FFCP PHASE1:Mm9::chr2:30061219..30061236,-: Difference between revisions
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{{FFCP|EntrezGene=70266|HGNC=|MCL_coexpression_id=10|UniProt=Q05CI8,Q8BTY1|association_with_transcript=0bp_to_NM_172404,uc008jbo.1,uc008jbr.1,uc008jbs.1_5end|description=CAGE_peak_5_at_Ccbl1_5end|id=chr2:30061219..30061236,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003103!2.68e-09!43;UBERON:0002346!2.84e-09!71;UBERON:0003075!2.84e-09!71;UBERON:0007284!2.84e-09!71;UBERON:0000025!2.93e-09!114;UBERON:0004111!3.16e-09!122;UBERON:0000033!3.76e-09!63;UBERON:0001049!6.09e-09!52;UBERON:0005068!6.09e-09!52;UBERON:0006241!6.09e-09!52;UBERON:0007135!6.09e-09!52;UBERON:0001017!8.53e-09!73;UBERON:0005743!8.53e-09!73;UBERON:0000955!1.65e-08!50;UBERON:0006238!1.65e-08!50;UBERON:0004121!1.93e-08!102;UBERON:0000924!1.93e-08!102;UBERON:0006601!1.93e-08!102;UBERON:0000073!4.45e-08!75;UBERON:0001016!4.45e-08!75;UBERON:0002616!4.59e-08!49;UBERON:0007100!1.92e-07!18;UBERON:0000948!1.92e-07!18;UBERON:0005498!1.92e-07!18;UBERON:0004140!1.92e-07!18;UBERON:0009881!1.92e-07!18;UBERON:0004141!1.92e-07!18;UBERON:0003084!1.92e-07!18;UBERON:0007005!1.92e-07!18;UBERON:0004139!1.92e-07!18;UBERON:0004291!1.92e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.81e-15,92;UBERON:0003103,1.08e-12,43;UBERON:0007100,1.14e-11,18;UBERON:0000948,1.14e-11,18;UBERON:0005498,1.14e-11,18;UBERON:0004140,1.14e-11,18;UBERON:0009881,1.14e-11,18;UBERON:0004141,1.14e-11,18;UBERON:0003084,1.14e-11,18;UBERON:0007005,1.14e-11,18;UBERON:0004139,1.14e-11,18;UBERON:0004291,1.14e-11,18;UBERON:0004535,8.99e-10,23;UBERON:0001009,8.99e-10,23;UBERON:0001017,9.36e-09,73;UBERON:0000073,2.27e-08,54;UBERON:0001016,2.62e-08,75;UBERON:0000025,2.89e-07,114;UBERON:0004111,3.10e-07,122;UBERON:0001049,3.31e-07,52;UBERON:0005068,3.31e-07,52;UBERON:0006241,3.31e-07,52;UBERON:0007135,3.31e-07,52;UBERON:0002346,7.84e-07,64;UBERON:0003075,7.84e-07,64;UBERON:0007284,7.84e-07,64|phase1_expression=0.480446541314382,0.697950815278722,0,0,0,0.16787927191189,0.467225281191051,0.129123323441576,0,0,0.171217968225505,0,0,0.174840804837995,0.333109761815663,0.404950534779652,0,0,0.274228867211478,0,0.595303031057488,0.595745707205312,0.522399578277871,0.639969691173627,0.45881856213434,1.14846392823004,0,0.861884930743556,0.570070258369122,1.00812051903972,0,1.27006134691926,0,0,0.288851619751275,0.997407872150954,0.612508068787107,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,1.56478268869608,0.872100625521786,1.75748946187577,0.388859798148567,0.279972843250725,0,0.167782606057736,0,0,0.514518872071894,0.286533439938757,0.515672092277442,0.809265843438391,1.5869729378161,0.633831403506179,0.338844532069132,0.889294796111139,0,1.97773272513395,0,1.49800055259202,1.15265491596466,0.829516898467821,0.540023753326763,0.210324961351382,0.571301968807607,2.65042249141936,0.367472397644862,1.0543001812006,0,1.10115880999389,1.14918604276669,1.53606533256243,1.18697658957174,1.18933936683133,0.52091337055676,1.3959149950069,1.68828783009504,1.22238598221448,2.65165726926301,0.996601765593721,1.1183966749518,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0.448026887097336,0.561777680527007,0.340860645156116,0.259786004602869,0,0.563373679106722,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0.742210695324124,0.346970653532272,0.608930956624282,1.38369298353635,0.60289056221049,0.117588707135705,1.25666591329675,0.494389935468748,1.59059292611903,0,0.485300549842228,0.220841518460394,1.45462575940567,0,2.04946557908083,2.30391377494801,0.766371165625774,0,0,0,1.3481157546434,0.915001205637253,1.38219787324151,0.869121600961382,0.767146371990992,1.87009240103604,1.29793010454206,0.305518091550949,0.622034853050465,0.758168275301024,0.210441855886474,0.260240885925407,0.229902104433473,0.540186389416048,0.60281927134286,0.476255494059295,0.768682321709099,1.21812241927647,1.29351685369508,0.215567992932842,0.378212160335639,0.351902248327898,0.219195732427575,0.278047249225598,0.696504333044333,0,0.199034266818493,0,0,0.852490498186778,1.03562886267751,0.234526059981096,1.2604344302271,0.710234206755631,1.57411385397923,1.3884040159864,2.79040733700489,4.56064782379353,3.73649095574942,4.44311594766397,5.08919138645195,4.86412857275134,6.14039947186396,4.83010253640311,4.83143107537338,1.05144974282064,0.617427674275707,0.330418782983798,0,0,0,0.128867461322093,0.605050573870028,0.667134131534611,0.190225626112559,0.474529061544512,0.988193728344065,0.502670417600539,0.198956472041151,0.58489226135736,0.898819408654221,0.864552199498777,0.398282546508734,0.569003702859245,0.228497025219458,3.38123207019241,0.407302655690628,0.581857461502877,0.771494018793504,1.20149420536089,1.47610147979602,1.09899109488962,2.59134044235781,0.296452627087149,0.333690211432188,0.196558995113203,0.449724224769707,0.405720242777006,0.482354319504834,0.25462585178142,0.575392274901621,0.486405680325106,0.274561413188081,0,0.372140947668503,0.936113019343682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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70266 | |||
|HGNC= | |||
|MCL_coexpression_id=10 | |||
|TSSclassifier=NA | |||
|UniProt=Q05CI8,Q8BTY1 | |||
|association_with_transcript=0bp_to_NM_172404,uc008jbo.1,uc008jbr.1,uc008jbs.1_5end | |||
|cluster_id=chr2:30061219..30061236,- | |||
|description=CAGE_peak_5_at_Ccbl1_5end | |||
|id=chr2:30061219..30061236,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!2.68e-09!43;UBERON:0002346!2.84e-09!71;UBERON:0003075!2.84e-09!71;UBERON:0007284!2.84e-09!71;UBERON:0000025!2.93e-09!114;UBERON:0004111!3.16e-09!122;UBERON:0000033!3.76e-09!63;UBERON:0001049!6.09e-09!52;UBERON:0005068!6.09e-09!52;UBERON:0006241!6.09e-09!52;UBERON:0007135!6.09e-09!52;UBERON:0001017!8.53e-09!73;UBERON:0005743!8.53e-09!73;UBERON:0000955!1.65e-08!50;UBERON:0006238!1.65e-08!50;UBERON:0004121!1.93e-08!102;UBERON:0000924!1.93e-08!102;UBERON:0006601!1.93e-08!102;UBERON:0000073!4.45e-08!75;UBERON:0001016!4.45e-08!75;UBERON:0002616!4.59e-08!49;UBERON:0007100!1.92e-07!18;UBERON:0000948!1.92e-07!18;UBERON:0005498!1.92e-07!18;UBERON:0004140!1.92e-07!18;UBERON:0009881!1.92e-07!18;UBERON:0004141!1.92e-07!18;UBERON:0003084!1.92e-07!18;UBERON:0007005!1.92e-07!18;UBERON:0004139!1.92e-07!18;UBERON:0004291!1.92e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.81e-15,92;UBERON:0003103,1.08e-12,43;UBERON:0007100,1.14e-11,18;UBERON:0000948,1.14e-11,18;UBERON:0005498,1.14e-11,18;UBERON:0004140,1.14e-11,18;UBERON:0009881,1.14e-11,18;UBERON:0004141,1.14e-11,18;UBERON:0003084,1.14e-11,18;UBERON:0007005,1.14e-11,18;UBERON:0004139,1.14e-11,18;UBERON:0004291,1.14e-11,18;UBERON:0004535,8.99e-10,23;UBERON:0001009,8.99e-10,23;UBERON:0001017,9.36e-09,73;UBERON:0000073,2.27e-08,54;UBERON:0001016,2.62e-08,75;UBERON:0000025,2.89e-07,114;UBERON:0004111,3.10e-07,122;UBERON:0001049,3.31e-07,52;UBERON:0005068,3.31e-07,52;UBERON:0006241,3.31e-07,52;UBERON:0007135,3.31e-07,52;UBERON:0002346,7.84e-07,64;UBERON:0003075,7.84e-07,64;UBERON:0007284,7.84e-07,64 | |||
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| |||
|short_description=p5@Ccbl1 | |||
}} |
Latest revision as of 12:56, 26 September 2015
Short description: | p5@Ccbl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ccbl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 0bp_to_NM_172404, uc008jbo.1, uc008jbr.1, uc008jbs.1_5end |
EntrezGene: | Ccbl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.81e-15 | 92 |
compound organ | 1.08e-12 | 43 |
primary circulatory organ | 1.14e-11 | 18 |
heart | 1.14e-11 | 18 |
primitive heart tube | 1.14e-11 | 18 |
primary heart field | 1.14e-11 | 18 |
anterior lateral plate mesoderm | 1.14e-11 | 18 |
heart tube | 1.14e-11 | 18 |
heart primordium | 1.14e-11 | 18 |
cardiac mesoderm | 1.14e-11 | 18 |
cardiogenic plate | 1.14e-11 | 18 |
heart rudiment | 1.14e-11 | 18 |
cardiovascular system | 8.99e-10 | 23 |
circulatory system | 8.99e-10 | 23 |
central nervous system | 9.36e-09 | 73 |
regional part of nervous system | 2.27e-08 | 54 |
nervous system | 2.62e-08 | 75 |
tube | 2.89e-07 | 114 |
anatomical conduit | 3.10e-07 | 122 |
neural tube | 3.31e-07 | 52 |
neural rod | 3.31e-07 | 52 |
future spinal cord | 3.31e-07 | 52 |
neural keel | 3.31e-07 | 52 |
neurectoderm | 7.84e-07 | 64 |
neural plate | 7.84e-07 | 64 |
presumptive neural plate | 7.84e-07 | 64 |