Personal tools

FFCP PHASE1:Mm9::chr2:30823379..30823444,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr2:30823379..30823444,-
|DHSsupport=NA
|short_description=p1@Tor1a
|DPIdataset=NA
|description=CAGE_peak_1_at_Tor1a_5end
|association_with_transcript=0bp_to_ENSMUST00000137694,ENSMUST00000143199,NM_144884,uc008jdc.2_5end
|EntrezGene=30931
|EntrezGene=30931
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q3TV62,Q9ER39
|UniProt=Q3TV62,Q9ER39
|association_with_transcript=0bp_to_ENSMUST00000137694,ENSMUST00000143199,NM_144884,uc008jdc.2_5end
|cluster_id=chr2:30823379..30823444,-
|description=CAGE_peak_1_at_Tor1a_5end
|id=chr2:30823379..30823444,-
|ontology_enrichment_celltype=CL:0002371!5.20e-20!118;CL:0000144!7.56e-20!121;CL:0000012!7.56e-20!121;CL:0000548!3.90e-18!115;CL:0000004!3.90e-18!115;CL:0000255!3.90e-18!115;CL:0000723!9.40e-16!91;CL:0000048!9.40e-16!91;CL:0000034!2.95e-14!97;CL:0000063!4.63e-11!66;CL:0002321!4.76e-11!70;CL:0000220!4.76e-11!70;CL:0000219!8.66e-11!54;CL:0002320!9.62e-09!46;CL:0000134!9.62e-09!46;CL:0000055!1.22e-08!50;CL:0000221!1.68e-08!44;CL:0000133!1.68e-08!44;CL:0002319!2.74e-08!43;CL:0000117!9.08e-07!23;CL:0000337!9.08e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000723,9.40e-16,91;CL:0000048,9.40e-16,91;CL:0000034,2.95e-14,97;CL:0002321,4.76e-11,70;CL:0000219,8.66e-11,54;CL:0002320,9.62e-09,46;CL:0000134,9.62e-09,46;CL:0000221,1.68e-08,44;CL:0000133,1.68e-08,44;CL:0002319,2.74e-08,43;CL:0000117,9.08e-07,23;CL:0000337,9.08e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002384!9.62e-09!46
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.62e-09,46;UBERON:0011216,4.25e-07,194
|phase1_expression=15.534438169165,39.0852456556084,55.9649064449129,31.1538137646035,35.0627010962443,18.298840638396,16.8201101228778,19.2393751927949,15.3459707145317,10.7669682108117,15.0671812038444,17.1510141839973,15.4080656938085,13.8998439846206,17.9879271380458,13.3633676477285,16.0899231969474,18.1390745080987,16.8650753335059,17.3999757237192,12.5864069423583,19.4610264353735,19.3287843962812,22.2389467682835,36.0172571275457,37.8993096315913,35.3224836850441,25.8565479223067,26.2232318849796,28.2273745331122,28.8249663851896,36.196748387199,29.5231098040594,15.8481681015439,14.4425809875637,18.7845149255096,16.5377178572519,47.2940742732706,71.1015163516658,50.2582794214846,51.1761394586982,53.2775478267588,51.9496077743334,14.8558245211181,13.8886395770735,13.2153661556411,43.8139152834902,29.4333961113603,23.5064215525885,21.970578595394,17.358316281545,27.3129872293446,13.7581736967344,18.859415692295,14.452033363126,17.2363822144084,20.057340795713,20.6268836910977,26.5034563726073,25.3915670050576,31.0577387718028,26.0910289693232,24.9002542911119,60.2932810578537,60.3208481165854,68.9165711497717,42.2436155830951,46.1061966385865,23.6412316063329,22.4109857630606,25.0286704008145,25.1372866275347,29.8172530284678,23.3957426500562,23.7696768125226,33.0918763179608,19.82085857989,16.98241596533,15.5142598588806,24.3989632300859,24.6101761290482,26.5665818983948,22.6138229191119,12.9435400307286,20.4749652020926,21.2132581541041,19.362548588678,20.1311401491325,16.5840363399673,17.0036010240267,12.7540375028738,35.2773789562368,70.0370473718983,50.192396822317,35.7377029596218,61.8277104194323,17.8364413567325,10.7371103224176,13.5088722393492,21.9070536196411,20.281452447842,7.69958864485907,5.09610479413291,0,27.9273442904466,25.3359865475099,24.7706978057244,32.428221840213,10.3575153458869,13.6566767939639,17.5220180033797,10.0473607843007,11.992005857315,13.565037649736,11.8764594207062,16.0853236901985,16.5620628382031,7.95296463059514,23.8844849026466,11.8089800461609,13.6921741445444,10.6672555689749,11.1835056730873,9.9545470983926,15.4990563041957,19.4147361958529,25.1611761462433,35.9941638596045,27.7013095019281,10.1857634795279,14.640019290196,17.3403005915753,15.9918374576894,15.0872119824895,11.2205544062162,14.9261962022337,13.7483141197927,12.4406970610093,9.35074206204597,10.7325346502102,14.7036100547855,18.1622662502444,12.6043490863744,12.6592046982001,13.5392633311142,11.1458936647819,14.2426621330788,7.24369438069244,14.0119195406347,15.1284864134255,15.3077478022636,16.2204841996405,12.7901734643775,11.1440693287093,11.7295817752528,14.7285357445685,25.2796747432765,38.3448381600926,47.455304399064,12.8417978972011,11.0227248191115,14.0448407939592,9.46978942340841,10.8220327461072,14.6553757243009,11.1616293480196,9.12129564758705,11.2094728672483,8.06343264576054,9.19337798842933,7.29619285912702,8.62579925809461,10.7579556492615,8.99183005694491,15.3511662451813,16.4647379806855,42.2936042219261,39.4031344328681,11.0909890278322,12.7730169523241,11.2114691350221,11.6976444281539,14.2321948060717,18.8323369851434,32.2679761850268,26.0224348463937,19.3528110776208,23.0789507567735,19.3014446247929,22.4704852163555,22.6944952368429,25.2909417033046,22.3808123124636,14.2810640762161,13.5249282807697,11.6081256871829,10.861339281387,13.6063490587218,9.92813632850839,12.1040321343274,12.7168969551514,12.4631135561019,40.3175572838523,13.1807633515714,11.7935397067922,15.0657615297852,14.4030686185837,18.0882869814313,13.4951701444152,17.5494643844994,47.9920271254105,37.3403521935791,23.0029130443767,30.1434167611488,32.4519180039143,34.6033062787543,25.8332275471554,43.419916922703,10.9004382198297,15.9172785887207,10.1038285394056,12.7308814331391,15.4895563870411,11.7254380209271,14.5206620940468,14.2447562936193,8.6699329258405,10.85176979279,14.5103839478313,16.2224681568581,10.5337838938196,14.1756077409881,30.1582567878545,56.5661911171458,15.2446924635901,9.93372286697037,11.0779907091576,10.4318401067061,11.4754461763673,6.5642441073137,22.085575359138,14.055794794679,14.0025208526319,10.0366895140072,16.0415045339324,16.7015153165411,21.4549671887694,11.6902343164525,14.6256477840214,7.71171159412337,12.3487874131194,20.6556100254016,14.6598263418218,10.5580878702423,18.5843193675948,14.0812768969889,14.511530734308,12.0707251043775,14.1744908582771,9.22305443831782,20.6742634534577,15.6319503675327,9.9819265947722,12.6414703174326,18.9753495434998,18.5643977846736,20.0859367394735,14.2248264284735,16.8166288917581,12.4315480318324,15.9606210278046,20.5124140242381,18.4294903074375,21.9214763362511,9.1521966144847,16.7347335982418,17.201215048287,9.23363016472288,7.42736362801165,10.1325713879302,10.7435109602823,9.19189038572343,25.9417944600567,9.82754100655701,17.2579589605831,13.6215332855727,15.0007567169466,11.6788443342908,14.7629765938707,13.4979122191848,13.2583175395207,15.2547083032787,16.4457968827264,12.4107180341965,12.9697757368265,11.5892096262304,12.7446302169725,13.381650944926,11.5732158785474,13.2167059457124,11.571483801547,12.0407733312654,19.4422459937689,15.5334828271731,2.25477175473676,15.4002042425298,13.2366792365678,16.5283510092441,16.4032975816719,13.685446164753,12.9092962510329,14.0620735631466,11.953965264531,8.69702834973622,5.47257011889944,11.3764003426144,13.582589424441,10.681939545142,11.8227948909793,10.7416017400489,10.9274745129696,11.658958603437,13.7351260272357,12.0150075438296,14.860327297725,14.9222754002524,12.3771508539486,14.9128354542511,12.3889516312463,8.38902419376282,11.7652555288254,10.3170935100897,13.4307693091263,8.88672132548076,13.8885031833875,10.2564909589668,8.36036678408357,17.5550236412377,10.7302850097243,15.1907328047368,18.3326564300607,27.8402155396774,18.4972280338073,18.1294535373528,20.2506750069542,18.0128481289688,14.9536994964788,12.9440077937955,7.78405106881325,13.5668456956351,12.2928196142977,13.8570828728928,8.38452650511929,7.90527086335061,11.1123363900808,11.5379632053781,7.06022261101994,10.8659801058433,10.6461305953901,12.449338531481,14.4207921503619,11.4605022804716,11.0276100394777,14.2888107384922,12.9790445058238,13.5036454324594,13.5988347265091,11.9231125308862,7.88599280486455,11.1809757880383,10.7296285476294,10.4649419975277,10.4461412261017,10.4075967706762,11.5244622909847,8.41823076601097,9.50628796921032,4.48913817326191,11.0330566855482,13.1996006383255,10.6400071224119,12.3949472948773,12.346023102793,15.7380664100906,12.8662384644975,15.2558448374292,9.37312827137333,11.2501623750953,12.2889952878823
|phase1_expression=15.534438169165,39.0852456556084,55.9649064449129,31.1538137646035,35.0627010962443,18.298840638396,16.8201101228778,19.2393751927949,15.3459707145317,10.7669682108117,15.0671812038444,17.1510141839973,15.4080656938085,13.8998439846206,17.9879271380458,13.3633676477285,16.0899231969474,18.1390745080987,16.8650753335059,17.3999757237192,12.5864069423583,19.4610264353735,19.3287843962812,22.2389467682835,36.0172571275457,37.8993096315913,35.3224836850441,25.8565479223067,26.2232318849796,28.2273745331122,28.8249663851896,36.196748387199,29.5231098040594,15.8481681015439,14.4425809875637,18.7845149255096,16.5377178572519,47.2940742732706,71.1015163516658,50.2582794214846,51.1761394586982,53.2775478267588,51.9496077743334,14.8558245211181,13.8886395770735,13.2153661556411,43.8139152834902,29.4333961113603,23.5064215525885,21.970578595394,17.358316281545,27.3129872293446,13.7581736967344,18.859415692295,14.452033363126,17.2363822144084,20.057340795713,20.6268836910977,26.5034563726073,25.3915670050576,31.0577387718028,26.0910289693232,24.9002542911119,60.2932810578537,60.3208481165854,68.9165711497717,42.2436155830951,46.1061966385865,23.6412316063329,22.4109857630606,25.0286704008145,25.1372866275347,29.8172530284678,23.3957426500562,23.7696768125226,33.0918763179608,19.82085857989,16.98241596533,15.5142598588806,24.3989632300859,24.6101761290482,26.5665818983948,22.6138229191119,12.9435400307286,20.4749652020926,21.2132581541041,19.362548588678,20.1311401491325,16.5840363399673,17.0036010240267,12.7540375028738,35.2773789562368,70.0370473718983,50.192396822317,35.7377029596218,61.8277104194323,17.8364413567325,10.7371103224176,13.5088722393492,21.9070536196411,20.281452447842,7.69958864485907,5.09610479413291,0,27.9273442904466,25.3359865475099,24.7706978057244,32.428221840213,10.3575153458869,13.6566767939639,17.5220180033797,10.0473607843007,11.992005857315,13.565037649736,11.8764594207062,16.0853236901985,16.5620628382031,7.95296463059514,23.8844849026466,11.8089800461609,13.6921741445444,10.6672555689749,11.1835056730873,9.9545470983926,15.4990563041957,19.4147361958529,25.1611761462433,35.9941638596045,27.7013095019281,10.1857634795279,14.640019290196,17.3403005915753,15.9918374576894,15.0872119824895,11.2205544062162,14.9261962022337,13.7483141197927,12.4406970610093,9.35074206204597,10.7325346502102,14.7036100547855,18.1622662502444,12.6043490863744,12.6592046982001,13.5392633311142,11.1458936647819,14.2426621330788,7.24369438069244,14.0119195406347,15.1284864134255,15.3077478022636,16.2204841996405,12.7901734643775,11.1440693287093,11.7295817752528,14.7285357445685,25.2796747432765,38.3448381600926,47.455304399064,12.8417978972011,11.0227248191115,14.0448407939592,9.46978942340841,10.8220327461072,14.6553757243009,11.1616293480196,9.12129564758705,11.2094728672483,8.06343264576054,9.19337798842933,7.29619285912702,8.62579925809461,10.7579556492615,8.99183005694491,15.3511662451813,16.4647379806855,42.2936042219261,39.4031344328681,11.0909890278322,12.7730169523241,11.2114691350221,11.6976444281539,14.2321948060717,18.8323369851434,32.2679761850268,26.0224348463937,19.3528110776208,23.0789507567735,19.3014446247929,22.4704852163555,22.6944952368429,25.2909417033046,22.3808123124636,14.2810640762161,13.5249282807697,11.6081256871829,10.861339281387,13.6063490587218,9.92813632850839,12.1040321343274,12.7168969551514,12.4631135561019,40.3175572838523,13.1807633515714,11.7935397067922,15.0657615297852,14.4030686185837,18.0882869814313,13.4951701444152,17.5494643844994,47.9920271254105,37.3403521935791,23.0029130443767,30.1434167611488,32.4519180039143,34.6033062787543,25.8332275471554,43.419916922703,10.9004382198297,15.9172785887207,10.1038285394056,12.7308814331391,15.4895563870411,11.7254380209271,14.5206620940468,14.2447562936193,8.6699329258405,10.85176979279,14.5103839478313,16.2224681568581,10.5337838938196,14.1756077409881,30.1582567878545,56.5661911171458,15.2446924635901,9.93372286697037,11.0779907091576,10.4318401067061,11.4754461763673,6.5642441073137,22.085575359138,14.055794794679,14.0025208526319,10.0366895140072,16.0415045339324,16.7015153165411,21.4549671887694,11.6902343164525,14.6256477840214,7.71171159412337,12.3487874131194,20.6556100254016,14.6598263418218,10.5580878702423,18.5843193675948,14.0812768969889,14.511530734308,12.0707251043775,14.1744908582771,9.22305443831782,20.6742634534577,15.6319503675327,9.9819265947722,12.6414703174326,18.9753495434998,18.5643977846736,20.0859367394735,14.2248264284735,16.8166288917581,12.4315480318324,15.9606210278046,20.5124140242381,18.4294903074375,21.9214763362511,9.1521966144847,16.7347335982418,17.201215048287,9.23363016472288,7.42736362801165,10.1325713879302,10.7435109602823,9.19189038572343,25.9417944600567,9.82754100655701,17.2579589605831,13.6215332855727,15.0007567169466,11.6788443342908,14.7629765938707,13.4979122191848,13.2583175395207,15.2547083032787,16.4457968827264,12.4107180341965,12.9697757368265,11.5892096262304,12.7446302169725,13.381650944926,11.5732158785474,13.2167059457124,11.571483801547,12.0407733312654,19.4422459937689,15.5334828271731,2.25477175473676,15.4002042425298,13.2366792365678,16.5283510092441,16.4032975816719,13.685446164753,12.9092962510329,14.0620735631466,11.953965264531,8.69702834973622,5.47257011889944,11.3764003426144,13.582589424441,10.681939545142,11.8227948909793,10.7416017400489,10.9274745129696,11.658958603437,13.7351260272357,12.0150075438296,14.860327297725,14.9222754002524,12.3771508539486,14.9128354542511,12.3889516312463,8.38902419376282,11.7652555288254,10.3170935100897,13.4307693091263,8.88672132548076,13.8885031833875,10.2564909589668,8.36036678408357,17.5550236412377,10.7302850097243,15.1907328047368,18.3326564300607,27.8402155396774,18.4972280338073,18.1294535373528,20.2506750069542,18.0128481289688,14.9536994964788,12.9440077937955,7.78405106881325,13.5668456956351,12.2928196142977,13.8570828728928,8.38452650511929,7.90527086335061,11.1123363900808,11.5379632053781,7.06022261101994,10.8659801058433,10.6461305953901,12.449338531481,14.4207921503619,11.4605022804716,11.0276100394777,14.2888107384922,12.9790445058238,13.5036454324594,13.5988347265091,11.9231125308862,7.88599280486455,11.1809757880383,10.7296285476294,10.4649419975277,10.4461412261017,10.4075967706762,11.5244622909847,8.41823076601097,9.50628796921032,4.48913817326191,11.0330566855482,13.1996006383255,10.6400071224119,12.3949472948773,12.346023102793,15.7380664100906,12.8662384644975,15.2558448374292,9.37312827137333,11.2501623750953,12.2889952878823
|short_description=p1@Tor1a
}}
}}

Latest revision as of 13:26, 26 September 2015

Short description:p1@Tor1a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tor1a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000137694, ENSMUST00000143199, NM_144884, uc008jdc.2_5end
EntrezGene:Tor1a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tor1a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.53
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I539.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I655.96
CD326+ enterocyte, pool1.CNhs13542.11848-124I331.15
CD326+ enterocyte, pool2.CNhs13197.11849-124I435.06
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I718.30
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I816.82
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E715.35
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F210.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E615.07
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F117.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E415.41
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.90
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A117.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.36
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A516.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A218.14
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A416.87
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A617.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H219.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I919.33
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D122.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D236.02
GP2+ M cell, pool1.CNhs13228.11845-124H937.90
GP2+ M cell, pool2.CNhs13231.11846-124I135.32
GP2+ M cell, pool3.CNhs13240.11847-124I225.86
Ileum epithelium, pool1.CNhs13199.10252-104B926.22
Ileum epithelium, pool2.CNhs13232.10253-104C128.23
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C828.82
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I336.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G629.52
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F514.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F618.78
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F716.54
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G847.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H171.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H350.26
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G951.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H253.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H451.95
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D814.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D913.89
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B743.81
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C229.43
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B823.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C417.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C427.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.76
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I918.86
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A114.45
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C117.24
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E120.06
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C520.63
Mouse Granule cells, donor1.CNhs12131.11713-123C326.50
Mouse Granule cells, donor2.CNhs12357.11731-123E325.39
Mouse Granule cells, donor3.CNhs12108.11636-122C731.06
Mouse Meningeal cells, donor1.CNhs12132.11716-123C626.09
Mouse Meningeal cells, donor3.CNhs12109.11639-122D124.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C760.29
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E760.32
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D268.92
Mouse Microglia, donor1.CNhs12629.11718-123C842.24
Mouse Microglia, donor2.CNhs12634.11736-123E846.11
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D523.64
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F522.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D925.03
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F125.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D529.82
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D223.40
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F223.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D633.09
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.51
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D424.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F424.61
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D826.57
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.61
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.47
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D621.21
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.36
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E120.13
Mouse Schwann, donor1.CNhs12507.11728-123D916.58
Mouse Schwann, donor2.CNhs12573.11746-123F917.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.75
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F735.28
Mouse hepatocyte, donor1.CNhs13078.11714-123C470.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C850.19
Mouse hepatocyte, donor6.CNhs13090.11822-124F435.74
Mouse hepatocyte, donor8.CNhs13091.11824-124F661.83
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A717.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E313.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I821.91
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G620.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G127.93
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G225.34
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G324.77
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B632.43
accessory axillary lymph node, adult.CNhs10475.1063-29H910.36
adrenal gland, adult.CNhs10508.49-24D713.66
adrenal gland, embryo E14.CNhs11038.406-44C517.52
adrenal gland, embryo E16.CNhs11004.1254-43D610.05
adrenal gland, embryo E17.CNhs11043.1263-45I111.99
adrenal gland, embryo E18.CNhs11026.1262-18F513.57
adrenal gland, neonate N00.CNhs11191.1311-23C111.88
adrenal gland, neonate N25.CNhs11223.1377-27I316.09
amnion, adult pregnant day17.5.CNhs10488.583-22A816.56
aorta, adult.CNhs10498.46-23H17.95
bone (os femoris), adult.CNhs10483.56-12G223.88
bone (os femoris), neonate N02.CNhs11227.1985-43F511.81
bone (os femoris), neonate N16.CNhs11225.1525-43A613.69
bone (os femoris), neonate N20.CNhs11195.1350-25C310.67
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B29.95
cerebellum, neonate N30.CNhs11135.1395-42I215.50
colon, adult.CNhs10468.36-18H719.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C725.16
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D135.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D427.70
corpora quadrigemina, adult.CNhs10501.16-22A410.19
corpus striatum, adult.CNhs10487.19-21D814.64
corpus striatum, neonate N00.CNhs11226.630-43F117.34
cortex, adult.CNhs10473.12-14D515.99
cortex, neonate N30.CNhs11107.1392-42F215.09
diencephalon, adult.CNhs10482.20-12F211.22
diencephalon, neonate N30.CNhs11201.1388-42B214.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.44
epididymis, adult.CNhs10490.58-23B29.35
eyeball, adult.CNhs10484.31-12G410.73
eyeball, embryo E12.CNhs11016.345-16C614.70
eyeball, embryo E14.CNhs10521.399-16E218.16
eyeball, embryo E15.CNhs10593.426-16C912.60
eyeball, embryo E17.CNhs11023.1261-18D412.66
eyeball, neonate N00.CNhs11207.633-15C613.54
eyeball, neonate N01.CNhs11140.1532-43E711.15
eyeball, neonate N02.CNhs11205.1551-44G814.24
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E214.01
forelimb, embryo E12.CNhs10600.359-14H215.13
forelimb, embryo E13.CNhs10589.384-1E215.31
forelimb, embryo E14.CNhs10577.413-26A816.22
forelimb, embryo E15.CNhs11007.437-20E712.79
forelimb, embryo E17.CNhs10598.1517-43C411.14
forelimb, embryo E18.CNhs11008.1520-43B511.73
gonad, embryo E13.CNhs11044.1564-45I614.73
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C825.28
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D238.34
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D547.46
heart, embryo E11.CNhs10586.331-24E912.84
heart, embryo E12.CNhs11015.353-12F511.02
heart, embryo E13.CNhs11013.376-3I914.04
heart, embryo E14.CNhs10597.403-26D49.47
heart, embryo E15.CNhs11017.431-16C810.82
heart, embryo E16.CNhs11021.457-17C614.66
heart, embryo E17.CNhs11025.479-18E511.16
heart, embryo E18.CNhs11030.1283-20G39.12
heart, neonate N00.CNhs11213.639-21E311.21
heart, neonate N03.CNhs11221.1349-25I28.06
heart, neonate N10.CNhs11118.749-24G19.19
heart, neonate N16.CNhs11209.782-15G17.30
heart, neonate N20.CNhs11127.821-26I68.63
heart, neonate N25.CNhs11196.1351-25D310.76
heart, neonate N30.CNhs11202.1390-42D28.99
hippocampus, adult.CNhs10478.13-16E815.35
hippocampus, neonate N00.CNhs11228.627-43G116.46
intestinal mucosa, adult.CNhs10506.860-29I342.29
intestine, adult.CNhs10496.178-9A339.40
intestine, embryo E12.CNhs11019.1251-16I511.09
intestine, embryo E13.CNhs11010.381-16D512.77
intestine, embryo E15.CNhs10602.976-16D811.21
intestine, embryo E16.CNhs10585.463-22H411.70
intestine, embryo E17.CNhs10582.482-18D314.23
intestine, embryo E18.CNhs10526.1289-20F718.83
intestine, neonate N00.CNhs11126.644-26D132.27
intestine, neonate N01.CNhs11192.1322-23E926.02
intestine, neonate N06.CNhs11102.688-20B819.35
intestine, neonate N07.CNhs11095.720-20F223.08
intestine, neonate N10.CNhs11098.755-23A519.30
intestine, neonate N20.CNhs11187.827-18D122.47
intestine, neonate N25.CNhs11121.1352-25E322.69
intestine, neonate N30.CNhs11131.1384-42G125.29
kidney, embryo E14.CNhs10606.411-4I922.38
kidney, embryo E15.CNhs10997.434-16F814.28
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I211.61
kidney, embryo E18.CNhs11001.1288-20C710.86
kidney, neonate N00.CNhs11214.646-21G713.61
kidney, neonate N10.CNhs11206.758-6D59.93
kidney, neonate N20.CNhs11113.832-19I112.10
kidney, neonate N25.CNhs11122.1353-25F312.72
kidney, neonate N30.CNhs11203.1385-42H112.46
liver, adult pregnant day01.CNhs10466.508-5B240.32
liver, embryo E12.CNhs10601.355-15F813.18
liver, embryo E13.CNhs10524.378-3H611.79
liver, embryo E14.CNhs10594.409-16E115.07
liver, embryo E15.CNhs10520.433-16D714.40
liver, embryo E16.CNhs10523.462-17F518.09
liver, embryo E17.CNhs10510.481-18A313.50
liver, embryo E18.CNhs10579.499-43G417.55
liver, neonate N00.CNhs11117.641-24F447.99
liver, neonate N03.CNhs11123.1345-25G237.34
liver, neonate N06.CNhs11101.684-20A823.00
liver, neonate N07.CNhs11103.716-20H230.14
liver, neonate N10.CNhs11115.751-24B932.45
liver, neonate N20.CNhs11220.823-25A334.60
liver, neonate N25.CNhs11198.1368-26H125.83
liver, neonate N30.CNhs11106.1382-42D143.42
lung, adult.CNhs10474.28-22B110.90
lung, embryo E12.CNhs10522.354-16G215.92
lung, embryo E14.CNhs10604.404-26F810.10
lung, embryo E15.CNhs11020.432-17C512.73
lung, embryo E16.CNhs10998.458-17B615.49
lung, embryo E17.CNhs10605.480-44A611.73
lung, embryo E18.CNhs10583.1287-20I614.52
lung, neonate N00.CNhs11224.640-42C614.24
lung, neonate N06.CNhs11212.683-20E58.67
lung, neonate N07.CNhs11111.715-19A310.85
lung, neonate N10.CNhs11219.750-23E614.51
lung, neonate N20.CNhs11109.822-18A416.22
lung, neonate N25.CNhs11119.1359-25C710.53
lung, neonate N30.CNhs11133.1394-42H214.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A130.16
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A156.57
mammary gland, adult lactating day02.CNhs10480.595-22B615.24
mammary gland, adult pregnant day19.CNhs10476.588-5H29.93
medulla oblongata, adult.CNhs10477.17-12C211.08
medulla oblongata, neonate N30.CNhs11200.1396-42A310.43
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C711.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.56
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E122.09
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.06
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.04
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.04
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D916.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.69
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D614.63
olfactory brain, adult.CNhs10489.18-22I97.71
ovary, adult.CNhs10507.91-2I712.35
ovary, embryo E18.CNhs11040.505-44H720.66
ovary, neonate N00.CNhs11217.1299-22I414.66
oviduct, adult pregnant day01.CNhs10500.988-6G610.56
pancreas, adult.CNhs10486.34-16E418.58
pancreas, embryo E14.CNhs11012.405-44F414.08
pancreas, embryo E15.CNhs11042.1556-45F214.51
pancreas, embryo E16.CNhs11003.460-26E512.07
pancreas, embryo E17.CNhs10599.1558-45G314.17
pancreas, embryo E18.CNhs10580.1535-43I79.22
pancreas, neonate N00.CNhs11105.645-26G920.67
pancreas, neonate N01.CNhs11138.1531-43D715.63
pancreas, neonate N02.CNhs11139.1539-43D89.98
pancreas, neonate N16.CNhs11136.787-43B612.64
pancreas, neonate N25.CNhs11094.1555-45E218.98
pancreas, neonate N30.CNhs11182.1548-44H518.56
pituitary gland, adult.CNhs10493.21-1G820.09
pituitary gland, embryo E12.CNhs11018.346-16E614.22
pituitary gland, embryo E13.CNhs11009.370-44C716.82
pituitary gland, embryo E14.CNhs11037.398-44A512.43
pituitary gland, embryo E15.CNhs10592.427-16B915.96
pituitary gland, embryo E16.CNhs11036.449-43F620.51
pituitary gland, embryo E17.CNhs11039.1265-44F518.43
pituitary gland, neonate N00.CNhs11190.1308-22E921.92
placenta, adult pregnant day10.CNhs10472.539-13I79.15
placenta, adult pregnant day17.CNhs10464.577-18G316.73
prostate, adult.CNhs10470.859-1F817.20
skin, adult.CNhs10492.30-1C39.23
skin, neonate N00.CNhs11124.650-25G47.43
skin, neonate N03.CNhs11215.662-22H310.13
skin, neonate N06.CNhs11097.693-20I510.74
skin, neonate N10.CNhs11108.762-6C49.19
small intestine, neonate N16.CNhs11114.790-21I125.94
spinal cord, adult.CNhs10505.24-13C99.83
spleen, adult.CNhs10465.25-2G217.26
spleen, embryo E16.CNhs11035.461-43C113.62
spleen, embryo E18.CNhs11011.1271-21F215.00
spleen, neonate N10.CNhs11116.752-24D111.68
spleen, neonate N20.CNhs11112.824-19H114.76
spleen, neonate N25.CNhs11099.1354-25G313.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C915.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D316.45
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E312.97
stomach, embryo E15.CNhs10603.1252-16G811.59
stomach, embryo E16.CNhs11022.459-17D412.74
stomach, embryo E17.CNhs11006.1035-18D513.38
stomach, embryo E18.CNhs10999.1286-20C611.57
stomach, neonate N03.CNhs11193.1340-24B813.22
stomach, neonate N07.CNhs11210.718-18A911.57
stomach, neonate N25.CNhs11104.1355-25E412.04
stomach, neonate N30.CNhs11134.1386-42I119.44
submandibular gland, adult.CNhs10469.59-29C115.53
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F515.40
testis, embryo E15.CNhs11034.443-27C513.24
testis, embryo E16.CNhs11033.470-26G516.53
testis, embryo E17.CNhs11029.486-18I516.40
testis, embryo E18.CNhs11027.503-18G513.69
testis, neonate N00.CNhs11189.1300-22B712.91
testis, neonate N07.CNhs11222.726-26I414.06
testis, neonate N10.CNhs11204.763-44D911.95
testis, neonate N20.CNhs11110.839-18H38.70
testis, neonate N30.CNhs11130.1391-42E25.47
thymus, adult.CNhs10471.38-12B511.38
thymus, embryo E14.CNhs11041.402-44I413.58
thymus, embryo E15.CNhs11005.430-45I210.68
thymus, embryo E16.CNhs11002.456-26C511.82
thymus, embryo E17.CNhs10581.478-18C110.74
thymus, embryo E18.CNhs10595.1273-19G410.93
thymus, neonate N02.CNhs11181.1541-43F811.66
thymus, neonate N03.CNhs11137.2104-43C713.74
thymus, neonate N06.CNhs11197.681-26C412.02
thymus, neonate N07.CNhs11211.713-19D314.86
thymus, neonate N10.CNhs11194.748-24E414.92
thymus, neonate N20.CNhs11186.820-7A212.38
thymus, neonate N25.CNhs11125.1362-25G714.91
thymus, neonate N30.CNhs11132.1393-42G212.39
tongue, adult.CNhs10499.32-1B48.39
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F710.32
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G513.43
urinary bladder, adult.CNhs10481.879-12E48.89
uterus, adult pregnant day19.CNhs10497.590-15F513.89
uterus, adult.CNhs10509.92-27E510.26
vagina, adult.CNhs10502.89-27D58.36
vesicular gland, adult.CNhs10491.51-27F817.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D727.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A418.50
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.13
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.95
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I87.78
whole body, embryo E12.CNhs10587.857-27C913.57
whole body, embryo E13.CNhs10512.372-23H212.29
whole body, embryo E14.5.CNhs10578.420-27D213.86
whole body, embryo E14.CNhs10519.395-14B18.38
whole body, embryo E16.CNhs10514.453-14F27.91
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.87
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.65
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.42
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.46
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.98
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.73
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.46
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.41
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.52
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.51
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.39
whole body, embryo E17.5.CNhs10513.490-9F912.35
whole body, embryo E17.CNhs10517.475-3I515.74
whole body, embryo E18.CNhs10516.493-3B312.87
whole body, neonate N00.CNhs10525.657-19C215.26
whole body, neonate N01.CNhs10576.659-23C69.37
whole body, neonate N06.CNhs10515.692-21D111.25
whole body, neonate N10.CNhs10518.761-6B412.29





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
somatic stem cell9.40e-1691
multi fate stem cell9.40e-1691
stem cell2.95e-1497
embryonic cell4.76e-1170
motile cell8.66e-1154
connective tissue cell9.62e-0946
mesenchymal cell9.62e-0946
ectodermal cell1.68e-0844
neurectodermal cell1.68e-0844
neural cell2.74e-0843
CNS neuron (sensu Vertebrata)9.08e-0723
neuroblast (sensu Vertebrata)9.08e-0723

Uber anatomy
Ontology termp-valuen
connective tissue9.62e-0946
organ system subdivision4.25e-07194
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:30823379..30823444,-&oldid=4255667"