FFCP PHASE1:Mm9::chr2:30329732..30329742,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72500 | |EntrezGene=72500 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1299 | |||
|TSSclassifier=NA | |||
|UniProt=Q99J55 | |UniProt=Q99J55 | ||
|association_with_transcript=-13bp_to_ENSMUST00000065134,NM_030244,uc008jco.1_5end | |association_with_transcript=-13bp_to_ENSMUST00000065134,NM_030244,uc008jco.1_5end | ||
|cluster_id=chr2:30329732..30329742,- | |||
|description=CAGE_peak_1_at_Ier5l_5end | |description=CAGE_peak_1_at_Ier5l_5end | ||
|id=chr2:30329732..30329742,- | |id=chr2:30329732..30329742,- | ||
|ontology_enrichment_celltype=CL:0000055!3.84e-14!50;CL:0002319!2.42e-11!43;CL:0000221!4.21e-11!44;CL:0000133!4.21e-11!44;CL:0002321!1.29e-10!70;CL:0000220!1.29e-10!70;CL:0000393!5.63e-09!39;CL:0000211!5.63e-09!39;CL:0000333!8.09e-08!10;CL:0000095!8.09e-08!10;CL:0000243!8.09e-08!10;CL:0000123!8.09e-08!10;CL:0000125!8.09e-08!10;CL:0000030!8.09e-08!10;CL:0000339!8.09e-08!10;CL:0002453!8.62e-07!8 | |ontology_enrichment_celltype=CL:0000055!3.84e-14!50;CL:0002319!2.42e-11!43;CL:0000221!4.21e-11!44;CL:0000133!4.21e-11!44;CL:0002321!1.29e-10!70;CL:0000220!1.29e-10!70;CL:0000393!5.63e-09!39;CL:0000211!5.63e-09!39;CL:0000333!8.09e-08!10;CL:0000095!8.09e-08!10;CL:0000243!8.09e-08!10;CL:0000123!8.09e-08!10;CL:0000125!8.09e-08!10;CL:0000030!8.09e-08!10;CL:0000339!8.09e-08!10;CL:0002453!8.62e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.41e-11,43;CL:0000221,4.20e-11,44;CL:0000133,4.20e-11,44;CL:0002321,1.29e-10,70;CL:0000393,5.61e-09,39;CL:0000211,5.61e-09,39;CL:0000333,8.08e-08,10;CL:0000095,8.08e-08,10;CL:0000243,8.08e-08,10;CL:0000123,8.08e-08,10;CL:0000125,8.08e-08,10;CL:0000030,8.08e-08,10;CL:0000339,8.08e-08,10;CL:0002453,8.60e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.61e-11!75;UBERON:0001016!1.61e-11!75;UBERON:0001017!1.30e-10!73;UBERON:0005743!1.30e-10!73;UBERON:0004121!8.96e-10!102;UBERON:0000924!8.96e-10!102;UBERON:0006601!8.96e-10!102;UBERON:0003056!3.95e-07!49;UBERON:0002780!6.07e-07!39;UBERON:0001890!6.07e-07!39;UBERON:0006240!6.07e-07!39;UBERON:0003080!7.34e-07!40;UBERON:0002791!9.37e-07!29;UBERON:0003528!9.37e-07!29;UBERON:0001893!9.37e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.61e-11,75;UBERON:0001017,1.30e-10,73;UBERON:0004121,1.48e-10,95;UBERON:0000924,1.48e-10,95;UBERON:0006601,1.48e-10,95;UBERON:0003056,3.94e-07,49;UBERON:0002780,6.06e-07,39;UBERON:0001890,6.06e-07,39;UBERON:0006240,6.06e-07,39;UBERON:0003080,7.33e-07,40;UBERON:0003528,9.35e-07,29;UBERON:0002791,9.35e-07,29;UBERON:0001893,9.35e-07,29 | |||
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| ||
|short_description=p1@Ier5l | |short_description=p1@Ier5l | ||
}} | }} |
Latest revision as of 13:10, 26 September 2015
Short description: | p1@Ier5l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ier5l_5end |
Coexpression cluster: | MCL_coexpression_mm9:1299 |
Association with transcript: | -13bp_to_ENSMUST00000065134, NM_030244, uc008jco.1_5end |
EntrezGene: | Ier5l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.41e-11 | 43 |
ectodermal cell | 4.20e-11 | 44 |
neurectodermal cell | 4.20e-11 | 44 |
embryonic cell | 1.29e-10 | 70 |
electrically responsive cell | 5.61e-09 | 39 |
electrically active cell | 5.61e-09 | 39 |
migratory neural crest cell | 8.08e-08 | 10 |
neuron associated cell | 8.08e-08 | 10 |
glial cell (sensu Vertebrata) | 8.08e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 8.08e-08 | 10 |
glial cell | 8.08e-08 | 10 |
glioblast | 8.08e-08 | 10 |
glioblast (sensu Vertebrata) | 8.08e-08 | 10 |
oligodendrocyte precursor cell | 8.60e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.61e-11 | 75 |
central nervous system | 1.30e-10 | 73 |
ectoderm-derived structure | 1.48e-10 | 95 |
ectoderm | 1.48e-10 | 95 |
presumptive ectoderm | 1.48e-10 | 95 |
pre-chordal neural plate | 3.94e-07 | 49 |
regional part of forebrain | 6.06e-07 | 39 |
forebrain | 6.06e-07 | 39 |
future forebrain | 6.06e-07 | 39 |
anterior neural tube | 7.33e-07 | 40 |
brain grey matter | 9.35e-07 | 29 |
regional part of telencephalon | 9.35e-07 | 29 |
telencephalon | 9.35e-07 | 29 |