON:0000025!1.18e-14!114;UBERON:0002346!1.52e-14!71;UBERON:0003075!1.52e-14!71;UBERON:0007284!1.52e-14!71;UBERON:0004121!4.53e-14!102;UBERON:0000924!4.53e-14!102;UBERON:0006601!4.53e-14!102;UBERON:0000477!1.05e-13!154;UBERON:0004111!2.19e-13!122;UBERON:0002791!2.95e-13!29;UBERON:0003528!2.95e-13!29;UBERON:0001893!2.95e-13!29;UBERON:0000956!1.32e-10!21;UBERON:0001869!1.32e-10!21;UBERON:0000203!1.32e-10!21;UBERON:0000475!1.40e-09!200;UBERON:0000483!1.76e-08!181;UBERON:0000119!1.98e-08!183;UBERON:0002619!2.18e-08!17;UBERON:0002021!8.61e-08!10;UBERON:0000411!8.61e-08!10;UBERON:0001950!8.61e-08!10;UBERON:0000479!3.93e-07!349
|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.15e-18,49;UBERON:0002346,7.38e-18,64;UBERON:0003075,7.38e-18,64;UBERON:0007284,7.38e-18,64;UBERON:0000073,1.36e-17,54;UBERON:0010314,1.46e-17,92;UBERON:0001049,4.62e-17,52;UBERON:0005068,4.62e-17,52;UBERON:0006241,4.62e-17,52;UBERON:0007135,4.62e-17,52;UBERON:0004121,1.66e-16,95;UBERON:0000924,1.66e-16,95;UBERON:0006601,1.66e-16,95;UBERON:0003080,1.76e-16,40;UBERON:0002780,4.87e-16,39;UBERON:0001890,4.87e-16,39;UBERON:0006240,4.87e-16,39;UBERON:0010371,5.85e-16,73;UBERON:0001017,9.78e-16,73;UBERON:0000955,1.83e-15,47;UBERON:0006238,1.83e-15,47;UBERON:0001016,3.62e-15,75;UBERON:0002020,4.86e-15,34;UBERON:0002616,6.98e-15,46;UBERON:0000025,1.18e-14,114;UBERON:0004111,2.19e-13,122;UBERON:0003528,2.95e-13,29;UBERON:0002791,2.95e-13,29;UBERON:0001893,2.95e-13,29;UBERON:0000956,1.32e-10,21;UBERON:0001869,1.32e-10,21;UBERON:0000203,1.32e-10,21;UBERON:0000483,1.06e-09,174;UBERON:0000119,1.22e-09,176;UBERON:0002619,2.18e-08,17;UBERON:0002021,8.61e-08,10;UBERON:0000411,8.61e-08,10;UBERON:0001950,8.61e-08,10;UBERON:0000479,3.93e-07,349
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219,16.4688768372747,13.5006676027252,15.0543573130417,12.6650286972783,14.4304850631758,13.5551667389551,6.28214260761671,4.66613903850454,10.5627683224777,4.50954350947352,11.5127740453864,8.43838301331198,11.2781689239548,10.074466231263,14.1923145412254,13.0266534896787,8.98410255423256,15.0997455973024,12.0792060413003,8.92893019399383,16.4325782726653,7.29810775044591,10.8873614594717,12.4723990058683,13.6060288707286,18.8747287042202,18.3899037765552,14.6212631902831,22.2126189885925,17.98480637058,19.7619322868207,17.4449606524157,15.5863183457334,18.5834274468695,16.3245876202952,7.99149432146633,9.50966880060442,6.04384618910682,11.9777548299958,11.2609485270709,16.1173429355193,13.9339446401393,13.0408747049194,37.2736216127264,43.2705722316746,45.2587455617123,34.8861960157686,28.0883833105963,26.4387864086395,40.5013500139084,30.621841819247,33.9856806738153,34.6899408873719,7.47268902606072,22.7444177838588,16.7318933639051,21.1502843849416,7.54607385460736,6.43452279575049,12.8903102124937,18.1310850370227,13.4786068028562,17.9415020352296,12.673964994512,14.3356019453418,15.91905626988,18.3111935877926,18.9537047553524,12.3836359733599,14.6014250690518,19.2909220463705,10.714233420886,14.4254941731709,14.057639347802,16.6827257789777,17.4058418661544,15.9881058295561,15.9985946706062,14.9767855968267,14.2683818840763,18.414879800649,16.5681018891951,15.1508413347589,15.0666473017701,14.3816544268323,15.1415485972785,15.4936841185966,15.2396222675102,20.4844673909116,12.6323068560521,13.3220053509945,17.2159498861959,11.6913452133343,12.9845987947436
|phase1_expression=8.64803774365887,3.48975407639361,6.82498859084304,3.93203474698879,5.50985302940982,5.03637815735669,7.94282978024787,14.9783055192228,20.8367308784467,25.2789688427753,10.2730780935303,13.6410391882025,11.9840510951844,14.4243663991346,7.32841475994458,9.51633756732182,4.19737126876888,8.67520954735154,8.63820931716154,8.91218268775863,14.7124891961351,8.24114894967348,7.57479388502913,7.83962871687693,4.12936705920906,3.44539178469012,2.58457197695445,5.60225204983311,5.89072600314759,2.77233142735924,7.76056787293567,6.35030673459631,7.99584223859941,15.8481681015439,4.91047753577167,5.98444723290572,6.32925004413344,1.25559489221072,3.1253413780952,0.523523743973798,1.17646297606203,1.36609096991689,1.94204141212461,17.877348152532,18.1464706882931,14.8672869250962,7.04152209913235,5.66865406589161,6.37089929929968,9.91592485278845,20.1580447140522,4.31257693094915,8.05356509077134,4.35217285206807,9.74672017513146,7.46052364504246,12.6074713573053,10.3134418455488,29.7405197463609,32.797440714866,37.3960528068646,9.82649143000483,16.0073063300005,1.7997994345628,2.96659908770092,5.6838409195688,4.49400165777607,3.45796474789399,27.2703680371296,27.1361936046698,24.6080204781117,16.5677570954206,16.565140571371,33.1950065872525,33.641760327401,33.0918763179608,14.3150645299205,22.2175968268227,22.2729473221553,34.5542073853108,45.7438218012048,31.2548022334056,11.725685958058,13.5063026407603,24.142123148736,31.2306300602088,26.7658759902314,29.6375118862228,12.1919171266426,11.1845908958043,18.2614627882057,8.60423876981386,4.0798280022465,5.39703191637817,6.49776417447669,8.51251085484938,9.55022056895913,31.3591793543626,17.6654483129951,17.666978725517,14.084341977668,16.6824420638613,17.8363667794652,7.11066703153331,9.52560580449342,7.34743609877786,10.1104889002957,7.9928715803342,21.2329064590681,9.20341262201914,11.1030609130327,11.5696881758614,8.07154240396205,10.0984169170257,13.9930561491489,5.78066320116507,20.517182321953,10.8449517689934,11.4999371753484,12.2942805960031,9.93786833071771,12.1218813283806,3.72783522436244,19.3235326027621,13.823482649688,6.38642638021478,5.63131085177825,5.39912457894067,4.95573885584952,21.12048015608,28.8225379775735,31.2879336761032,34.4172153980707,26.0829766476937,23.8956251243494,24.4984307232314,9.47106083807942,13.9335807083304,20.217820674694,14.0996043443938,17.0457780281142,10.5754968039398,19.2666478891724,22.3043130396858,19.0502197623718,19.0889443224426,18.8340466365055,23.5420067372504,11.8562396113063,20.2343505779567,20.762232651346,17.7548543266336,22.2437799380478,18.4573648256748,17.4914815946752,11.1459189418356,6.31991868581911,6.17634977075316,4.54661599032948,19.4698226183372,20.1692411583743,20.7071370680167,18.2293446400612,16.5281954667819,16.3523139660621,19.0677834695334,16.6329508867764,18.3321587516456,18.2661433403963,21.3417703302824,22.8614042919313,24.1229979251798,18.0031094538662,18.788898626452,24.3936340334388,25.1087254205454,6.60837565967596,5.28901133327089,15.1434657880016,16.2565670302307,12.1135413642768,13.9161631990106,7.78323153457046,7.79925067061493,6.64340686162316,6.58795818896044,10.8074139784116,9.15199771389294,7.40863531052657,5.39291645192533,7.5648317456143,7.96565093017469,15.7424357791058,14.2810640762161,20.2873924211545,14.0519416213267,12.8008641530633,10.8710520829994,13.8488016302123,8.56138858281692,9.26292494264111,8.76119863844784,8.59712618552732,13.1807633515714,12.1866576970186,14.1663130802458,11.3601667977562,10.1294407096015,8.40265310878685,12.9463261852865,13.2950885955529,11.2570179407113,18.6898668485561,11.1642284300551,11.2333562321242,10.8608917517258,9.32866550313943,8.20153986317724,17.9210594461607,11.5589761179996,20.3706220552532,18.3324692637203,19.4792906079457,22.2783322397615,14.7587057349329,11.1226179278945,20.3349335896986,15.9454576547118,18.8156627015835,15.8947415274266,14.5055384767352,14.6095549167327,10.5553898757491,5.98296252200581,6.39293554924747,7.72622889653251,18.4633178485961,16.6440594960929,12.131185957874,15.4007265594668,10.7272794601527,13.2749173060857,12.9254038639679,15.0550342710108,16.2643032080148,11.0399847007645,11.7395103485719,16.9508397588561,15.8115111178609,30.2042037436499,17.1747503102005,9.08134578703002,8.63300884573953,12.7026994688852,7.96470830039777,10.4395673546642,10.5813244937663,10.5618844663303,8.26845300066164,15.0643222492524,11.62927319257,15.6319503675327,9.9819265947722,12.6414703174326,8.4334886859999,7.21948802737308,20.4263763452273,15.4852540866927,18.8863678322822,19.7190072229065,20.3941268688615,20.155676389034,20.5686275752651,13.700922710157,14.7843176080138,18.0057260234247,6.83638033970382,14.6748765117917,16.6308359496783,17.4907482291652,16.7121281604391,13.6236946788401,6.70405924248657,18.542530201051,7.51831875510552,12.1768252098301,12.7784223885101,12.0555812483002,10.935538217682,9.83746144788047,4.58941760983409,6.01791244991729,5.11339903076368,9.54670618015114,16.449471666219,16.4688768372747,13.5006676027252,15.0543573130417,12.6650286972783,14.4304850631758,13.5551667389551,6.28214260761671,4.66613903850454,10.5627683224777,4.50954350947352,11.5127740453864,8.43838301331198,11.2781689239548,10.074466231263,14.1923145412254,13.0266534896787,8.98410255423256,15.0997455973024,12.0792060413003,8.92893019399383,16.4325782726653,7.29810775044591,10.8873614594717,12.4723990058683,13.6060288707286,18.8747287042202,18.3899037765552,14.6212631902831,22.2126189885925,17.98480637058,19.7619322868207,17.4449606524157,15.5863183457334,18.5834274468695,16.3245876202952,7.99149432146633,9.50966880060442,6.04384618910682,11.9777548299958,11.2609485270709,16.1173429355193,13.9339446401393,13.0408747049194,37.2736216127264,43.2705722316746,45.2587455617123,34.8861960157686,28.0883833105963,26.4387864086395,40.5013500139084,30.621841819247,33.9856806738153,34.6899408873719,7.47268902606072,22.7444177838588,16.7318933639051,21.1502843849416,7.54607385460736,6.43452279575049,12.8903102124937,18.1310850370227,13.4786068028562,17.9415020352296,12.673964994512,14.3356019453418,15.91905626988,18.3111935877926,18.9537047553524,12.3836359733599,14.6014250690518,19.2909220463705,10.714233420886,14.4254941731709,14.057639347802,16.6827257789777,17.4058418661544,15.9881058295561,15.9985946706062,14.9767855968267,14.2683818840763,18.414879800649,16.5681018891951,15.1508413347589,15.0666473017701,14.3816544268323,15.1415485972785,15.4936841185966,15.2396222675102,20.4844673909116,12.6323068560521,13.3220053509945,17.2159498861959,11.6913452133343,12.9845987947436
|short_description=p1@Vezt
|short_description=p1@Vezt
}}
}}

Latest revision as of 14:36, 26 September 2015

Short description:p1@Vezt
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Vezt_5end
Coexpression cluster:MCL_coexpression_mm9:1260
Association with transcript: 0bp_to_ENSMUST00000047711, ENSMUST00000092214, ENSMUST00000118205, ENSMUST00000132735, NM_172538, uc007gvh.1, uc007gvj.1, uc007gvk.1, uc007gvl.1_5end
EntrezGene:Vezt
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Vezt

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.65
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.94
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E914.98
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E720.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F225.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E610.27
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F113.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E411.98
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E814.42
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.52
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.64
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.91
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.71
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.24
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.13
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I25.60
Ileum epithelium, pool1.CNhs13199.10252-104B95.89
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.91
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D817.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D918.15
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B314.87
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.67
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.37
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C420.16
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A28.05
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.75
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.61
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C329.74
Mouse Granule cells, donor2.CNhs12357.11731-123E332.80
Mouse Granule cells, donor3.CNhs12108.11636-122C737.40
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.83
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25.68
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D527.27
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F527.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D924.61
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.57
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D233.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F233.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D633.09
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F322.22
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D722.27
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D434.55
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F445.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D831.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.73
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E513.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I624.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D631.23
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F626.77
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E129.64
Mouse Schwann, donor1.CNhs12507.11728-123D912.19
Mouse Schwann, donor2.CNhs12573.11746-123F911.18
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G318.26
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.51
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.55
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I731.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E317.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I817.67
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.08
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H116.68
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.35
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.11
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.99
accessory axillary lymph node, adult.CNhs10475.1063-29H921.23
adrenal gland, adult.CNhs10508.49-24D79.20
adrenal gland, embryo E14.CNhs11038.406-44C511.10
adrenal gland, embryo E16.CNhs11004.1254-43D611.57
adrenal gland, embryo E17.CNhs11043.1263-45I18.07
adrenal gland, embryo E18.CNhs11026.1262-18F510.10
adrenal gland, neonate N00.CNhs11191.1311-23C113.99
adrenal gland, neonate N25.CNhs11223.1377-27I35.78
amnion, adult pregnant day17.5.CNhs10488.583-22A820.52
aorta, adult.CNhs10498.46-23H110.84
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F512.29
bone (os femoris), neonate N16.CNhs11225.1525-43A69.94
bone (os femoris), neonate N20.CNhs11195.1350-25C312.12
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B219.32
cerebellum, neonate N30.CNhs11135.1395-42I213.82
colon, adult.CNhs10468.36-18H76.39
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.63
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.96
corpora quadrigemina, adult.CNhs10501.16-22A421.12
corpus striatum, adult.CNhs10487.19-21D828.82
corpus striatum, neonate N00.CNhs11226.630-43F131.29
cortex, adult.CNhs10473.12-14D534.42
cortex, neonate N30.CNhs11107.1392-42F226.08
diencephalon, adult.CNhs10482.20-12F223.90
diencephalon, neonate N30.CNhs11201.1388-42B224.50
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.47
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.93
epididymis, adult.CNhs10490.58-23B220.22
eyeball, adult.CNhs10484.31-12G414.10
eyeball, embryo E12.CNhs11016.345-16C617.05
eyeball, embryo E14.CNhs10521.399-16E210.58
eyeball, embryo E15.CNhs10593.426-16C919.27
eyeball, embryo E17.CNhs11023.1261-18D422.30
eyeball, neonate N00.CNhs11207.633-15C619.05
eyeball, neonate N01.CNhs11140.1532-43E719.09
eyeball, neonate N02.CNhs11205.1551-44G818.83
eyeball, neonate N16.CNhs11188.777-19A223.54
forelimb, embryo E11.CNhs10596.335-25E211.86
forelimb, embryo E12.CNhs10600.359-14H220.23
forelimb, embryo E13.CNhs10589.384-1E220.76
forelimb, embryo E14.CNhs10577.413-26A817.75
forelimb, embryo E15.CNhs11007.437-20E722.24
forelimb, embryo E17.CNhs10598.1517-43C418.46
forelimb, embryo E18.CNhs11008.1520-43B517.49
gonad, embryo E13.CNhs11044.1564-45I611.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.55
heart, embryo E11.CNhs10586.331-24E919.47
heart, embryo E12.CNhs11015.353-12F520.17
heart, embryo E13.CNhs11013.376-3I920.71
heart, embryo E14.CNhs10597.403-26D418.23
heart, embryo E15.CNhs11017.431-16C816.53
heart, embryo E16.CNhs11021.457-17C616.35
heart, embryo E17.CNhs11025.479-18E519.07
heart, embryo E18.CNhs11030.1283-20G316.63
heart, neonate N00.CNhs11213.639-21E318.33
heart, neonate N03.CNhs11221.1349-25I218.27
heart, neonate N10.CNhs11118.749-24G121.34
heart, neonate N16.CNhs11209.782-15G122.86
heart, neonate N20.CNhs11127.821-26I624.12
heart, neonate N25.CNhs11196.1351-25D318.00
heart, neonate N30.CNhs11202.1390-42D218.79
hippocampus, adult.CNhs10478.13-16E824.39
hippocampus, neonate N00.CNhs11228.627-43G125.11
intestinal mucosa, adult.CNhs10506.860-29I36.61
intestine, adult.CNhs10496.178-9A35.29
intestine, embryo E12.CNhs11019.1251-16I515.14
intestine, embryo E13.CNhs11010.381-16D516.26
intestine, embryo E15.CNhs10602.976-16D812.11
intestine, embryo E16.CNhs10585.463-22H413.92
intestine, embryo E17.CNhs10582.482-18D37.78
intestine, embryo E18.CNhs10526.1289-20F77.80
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E96.59
intestine, neonate N06.CNhs11102.688-20B810.81
intestine, neonate N07.CNhs11095.720-20F29.15
intestine, neonate N10.CNhs11098.755-23A57.41
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E37.56
intestine, neonate N30.CNhs11131.1384-42G17.97
kidney, embryo E14.CNhs10606.411-4I915.74
kidney, embryo E15.CNhs10997.434-16F814.28
kidney, embryo E16.CNhs10584.464-22A520.29
kidney, embryo E17.CNhs11028.483-18I214.05
kidney, embryo E18.CNhs11001.1288-20C712.80
kidney, neonate N00.CNhs11214.646-21G710.87
kidney, neonate N10.CNhs11206.758-6D513.85
kidney, neonate N20.CNhs11113.832-19I18.56
kidney, neonate N25.CNhs11122.1353-25F39.26
kidney, neonate N30.CNhs11203.1385-42H18.76
liver, adult pregnant day01.CNhs10466.508-5B28.60
liver, embryo E12.CNhs10601.355-15F813.18
liver, embryo E13.CNhs10524.378-3H612.19
liver, embryo E14.CNhs10594.409-16E114.17
liver, embryo E15.CNhs10520.433-16D711.36
liver, embryo E16.CNhs10523.462-17F510.13
liver, embryo E17.CNhs10510.481-18A38.40
liver, embryo E18.CNhs10579.499-43G412.95
liver, neonate N00.CNhs11117.641-24F413.30
liver, neonate N03.CNhs11123.1345-25G211.26
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H211.16
liver, neonate N10.CNhs11115.751-24B911.23
liver, neonate N20.CNhs11220.823-25A310.86
liver, neonate N25.CNhs11198.1368-26H19.33
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B117.92
lung, embryo E12.CNhs10522.354-16G211.56
lung, embryo E14.CNhs10604.404-26F820.37
lung, embryo E15.CNhs11020.432-17C518.33
lung, embryo E16.CNhs10998.458-17B619.48
lung, embryo E17.CNhs10605.480-44A622.28
lung, embryo E18.CNhs10583.1287-20I614.76
lung, neonate N00.CNhs11224.640-42C611.12
lung, neonate N06.CNhs11212.683-20E520.33
lung, neonate N07.CNhs11111.715-19A315.95
lung, neonate N10.CNhs11219.750-23E618.82
lung, neonate N20.CNhs11109.822-18A415.89
lung, neonate N25.CNhs11119.1359-25C714.51
lung, neonate N30.CNhs11133.1394-42H214.61
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.98
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H27.73
medulla oblongata, adult.CNhs10477.17-12C218.46
medulla oblongata, neonate N30.CNhs11200.1396-42A316.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C712.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C215.40
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.27
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.93
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.26
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.04
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.95
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.81
olfactory brain, adult.CNhs10489.18-22I930.20
ovary, adult.CNhs10507.91-2I717.17
ovary, embryo E18.CNhs11040.505-44H79.08
ovary, neonate N00.CNhs11217.1299-22I48.63
oviduct, adult pregnant day01.CNhs10500.988-6G612.70
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F410.44
pancreas, embryo E15.CNhs11042.1556-45F210.58
pancreas, embryo E16.CNhs11003.460-26E510.56
pancreas, embryo E17.CNhs10599.1558-45G38.27
pancreas, embryo E18.CNhs10580.1535-43I715.06
pancreas, neonate N00.CNhs11105.645-26G911.63
pancreas, neonate N01.CNhs11138.1531-43D715.63
pancreas, neonate N02.CNhs11139.1539-43D89.98
pancreas, neonate N16.CNhs11136.787-43B612.64
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G820.43
pituitary gland, embryo E12.CNhs11018.346-16E615.49
pituitary gland, embryo E13.CNhs11009.370-44C718.89
pituitary gland, embryo E14.CNhs11037.398-44A519.72
pituitary gland, embryo E15.CNhs10592.427-16B920.39
pituitary gland, embryo E16.CNhs11036.449-43F620.16
pituitary gland, embryo E17.CNhs11039.1265-44F520.57
pituitary gland, neonate N00.CNhs11190.1308-22E913.70
placenta, adult pregnant day10.CNhs10472.539-13I714.78
placenta, adult pregnant day17.CNhs10464.577-18G318.01
prostate, adult.CNhs10470.859-1F86.84
skin, adult.CNhs10492.30-1C314.67
skin, neonate N00.CNhs11124.650-25G416.63
skin, neonate N03.CNhs11215.662-22H317.49
skin, neonate N06.CNhs11097.693-20I516.71
skin, neonate N10.CNhs11108.762-6C413.62
small intestine, neonate N16.CNhs11114.790-21I16.70
spinal cord, adult.CNhs10505.24-13C918.54
spleen, adult.CNhs10465.25-2G27.52
spleen, embryo E16.CNhs11035.461-43C112.18
spleen, embryo E18.CNhs11011.1271-21F212.78
spleen, neonate N10.CNhs11116.752-24D112.06
spleen, neonate N20.CNhs11112.824-19H110.94
spleen, neonate N25.CNhs11099.1354-25G39.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.59
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.11
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E316.45
stomach, embryo E15.CNhs10603.1252-16G816.47
stomach, embryo E16.CNhs11022.459-17D413.50
stomach, embryo E17.CNhs11006.1035-18D515.05
stomach, embryo E18.CNhs10999.1286-20C612.67
stomach, neonate N03.CNhs11193.1340-24B814.43
stomach, neonate N07.CNhs11210.718-18A913.56
stomach, neonate N25.CNhs11104.1355-25E46.28
stomach, neonate N30.CNhs11134.1386-42I14.67
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F511.51
testis, embryo E15.CNhs11034.443-27C58.44
testis, embryo E16.CNhs11033.470-26G511.28
testis, embryo E17.CNhs11029.486-18I510.07
testis, embryo E18.CNhs11027.503-18G514.19
testis, neonate N00.CNhs11189.1300-22B713.03
testis, neonate N07.CNhs11222.726-26I48.98
testis, neonate N10.CNhs11204.763-44D915.10
testis, neonate N20.CNhs11110.839-18H312.08
testis, neonate N30.CNhs11130.1391-42E28.93
thymus, adult.CNhs10471.38-12B516.43
thymus, embryo E14.CNhs11041.402-44I47.30
thymus, embryo E15.CNhs11005.430-45I210.89
thymus, embryo E16.CNhs11002.456-26C512.47
thymus, embryo E17.CNhs10581.478-18C113.61
thymus, embryo E18.CNhs10595.1273-19G418.87
thymus, neonate N02.CNhs11181.1541-43F818.39
thymus, neonate N03.CNhs11137.2104-43C714.62
thymus, neonate N06.CNhs11197.681-26C422.21
thymus, neonate N07.CNhs11211.713-19D317.98
thymus, neonate N10.CNhs11194.748-24E419.76
thymus, neonate N20.CNhs11186.820-7A217.44
thymus, neonate N25.CNhs11125.1362-25G715.59
thymus, neonate N30.CNhs11132.1393-42G218.58
tongue, adult.CNhs10499.32-1B416.32
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.51
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.04
urinary bladder, adult.CNhs10481.879-12E411.98
uterus, adult pregnant day19.CNhs10497.590-15F511.26
uterus, adult.CNhs10509.92-27E516.12
vagina, adult.CNhs10502.89-27D513.93
vesicular gland, adult.CNhs10491.51-27F813.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A137.27
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A243.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A345.26
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D734.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.09
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A526.44
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A640.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A730.62
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A833.99
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A934.69
whole body, embryo E11.CNhs11014.324-5I87.47
whole body, embryo E12.CNhs10587.857-27C922.74
whole body, embryo E13.CNhs10512.372-23H216.73
whole body, embryo E14.5.CNhs10578.420-27D221.15
whole body, embryo E14.CNhs10519.395-14B17.55
whole body, embryo E16.CNhs10514.453-14F26.43
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.13
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.48
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G517.94
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.67
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G514.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.92
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.31
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G518.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.60
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G519.29
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.43
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G516.68
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.41
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.27
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.41
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.15
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.49
whole body, embryo E17.5.CNhs10513.490-9F915.24
whole body, embryo E17.CNhs10517.475-3I520.48
whole body, embryo E18.CNhs10516.493-3B312.63
whole body, neonate N00.CNhs10525.657-19C213.32
whole body, neonate N01.CNhs10576.659-23C617.22
whole body, neonate N06.CNhs10515.692-21D111.69
whole body, neonate N10.CNhs10518.761-6B412.98





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.87e-1023
neuroblast (sensu Vertebrata)2.87e-1023
neuron1.00e-0733
neuronal stem cell1.00e-0733
neuroblast1.00e-0733
electrically signaling cell1.00e-0733
electrically responsive cell6.65e-0739
electrically active cell6.65e-0739

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate5.15e-1849
neurectoderm7.38e-1864
neural plate7.38e-1864
presumptive neural plate7.38e-1864
regional part of nervous system1.36e-1754
structure with developmental contribution from neural crest1.46e-1792
neural tube4.62e-1752
neural rod4.62e-1752
future spinal cord4.62e-1752
neural keel4.62e-1752
ectoderm-derived structure1.66e-1695
ectoderm1.66e-1695
presumptive ectoderm1.66e-1695
anterior neural tube1.76e-1640
regional part of forebrain4.87e-1639
forebrain4.87e-1639
future forebrain4.87e-1639
ecto-epithelium5.85e-1673
central nervous system9.78e-1673
brain1.83e-1547
future brain1.83e-1547
nervous system3.62e-1575
gray matter4.86e-1534
regional part of brain6.98e-1546
tube1.18e-14114
anatomical conduit2.19e-13122
brain grey matter2.95e-1329
regional part of telencephalon2.95e-1329
telencephalon2.95e-1329
cerebral cortex1.32e-1021
cerebral hemisphere1.32e-1021
pallium1.32e-1021
epithelium1.06e-09174
cell layer1.22e-09176
regional part of cerebral cortex2.18e-0817
occipital lobe8.61e-0810
visual cortex8.61e-0810
neocortex8.61e-0810
tissue3.93e-07349
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