FFCP PHASE1:Mm9::chr12:3365290..3365359,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16570 | |EntrezGene=16570 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1605 | |MCL_coexpression_id=1605 | ||
|TSSclassifier=NA | |||
|UniProt=O35066,Q571A6 | |UniProt=O35066,Q571A6 | ||
|association_with_transcript=158bp_to_ENSMUST00000020999,ENSMUST00000168012,NM_008445,uc007mwm.1,uc007mwn.1_5end | |association_with_transcript=158bp_to_ENSMUST00000020999,ENSMUST00000168012,NM_008445,uc007mwm.1,uc007mwn.1_5end | ||
|cluster_id=chr12:3365290..3365359,+ | |||
|description=CAGE_peak_1_at_Kif3c_5end | |description=CAGE_peak_1_at_Kif3c_5end | ||
|id=chr12:3365290..3365359,+ | |id=chr12:3365290..3365359,+ | ||
|ontology_enrichment_celltype=CL:0000221!1.62e-21!44;CL:0000133!1.62e-21!44;CL:0002319!2.15e-21!43;CL:0000055!9.57e-21!50;CL:0000393!2.91e-17!39;CL:0000211!2.91e-17!39;CL:0000540!5.63e-17!33;CL:0000047!5.63e-17!33;CL:0000031!5.63e-17!33;CL:0000404!5.63e-17!33;CL:0000117!1.48e-12!23;CL:0000337!1.48e-12!23;CL:0002321!7.36e-09!70;CL:0000220!7.36e-09!70 | |ontology_enrichment_celltype=CL:0000221!1.62e-21!44;CL:0000133!1.62e-21!44;CL:0002319!2.15e-21!43;CL:0000055!9.57e-21!50;CL:0000393!2.91e-17!39;CL:0000211!2.91e-17!39;CL:0000540!5.63e-17!33;CL:0000047!5.63e-17!33;CL:0000031!5.63e-17!33;CL:0000404!5.63e-17!33;CL:0000117!1.48e-12!23;CL:0000337!1.48e-12!23;CL:0002321!7.36e-09!70;CL:0000220!7.36e-09!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.48e-21,44;CL:0000133,1.48e-21,44;CL:0002319,1.96e-21,43;CL:0000393,2.72e-17,39;CL:0000211,2.72e-17,39;CL:0000540,5.25e-17,33;CL:0000047,5.25e-17,33;CL:0000031,5.25e-17,33;CL:0000404,5.25e-17,33;CL:0000117,1.41e-12,23;CL:0000337,1.41e-12,23;CL:0002321,4.03e-09,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.39e-37!75;UBERON:0001016!3.39e-37!75;UBERON:0004121!3.24e-36!102;UBERON:0000924!3.24e-36!102;UBERON:0006601!3.24e-36!102;UBERON:0001017!1.54e-35!73;UBERON:0005743!1.54e-35!73;UBERON:0002346!6.37e-29!71;UBERON:0003075!6.37e-29!71;UBERON:0007284!6.37e-29!71;UBERON:0001049!5.35e-24!52;UBERON:0005068!5.35e-24!52;UBERON:0006241!5.35e-24!52;UBERON:0007135!5.35e-24!52;UBERON:0000033!5.87e-23!63;UBERON:0000955!8.35e-23!50;UBERON:0006238!8.35e-23!50;UBERON:0002616!2.17e-22!49;UBERON:0003056!3.59e-18!49;UBERON:0002020!7.58e-18!34;UBERON:0003080!8.43e-17!40;UBERON:0002780!3.61e-16!39;UBERON:0001890!3.61e-16!39;UBERON:0006240!3.61e-16!39;UBERON:0002791!5.22e-15!29;UBERON:0003528!5.22e-15!29;UBERON:0001893!5.22e-15!29;UBERON:0007811!4.55e-13!86;UBERON:0000153!1.02e-12!94;UBERON:0000956!6.03e-11!21;UBERON:0001869!6.03e-11!21;UBERON:0000203!6.03e-11!21;UBERON:0002619!4.41e-09!17;UBERON:0003076!6.83e-08!12;UBERON:0003057!6.83e-08!12;UBERON:0000010!2.84e-07!11 | |ontology_enrichment_uberon=UBERON:0000073!3.39e-37!75;UBERON:0001016!3.39e-37!75;UBERON:0004121!3.24e-36!102;UBERON:0000924!3.24e-36!102;UBERON:0006601!3.24e-36!102;UBERON:0001017!1.54e-35!73;UBERON:0005743!1.54e-35!73;UBERON:0002346!6.37e-29!71;UBERON:0003075!6.37e-29!71;UBERON:0007284!6.37e-29!71;UBERON:0001049!5.35e-24!52;UBERON:0005068!5.35e-24!52;UBERON:0006241!5.35e-24!52;UBERON:0007135!5.35e-24!52;UBERON:0000033!5.87e-23!63;UBERON:0000955!8.35e-23!50;UBERON:0006238!8.35e-23!50;UBERON:0002616!2.17e-22!49;UBERON:0003056!3.59e-18!49;UBERON:0002020!7.58e-18!34;UBERON:0003080!8.43e-17!40;UBERON:0002780!3.61e-16!39;UBERON:0001890!3.61e-16!39;UBERON:0006240!3.61e-16!39;UBERON:0002791!5.22e-15!29;UBERON:0003528!5.22e-15!29;UBERON:0001893!5.22e-15!29;UBERON:0007811!4.55e-13!86;UBERON:0000153!1.02e-12!94;UBERON:0000956!6.03e-11!21;UBERON:0001869!6.03e-11!21;UBERON:0000203!6.03e-11!21;UBERON:0002619!4.41e-09!17;UBERON:0003076!6.83e-08!12;UBERON:0003057!6.83e-08!12;UBERON:0000010!2.84e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.89e-37,75;UBERON:0001017,1.32e-35,73;UBERON:0004121,7.50e-34,95;UBERON:0000924,7.50e-34,95;UBERON:0006601,7.50e-34,95;UBERON:0002346,4.80e-27,64;UBERON:0003075,4.80e-27,64;UBERON:0007284,4.80e-27,64;UBERON:0000073,1.66e-25,54;UBERON:0001049,4.84e-24,52;UBERON:0005068,4.84e-24,52;UBERON:0006241,4.84e-24,52;UBERON:0007135,4.84e-24,52;UBERON:0010371,3.43e-23,73;UBERON:0000955,1.05e-20,47;UBERON:0006238,1.05e-20,47;UBERON:0002616,2.69e-20,46;UBERON:0010314,7.03e-20,92;UBERON:0003056,3.33e-18,49;UBERON:0002020,7.05e-18,34;UBERON:0003080,7.88e-17,40;UBERON:0002780,3.38e-16,39;UBERON:0001890,3.38e-16,39;UBERON:0006240,3.38e-16,39;UBERON:0003528,4.92e-15,29;UBERON:0002791,4.92e-15,29;UBERON:0001893,4.92e-15,29;UBERON:0000956,5.78e-11,21;UBERON:0001869,5.78e-11,21;UBERON:0000203,5.78e-11,21;UBERON:0002619,4.26e-09,17;UBERON:0003076,6.64e-08,12;UBERON:0003057,6.64e-08,12;UBERON:0000010,2.77e-07,11 | |||
|phase1_expression=8.32774004944929,0,0.454999239389536,0,0,0.16787927191189,1.16806320297763,7.48915275961142,4.646027831005,2.80877431586392,0.856089841127525,0.478632953972018,3.42401459862411,2.88487327982691,0.333109761815663,0.202475267389826,0,1.89277299214943,1.50825876966313,2.97072756258621,15.3928355173436,2.38298282882125,1.56719873483361,0.319984845586813,0.45881856213434,0,0,0,0,0,0,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0.837063261473815,0.7813353445238,0.523523743973798,0,1.36609096991689,0.485510353031154,11.4566104357775,8.61703915365874,9.9115246167308,23.4717403304412,25.0728929837513,22.4079906389161,24.8870270815083,20.1580447140522,43.1257693094915,2.34895648480831,3.62681071005672,5.71359458542189,22.8960898071993,13.4670716771216,27.3306208907044,43.9026720065327,34.3844136526821,38.0298842103708,29.4794742900145,22.2323699027785,12.5985960419396,21.7550599764734,12.0781619540837,41.3448152515398,37.2691756161908,35.2544681848824,43.6069180811361,39.5410927340598,60.8436596780102,61.8431914664518,28.5403562170843,32.2999237331457,41.3648453974509,64.9683697896393,77.8892762319645,73.2703163632281,44.8413378282659,37.967372095,34.9011958273029,73.7043117363646,62.4666497135165,58.5217288985183,56.5686884109442,54.5283537460564,46.2270625646745,65.5788834265374,104.062038267044,12.1743085254705,1.72084775396277,0,0,0,0.896053774194671,5.61777680527007,12.6118438707763,9.87186817490901,12.3668851078619,13.239281459008,23.0987659345772,22.9324715735981,0,2.38140145112336,5.82727690592727,5.56076889516262,4.5673551887624,2.84831672011889,23.4538579722423,11.7970022200972,20.7036525252256,17.7573932887165,17.6345489446568,20.1076689202055,12.9436589069566,8.15743393523434,6.2177723475562,3.5384422077995,3.07357014900077,2.20841518460394,2.90925151881133,0,63.5334329515057,69.5363066620671,2.04365644166873,2.87556298814209,1.19980546198682,1.90605340609597,63.9606030258593,59.0175777636028,32.5444771972319,66.9223632740264,46.7959286914505,85.1930982694196,65.3832290163063,6.31404055871961,4.22983700074316,8.33985102831127,7.15502310014011,11.7108398666433,13.5642241615749,20.7071449276152,15.3718914192429,15.4442853073514,14.7330778327577,15.6481880014747,21.4723797713383,10.7783996466421,11.7245769704048,12.3165786914764,8.32943783224784,10.0097009721215,7.3132954969655,5.35033554660653,8.16040493955822,1.40442637462647,0.51469581422943,2.27330799516474,3.10688658803253,4.69052119962192,2.70093092191522,4.02466050494857,3.54175617145327,6.01641740260775,2.32533944750408,3.48755421819505,2.33530684734339,0.987359099480883,2.46251196118643,2.75633952455909,1.02339991197733,3.29325172936576,2.01309628140558,57.1988660094426,36.0166143327495,0.991256348951394,1.05780226665418,13.4371597837197,10.6828869055802,9.27845721519072,4.23535401709019,5.33707305227689,6.08722003560189,2.84717436926707,4.44687177754829,1.25667604400135,3.97912944082302,2.72949721966768,2.69645822596266,2.59365659849633,1.99141273254367,9.10405924574792,7.88314737007129,9.01661885384643,7.33144780243131,5.62462212786115,5.75113723100612,6.00747102680444,4.87113488332687,3.92496819603437,3.70191491765402,1.48226313543574,1.83529616287703,2.35870794135844,2.24862112384854,0.811440485554012,0.72353147925725,0.763877555344259,0.863088412352432,1.94562272130042,0.549122826376163,0,2.60498663367952,0.936113019343682,0.757736633841335,1.61457672169721,0.964887042726734,5.35784251483154,10.4220276473767,12.385338209594,8.48725428875941,10.0916806764056,8.37531287209079,9.52174563544055,6.24427673144956,8.35466263762812,5.3151525515706,8.92946704481928,5.24362607090362,4.83517949224508,5.64131328467895,15.0791283939272,25.0196614556606,1.47529281905711,1.37968373152366,85.5734644634931,69.3893184625843,15.7377547561608,9.08895337935743,35.3369205746207,30.4542220551378,52.3478856490701,60.9370434779008,68.1763942692126,71.0522092279969,45.3387985875882,60.7892184455529,52.1779866889411,29.8828824272281,11.4971469018698,8.369083372361,8.63300884573953,10.5580878702423,3.98235415019888,7.52619972080442,5.74414758233027,3.39489143560617,5.02013217897314,4.61152721915891,1.29214146584111,2.90826983582004,2.85197902707777,2.52829406348653,2.10837217149998,4.12542172992747,23.1498931912576,10.443543453816,12.8065096944927,8.57348140126369,12.5911565886014,11.5939731441346,12.5057255657612,8.82948352432338,6.8054795338476,15.0400770313312,4.41056796109924,8.40919890001548,6.94297034792394,5.06628569396509,5.01363844813173,5.25250879184196,1.1659233465194,71.5741665760567,2.73393409276564,5.57244543500701,3.33350149265481,1.50694765603753,0.683471138605126,3.43167259809784,1.5298058699447,2.51912614182584,2.76399947608848,0,12.811607740036,7.9294592179471,5.72428306355547,5.85447228840512,4.58561383866973,4.85511646985355,3.47144514046411,3.14107130380836,1.94422459937689,3.72803587852155,2.25477175473676,8.52244312450679,6.45288112782681,11.8615224889869,7.23295011475294,10.8131920314098,7.98029222791127,4.4269490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| ||
|short_description=p1@Kif3c | |short_description=p1@Kif3c | ||
}} | }} |
Latest revision as of 13:44, 26 September 2015
Short description: | p1@Kif3c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kif3c_5end |
Coexpression cluster: | MCL_coexpression_mm9:1605 |
Association with transcript: | 158bp_to_ENSMUST00000020999, ENSMUST00000168012, NM_008445, uc007mwm.1, uc007mwn.1_5end |
EntrezGene: | Kif3c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.48e-21 | 44 |
neurectodermal cell | 1.48e-21 | 44 |
neural cell | 1.96e-21 | 43 |
electrically responsive cell | 2.72e-17 | 39 |
electrically active cell | 2.72e-17 | 39 |
neuron | 5.25e-17 | 33 |
neuronal stem cell | 5.25e-17 | 33 |
neuroblast | 5.25e-17 | 33 |
electrically signaling cell | 5.25e-17 | 33 |
CNS neuron (sensu Vertebrata) | 1.41e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.41e-12 | 23 |
embryonic cell | 4.03e-09 | 70 |