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FFCP PHASE1:Mm9::chr2:29921939..29921981,+: Difference between revisions

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(Created page with "{{FFCP |id=chr2:29921939..29921981,+ |short_description=p1@Gm9531,p1@LOC100504508,p2@Set |description=CAGE_peak_1_at_Gm9531_5end,CAGE_peak_1_at_LOC100504508_5end,CAGE_peak_...")
 
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{{FFCP
{{FFCP
|id=chr2:29921939..29921981,+
|DHSsupport=NA
|short_description=p1@Gm9531,p1@LOC100504508,p2@Set
|DPIdataset=NA
|description=CAGE_peak_1_at_Gm9531_5end,CAGE_peak_1_at_LOC100504508_5end,CAGE_peak_2_at_Set_5end
|association_with_transcript=0bp_to_ENSMUST00000067996_5end
|EntrezGene=100504508,56086,671392
|EntrezGene=100504508,56086,671392
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=Q9EQU5
|UniProt=Q9EQU5
|association_with_transcript=0bp_to_ENSMUST00000067996_5end
|cluster_id=chr2:29921939..29921981,+
|description=CAGE_peak_1_at_Gm9531_5end,CAGE_peak_1_at_LOC100504508_5end,CAGE_peak_2_at_Set_5end
|id=chr2:29921939..29921981,+
|ontology_enrichment_celltype=CL:0000117!2.93e-09!23;CL:0000337!2.93e-09!23;CL:0000540!2.92e-07!33;CL:0000047!2.92e-07!33;CL:0000031!2.92e-07!33;CL:0000404!2.92e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.93e-09,23;CL:0000337,2.93e-09,23;CL:0000540,2.92e-07,33;CL:0000047,2.92e-07,33;CL:0000031,2.92e-07,33;CL:0000404,2.92e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!2.03e-14!34;UBERON:0000073!9.07e-14!75;UBERON:0001016!9.07e-14!75;UBERON:0001049!1.24e-13!52;UBERON:0005068!1.24e-13!52;UBERON:0006241!1.24e-13!52;UBERON:0007135!1.24e-13!52;UBERON:0000955!1.55e-13!50;UBERON:0006238!1.55e-13!50;UBERON:0002616!5.54e-13!49;UBERON:0002791!6.18e-13!29;UBERON:0003528!6.18e-13!29;UBERON:0001893!6.18e-13!29;UBERON:0001017!6.90e-13!73;UBERON:0005743!6.90e-13!73;UBERON:0003080!1.82e-12!40;UBERON:0000033!3.82e-12!63;UBERON:0002780!5.00e-12!39;UBERON:0001890!5.00e-12!39;UBERON:0006240!5.00e-12!39;UBERON:0004121!1.01e-11!102;UBERON:0000924!1.01e-11!102;UBERON:0006601!1.01e-11!102;UBERON:0003056!1.98e-11!49;UBERON:0002346!2.43e-11!71;UBERON:0003075!2.43e-11!71;UBERON:0007284!2.43e-11!71;UBERON:0000153!2.79e-11!94;UBERON:0007811!4.78e-11!86;UBERON:0000956!1.31e-09!21;UBERON:0001869!1.31e-09!21;UBERON:0000203!1.31e-09!21;UBERON:0002619!1.13e-07!17;UBERON:0002021!1.84e-07!10;UBERON:0000411!1.84e-07!10;UBERON:0001950!1.84e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.38e-14,54;UBERON:0002020,2.03e-14,34;UBERON:0001016,9.07e-14,75;UBERON:0001049,1.24e-13,52;UBERON:0005068,1.24e-13,52;UBERON:0006241,1.24e-13,52;UBERON:0007135,1.24e-13,52;UBERON:0003528,6.18e-13,29;UBERON:0002791,6.18e-13,29;UBERON:0001893,6.18e-13,29;UBERON:0001017,6.90e-13,73;UBERON:0010371,1.11e-12,73;UBERON:0002346,1.72e-12,64;UBERON:0003075,1.72e-12,64;UBERON:0007284,1.72e-12,64;UBERON:0004121,1.73e-12,95;UBERON:0000924,1.73e-12,95;UBERON:0006601,1.73e-12,95;UBERON:0003080,1.82e-12,40;UBERON:0000955,4.09e-12,47;UBERON:0006238,4.09e-12,47;UBERON:0002780,5.00e-12,39;UBERON:0001890,5.00e-12,39;UBERON:0006240,5.00e-12,39;UBERON:0002616,1.40e-11,46;UBERON:0003056,1.98e-11,49;UBERON:0000956,1.31e-09,21;UBERON:0001869,1.31e-09,21;UBERON:0000203,1.31e-09,21;UBERON:0002619,1.13e-07,17;UBERON:0002021,1.84e-07,10;UBERON:0000411,1.84e-07,10;UBERON:0001950,1.84e-07,10;UBERON:0010314,1.90e-07,92
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1.5565714679327,16.7270636811575,10.2630404960703,12.2726555210187,11.819444168723,13.8730649251536,8.68420321055012,11.1841076355647,140.923234671048,29.1557264785759,21.1786867785085,22.3618866595655,18.8573342277487,22.6401208157643,21.00694571759,24.0878111961308,14.8900269084509,45.6593988361151,62.7905413642147,15.8005560314089,21.2861476054672,16.8445969750317,18.3188360398691,17.0075360884107,21.6562676711579,18.5100992260752,18.7565699511713,16.1546319917036,17.67997914396,17.3421038435366,17.9322500561144,15.6825301873737,12.739582337791,18.1384306892169,48.6149237889202,40.4609493308735,49.6938464437672,16.6143050867684,11.4486310025221,12.6374620744413,14.1483130192183,14.5455910170255,41.2268845110459,45.5721984142105,49.2690141557881,33.1676641923317,47.955776383945,60.431511791176,61.4270475210943,50.4359747611127,54.3770890781045,52.2937914869338,44.628559461196,35.5132137326918,18.4392294214465,17.5036836289172,28.7170032800336,28.6795873182022,20.4466989577486,18.7491902087394,15.7250412699989,17.9415020352296,14.9552786935241,17.5422497489051,20.3202071209645,24.5856585234698,27.3392832228719,29.0539151682675,26.4216263154271,20.0625589282253,17.3076078337389,22.5214347805628,16.4577241144999,18.8124354528898,15.7367885365232,14.0986024133359,19.0100948438968,20.3075058940024,17.9269413415317,15.2580432633949,21.592854101492,15.1508413347589,26.4556090416908,21.8679950873751,19.6430900721451,23.8602735426388,21.4126338189067,17.7365510335942,20.1181183263051,18.4789106481537,23.1458881803301,18.3090877869198,21.5637087126992
|phase1_expression=19.2178616525753,10.8182376368202,8.64498554840118,12.7034968748869,6.51164448930251,16.787927191189,17.7545606852599,13.4288256379239,19.42884365693,19.8954847373694,41.6059662787977,37.3333704098174,12.1552518251156,10.5778686926987,29.3136590397783,24.2970320867791,29.3815988813822,19.0854610041734,20.0187073064379,15.7024171165271,32.4014935475576,14.8936426801328,18.2839852397255,12.6394014006791,11.6998733344257,12.0588712464154,11.1998119001359,16.1603424514417,5.89072600314759,12.6015064879965,10.4213340007993,8.89042942843484,16.6067492647834,0,13.8648777480612,14.7948834369058,14.2918549383658,10.0447591376858,16.4080422349998,16.7527598071615,8.82347232046521,16.3930916390027,12.1377588257788,8.18329316841252,9.93493925951243,12.2976323948327,6.25913075478431,16.133861572153,10.9843091367236,14.1933826324227,17.2183298599196,15.8127820801469,21.8117387875057,10.8804321301702,14.452033363126,11.3194151855817,10.601737277734,7.21940929188419,34.191481885272,21.6886301501533,19.0149421051854,14.5703148789727,9.78224275722253,17.997994345628,11.8663963508037,7.8152812644071,14.3808053048834,9.22123932771731,38.6762253910622,31.5913895696156,29.6558195505449,28.2794474559766,32.6885440608388,32.4600617919628,42.7470800741334,30.3342199581307,26.4278114398533,48.7765631485417,41.9345835789545,29.4106421638332,41.3524149082892,34.3802824567462,34.0603258781685,19.6966913511088,31.0180442986925,20.9186295686304,27.620106075026,29.2647129945722,38.0145490532584,31.5133405645296,6.66688324013859,19.7897491705719,12.9194553404473,19.9690180905992,10.3964226791627,8.06448396775204,21.6284407002898,21.6446509674133,21.5622383820381,27.5604868118065,24.6475984609191,19.2489716121477,38.2207859559969,63.9960032837998,13.4224445426953,17.4818307177818,17.1878311305026,21.2382016277452,22.5275958773039,16.0317510190011,21.685665845767,14.9188084372949,17.2961622942044,19.2924979907357,18.6966044345771,14.9543243682314,10.1349936771093,13.3031408366319,11.4999371753484,26.0444628415329,26.0592991783264,22.7891368973554,0,28.3997373101201,14.6612694769419,10.7291963187608,13.4192939446631,19.7967901227825,15.629637929987,32.3547781114417,53.9850711325979,39.2041578592137,62.5767552692195,57.5359778993244,45.7133698031032,40.8847982930749,18.9421216761588,19.9051152976149,30.8321765289083,15.1518136238261,22.5108366325477,17.4725599369439,26.4691330813863,19.2902166829715,22.4520447199382,18.3202620007335,19.021450085625,13.1938719076898,36.862126791516,25.9075329829912,23.4014995138052,18.6316372563439,13.3462679628287,17.4126083261083,14.610531684964,15.5246728118425,20.3641824320838,23.9333553616685,21.0280989552739,25.2693442493312,17.3549284386011,18.9065164534066,20.1233025247429,13.3799677588235,16.3523139660621,15.5797742982773,16.6329508867764,17.3980360127083,20.899100939012,11.3275550214576,15.8084178614419,13.0117988808546,14.0512073786272,15.2995317386824,64.3487242606229,38.1776111927145,7.93005079161115,15.8670339998127,23.4617075588757,16.953277045812,24.0982152672315,16.1346819698674,15.3440850252961,11.0330863145284,10.9141684155238,11.5289268306808,10.0534083520108,12.9321706826748,12.8676297498619,7.19055526923377,11.2391785934841,9.95706366271836,22.3808123124636,19.3079986310442,16.9061603509621,15.2738495883986,15.3222464862424,17.1131400532377,14.4179304643307,15.0562350939194,8.32093257559286,13.3268937035545,17.7871576252289,28.8642032888843,31.6459982132257,21.8116249013308,23.3289139596778,22.9118301764796,15.0229252551038,14.3848068725405,13.943629502653,11.2570179407113,18.6898668485561,16.0020607497456,14.6657706363843,16.9227848224565,17.2221516981036,12.5435315554475,12.1937105509959,21.9810037653762,27.7040459951444,21.5576258934489,22.5302638356962,16.4156132292979,12.1402256851867,16.1960927721973,14.5024332577696,14.1737401375216,13.5536553358864,7.37384916220821,12.6060036762104,10.1254341007058,9.04747703635634,13.5976420954677,13.769399644533,12.6930903300177,30.9862638676438,30.7094618871572,32.9509240207118,22.7223834483936,22.085575359138,17.5697434933487,15.5104846367615,17.6836910484888,18.2694912747563,18.9661275628518,17.0020494703456,15.7818163272108,18.9738133414331,44.6636629826312,18.7360912474915,17.2723635557238,21.1753047159649,13.1976098378028,23.8941249011933,16.2663026223838,20.5580018736031,17.3516673375426,14.1744908582771,17.5238034328039,15.247269296925,14.1778154496227,11.0514187299264,17.3820216864699,15.8127912862498,24.7525303795648,18.7241783164583,26.2889197285713,20.9561067728062,15.2179294872431,21.6355085043574,17.8368817602071,15.4676079365994,14.6143175575008,24.4058576386259,8.68511490541663,11.2469483008031,26.5466867235783,16.3079070962865,31.9658502119226,24.1132134886336,24.4569940620141,9.61886760878507,37.826761610144,19.1375386493595,20.0195261924326,16.2971184085346,15.4462134743847,18.5904149700594,19.2173665493479,14.9581018394593,13.2953879707475,15.0637971446822,15.2747298882418,23.8833675153757,17.2821547057821,11.5565714679327,16.7270636811575,10.2630404960703,12.2726555210187,11.819444168723,13.8730649251536,8.68420321055012,11.1841076355647,140.923234671048,29.1557264785759,21.1786867785085,22.3618866595655,18.8573342277487,22.6401208157643,21.00694571759,24.0878111961308,14.8900269084509,45.6593988361151,62.7905413642147,15.8005560314089,21.2861476054672,16.8445969750317,18.3188360398691,17.0075360884107,21.6562676711579,18.5100992260752,18.7565699511713,16.1546319917036,17.67997914396,17.3421038435366,17.9322500561144,15.6825301873737,12.739582337791,18.1384306892169,48.6149237889202,40.4609493308735,49.6938464437672,16.6143050867684,11.4486310025221,12.6374620744413,14.1483130192183,14.5455910170255,41.2268845110459,45.5721984142105,49.2690141557881,33.1676641923317,47.955776383945,60.431511791176,61.4270475210943,50.4359747611127,54.3770890781045,52.2937914869338,44.628559461196,35.5132137326918,18.4392294214465,17.5036836289172,28.7170032800336,28.6795873182022,20.4466989577486,18.7491902087394,15.7250412699989,17.9415020352296,14.9552786935241,17.5422497489051,20.3202071209645,24.5856585234698,27.3392832228719,29.0539151682675,26.4216263154271,20.0625589282253,17.3076078337389,22.5214347805628,16.4577241144999,18.8124354528898,15.7367885365232,14.0986024133359,19.0100948438968,20.3075058940024,17.9269413415317,15.2580432633949,21.592854101492,15.1508413347589,26.4556090416908,21.8679950873751,19.6430900721451,23.8602735426388,21.4126338189067,17.7365510335942,20.1181183263051,18.4789106481537,23.1458881803301,18.3090877869198,21.5637087126992
|short_description=p1@Gm9531,p1@LOC100504508,p2@Set
}}
}}

Latest revision as of 12:47, 26 September 2015

Short description:p1@Gm9531, p1@LOC100504508, p2@Set
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gm9531_5end, CAGE_peak_1_at_LOC100504508_5end, CAGE_peak_2_at_Set_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 0bp_to_ENSMUST00000067996_5end
EntrezGene:100504508,56086,671392
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gm9531p1@LOC100504508p2@Set

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G719.22
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I312.70
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I716.79
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.75
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E719.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F219.90
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E641.61
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F137.33
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E412.16
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E810.58
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A129.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A324.30
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A529.38
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A219.09
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A420.02
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A615.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A332.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H214.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I918.28
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D112.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.70
GP2+ M cell, pool1.CNhs13228.11845-124H912.06
GP2+ M cell, pool2.CNhs13231.11846-124I111.20
GP2+ M cell, pool3.CNhs13240.11847-124I216.16
Ileum epithelium, pool1.CNhs13199.10252-104B95.89
Ileum epithelium, pool2.CNhs13232.10253-104C112.60
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G616.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.86
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F614.79
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F714.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G810.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H116.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316.75
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H216.39
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H412.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.18
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D99.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C216.13
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C417.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A221.81
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.88
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A114.45
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.22
Mouse Granule cells, donor1.CNhs12131.11713-123C334.19
Mouse Granule cells, donor2.CNhs12357.11731-123E321.69
Mouse Granule cells, donor3.CNhs12108.11636-122C719.01
Mouse Meningeal cells, donor1.CNhs12132.11716-123C614.57
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C718.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E711.87
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C814.38
Mouse Microglia, donor2.CNhs12634.11736-123E89.22
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D538.68
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F531.59
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D929.66
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F128.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D532.69
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D232.46
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F242.75
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D630.33
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D326.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F348.78
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D741.93
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D429.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F441.35
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D834.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E434.06
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I631.02
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D620.92
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F627.62
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E129.26
Mouse Schwann, donor1.CNhs12507.11728-123D938.01
Mouse Schwann, donor2.CNhs12573.11746-123F931.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.67
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F719.79
Mouse hepatocyte, donor1.CNhs13078.11714-123C412.92
Mouse hepatocyte, donor3.CNhs12615.11637-122C819.97
Mouse hepatocyte, donor6.CNhs13090.11822-124F410.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A721.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I721.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E321.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I827.56
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G624.65
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I838.22
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B664.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G113.42
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G217.48
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G317.19
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B621.24
accessory axillary lymph node, adult.CNhs10475.1063-29H922.53
adrenal gland, adult.CNhs10508.49-24D716.03
adrenal gland, embryo E14.CNhs11038.406-44C521.69
adrenal gland, embryo E16.CNhs11004.1254-43D614.92
adrenal gland, embryo E17.CNhs11043.1263-45I117.30
adrenal gland, embryo E18.CNhs11026.1262-18F519.29
adrenal gland, neonate N00.CNhs11191.1311-23C118.70
adrenal gland, neonate N25.CNhs11223.1377-27I314.95
amnion, adult pregnant day17.5.CNhs10488.583-22A810.13
aorta, adult.CNhs10498.46-23H113.30
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F526.04
bone (os femoris), neonate N16.CNhs11225.1525-43A626.06
bone (os femoris), neonate N20.CNhs11195.1350-25C322.79
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B228.40
cerebellum, neonate N30.CNhs11135.1395-42I214.66
colon, adult.CNhs10468.36-18H710.73
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C713.42
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D119.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D415.63
corpora quadrigemina, adult.CNhs10501.16-22A432.35
corpus striatum, adult.CNhs10487.19-21D853.99
corpus striatum, neonate N00.CNhs11226.630-43F139.20
cortex, adult.CNhs10473.12-14D562.58
cortex, neonate N30.CNhs11107.1392-42F257.54
diencephalon, adult.CNhs10482.20-12F245.71
diencephalon, neonate N30.CNhs11201.1388-42B240.88
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B118.94
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A219.91
epididymis, adult.CNhs10490.58-23B230.83
eyeball, adult.CNhs10484.31-12G415.15
eyeball, embryo E12.CNhs11016.345-16C622.51
eyeball, embryo E14.CNhs10521.399-16E217.47
eyeball, embryo E15.CNhs10593.426-16C926.47
eyeball, embryo E17.CNhs11023.1261-18D419.29
eyeball, neonate N00.CNhs11207.633-15C622.45
eyeball, neonate N01.CNhs11140.1532-43E718.32
eyeball, neonate N02.CNhs11205.1551-44G819.02
eyeball, neonate N16.CNhs11188.777-19A213.19
forelimb, embryo E11.CNhs10596.335-25E236.86
forelimb, embryo E12.CNhs10600.359-14H225.91
forelimb, embryo E13.CNhs10589.384-1E223.40
forelimb, embryo E14.CNhs10577.413-26A818.63
forelimb, embryo E15.CNhs11007.437-20E713.35
forelimb, embryo E17.CNhs10598.1517-43C417.41
forelimb, embryo E18.CNhs11008.1520-43B514.61
gonad, embryo E13.CNhs11044.1564-45I615.52
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C820.36
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D223.93
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D521.03
heart, embryo E11.CNhs10586.331-24E925.27
heart, embryo E12.CNhs11015.353-12F517.35
heart, embryo E13.CNhs11013.376-3I918.91
heart, embryo E14.CNhs10597.403-26D420.12
heart, embryo E15.CNhs11017.431-16C813.38
heart, embryo E16.CNhs11021.457-17C616.35
heart, embryo E17.CNhs11025.479-18E515.58
heart, embryo E18.CNhs11030.1283-20G316.63
heart, neonate N00.CNhs11213.639-21E317.40
heart, neonate N03.CNhs11221.1349-25I220.90
heart, neonate N10.CNhs11118.749-24G111.33
heart, neonate N16.CNhs11209.782-15G115.81
heart, neonate N20.CNhs11127.821-26I613.01
heart, neonate N25.CNhs11196.1351-25D314.05
heart, neonate N30.CNhs11202.1390-42D215.30
hippocampus, adult.CNhs10478.13-16E864.35
hippocampus, neonate N00.CNhs11228.627-43G138.18
intestinal mucosa, adult.CNhs10506.860-29I37.93
intestine, adult.CNhs10496.178-9A315.87
intestine, embryo E12.CNhs11019.1251-16I523.46
intestine, embryo E13.CNhs11010.381-16D516.95
intestine, embryo E15.CNhs10602.976-16D824.10
intestine, embryo E16.CNhs10585.463-22H416.13
intestine, embryo E17.CNhs10582.482-18D315.34
intestine, embryo E18.CNhs10526.1289-20F711.03
intestine, neonate N00.CNhs11126.644-26D110.91
intestine, neonate N01.CNhs11192.1322-23E911.53
intestine, neonate N06.CNhs11102.688-20B810.05
intestine, neonate N07.CNhs11095.720-20F212.93
intestine, neonate N10.CNhs11098.755-23A512.87
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E311.24
intestine, neonate N30.CNhs11131.1384-42G19.96
kidney, embryo E14.CNhs10606.411-4I922.38
kidney, embryo E15.CNhs10997.434-16F819.31
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I215.27
kidney, embryo E18.CNhs11001.1288-20C715.32
kidney, neonate N00.CNhs11214.646-21G717.11
kidney, neonate N10.CNhs11206.758-6D514.42
kidney, neonate N20.CNhs11113.832-19I115.06
kidney, neonate N25.CNhs11122.1353-25F38.32
kidney, neonate N30.CNhs11203.1385-42H113.33
liver, adult pregnant day01.CNhs10466.508-5B217.79
liver, embryo E12.CNhs10601.355-15F828.86
liver, embryo E13.CNhs10524.378-3H631.65
liver, embryo E14.CNhs10594.409-16E121.81
liver, embryo E15.CNhs10520.433-16D723.33
liver, embryo E16.CNhs10523.462-17F522.91
liver, embryo E17.CNhs10510.481-18A315.02
liver, embryo E18.CNhs10579.499-43G414.38
liver, neonate N00.CNhs11117.641-24F413.94
liver, neonate N03.CNhs11123.1345-25G211.26
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H216.00
liver, neonate N10.CNhs11115.751-24B914.67
liver, neonate N20.CNhs11220.823-25A316.92
liver, neonate N25.CNhs11198.1368-26H117.22
liver, neonate N30.CNhs11106.1382-42D112.54
lung, adult.CNhs10474.28-22B112.19
lung, embryo E12.CNhs10522.354-16G221.98
lung, embryo E14.CNhs10604.404-26F827.70
lung, embryo E15.CNhs11020.432-17C521.56
lung, embryo E16.CNhs10998.458-17B622.53
lung, embryo E17.CNhs10605.480-44A616.42
lung, embryo E18.CNhs10583.1287-20I612.14
lung, neonate N00.CNhs11224.640-42C616.20
lung, neonate N06.CNhs11212.683-20E514.50
lung, neonate N07.CNhs11111.715-19A314.17
lung, neonate N10.CNhs11219.750-23E613.55
lung, neonate N20.CNhs11109.822-18A47.37
lung, neonate N25.CNhs11119.1359-25C712.61
lung, neonate N30.CNhs11133.1394-42H210.13
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A113.60
mammary gland, adult lactating day02.CNhs10480.595-22B613.77
mammary gland, adult pregnant day19.CNhs10476.588-5H212.69
medulla oblongata, adult.CNhs10477.17-12C230.99
medulla oblongata, neonate N30.CNhs11200.1396-42A330.71
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C732.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C222.72
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E122.09
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E217.57
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D717.68
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D818.27
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.97
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.78
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.97
olfactory brain, adult.CNhs10489.18-22I944.66
ovary, adult.CNhs10507.91-2I718.74
ovary, embryo E18.CNhs11040.505-44H717.27
ovary, neonate N00.CNhs11217.1299-22I421.18
oviduct, adult pregnant day01.CNhs10500.988-6G613.20
pancreas, adult.CNhs10486.34-16E423.89
pancreas, embryo E14.CNhs11012.405-44F416.27
pancreas, embryo E15.CNhs11042.1556-45F220.56
pancreas, embryo E16.CNhs11003.460-26E517.35
pancreas, embryo E17.CNhs10599.1558-45G314.17
pancreas, embryo E18.CNhs10580.1535-43I717.52
pancreas, neonate N00.CNhs11105.645-26G915.25
pancreas, neonate N01.CNhs11138.1531-43D714.18
pancreas, neonate N02.CNhs11139.1539-43D811.05
pancreas, neonate N16.CNhs11136.787-43B617.38
pancreas, neonate N25.CNhs11094.1555-45E215.81
pancreas, neonate N30.CNhs11182.1548-44H524.75
pituitary gland, adult.CNhs10493.21-1G818.72
pituitary gland, embryo E12.CNhs11018.346-16E626.29
pituitary gland, embryo E13.CNhs11009.370-44C720.96
pituitary gland, embryo E14.CNhs11037.398-44A515.22
pituitary gland, embryo E15.CNhs10592.427-16B921.64
pituitary gland, embryo E16.CNhs11036.449-43F617.84
pituitary gland, embryo E17.CNhs11039.1265-44F515.47
pituitary gland, neonate N00.CNhs11190.1308-22E914.61
placenta, adult pregnant day10.CNhs10472.539-13I724.41
placenta, adult pregnant day17.CNhs10464.577-18G38.69
prostate, adult.CNhs10470.859-1F811.25
skin, adult.CNhs10492.30-1C326.55
skin, neonate N00.CNhs11124.650-25G416.31
skin, neonate N03.CNhs11215.662-22H331.97
skin, neonate N06.CNhs11097.693-20I524.11
skin, neonate N10.CNhs11108.762-6C424.46
small intestine, neonate N16.CNhs11114.790-21I19.62
spinal cord, adult.CNhs10505.24-13C937.83
spleen, adult.CNhs10465.25-2G219.14
spleen, embryo E16.CNhs11035.461-43C120.02
spleen, embryo E18.CNhs11011.1271-21F216.30
spleen, neonate N10.CNhs11116.752-24D115.45
spleen, neonate N20.CNhs11112.824-19H118.59
spleen, neonate N25.CNhs11099.1354-25G319.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C913.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D315.06
stomach, adult.CNhs10503.33-1H615.27
stomach, embryo E12.CNhs10588.356-43E323.88
stomach, embryo E15.CNhs10603.1252-16G817.28
stomach, embryo E16.CNhs11022.459-17D411.56
stomach, embryo E17.CNhs11006.1035-18D516.73
stomach, embryo E18.CNhs10999.1286-20C610.26
stomach, neonate N03.CNhs11193.1340-24B812.27
stomach, neonate N07.CNhs11210.718-18A911.82
stomach, neonate N25.CNhs11104.1355-25E413.87
stomach, neonate N30.CNhs11134.1386-42I18.68
submandibular gland, adult.CNhs10469.59-29C111.18
testis, adult.CNhs10504.57-7G5140.92
testis, embryo E13.CNhs11031.389-23F529.16
testis, embryo E15.CNhs11034.443-27C521.18
testis, embryo E16.CNhs11033.470-26G522.36
testis, embryo E17.CNhs11029.486-18I518.86
testis, embryo E18.CNhs11027.503-18G522.64
testis, neonate N00.CNhs11189.1300-22B721.01
testis, neonate N07.CNhs11222.726-26I424.09
testis, neonate N10.CNhs11204.763-44D914.89
testis, neonate N20.CNhs11110.839-18H345.66
testis, neonate N30.CNhs11130.1391-42E262.79
thymus, adult.CNhs10471.38-12B515.80
thymus, embryo E14.CNhs11041.402-44I421.29
thymus, embryo E15.CNhs11005.430-45I216.84
thymus, embryo E16.CNhs11002.456-26C518.32
thymus, embryo E17.CNhs10581.478-18C117.01
thymus, embryo E18.CNhs10595.1273-19G421.66
thymus, neonate N02.CNhs11181.1541-43F818.51
thymus, neonate N03.CNhs11137.2104-43C718.76
thymus, neonate N06.CNhs11197.681-26C416.15
thymus, neonate N07.CNhs11211.713-19D317.68
thymus, neonate N10.CNhs11194.748-24E417.34
thymus, neonate N20.CNhs11186.820-7A217.93
thymus, neonate N25.CNhs11125.1362-25G715.68
thymus, neonate N30.CNhs11132.1393-42G212.74
tongue, adult.CNhs10499.32-1B418.14
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H348.61
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F740.46
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G549.69
urinary bladder, adult.CNhs10481.879-12E416.61
uterus, adult pregnant day19.CNhs10497.590-15F511.45
uterus, adult.CNhs10509.92-27E512.64
vagina, adult.CNhs10502.89-27D514.15
vesicular gland, adult.CNhs10491.51-27F814.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A141.23
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A245.57
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A349.27
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D733.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A447.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A560.43
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A661.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A750.44
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A854.38
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A952.29
whole body, embryo E11.CNhs11014.324-5I844.63
whole body, embryo E12.CNhs10587.857-27C935.51
whole body, embryo E13.CNhs10512.372-23H218.44
whole body, embryo E14.5.CNhs10578.420-27D217.50
whole body, embryo E14.CNhs10519.395-14B128.72
whole body, embryo E16.CNhs10514.453-14F228.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.75
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.73
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G517.94
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.96
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G517.54
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G520.32
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G524.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G527.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G529.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G526.42
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G520.06
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G517.31
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.52
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.81
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.74
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G519.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.31
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G521.59
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.15
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G526.46
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G521.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G523.86
whole body, embryo E17.5.CNhs10513.490-9F921.41
whole body, embryo E17.CNhs10517.475-3I517.74
whole body, embryo E18.CNhs10516.493-3B320.12
whole body, neonate N00.CNhs10525.657-19C218.48
whole body, neonate N01.CNhs10576.659-23C623.15
whole body, neonate N06.CNhs10515.692-21D118.31
whole body, neonate N10.CNhs10518.761-6B421.56





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.93e-0923
neuroblast (sensu Vertebrata)2.93e-0923
neuron2.92e-0733
neuronal stem cell2.92e-0733
neuroblast2.92e-0733
electrically signaling cell2.92e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.38e-1454
gray matter2.03e-1434
nervous system9.07e-1475
neural tube1.24e-1352
neural rod1.24e-1352
future spinal cord1.24e-1352
neural keel1.24e-1352
brain grey matter6.18e-1329
regional part of telencephalon6.18e-1329
telencephalon6.18e-1329
central nervous system6.90e-1373
ecto-epithelium1.11e-1273
neurectoderm1.72e-1264
neural plate1.72e-1264
presumptive neural plate1.72e-1264
ectoderm-derived structure1.73e-1295
ectoderm1.73e-1295
presumptive ectoderm1.73e-1295
anterior neural tube1.82e-1240
brain4.09e-1247
future brain4.09e-1247
regional part of forebrain5.00e-1239
forebrain5.00e-1239
future forebrain5.00e-1239
regional part of brain1.40e-1146
pre-chordal neural plate1.98e-1149
cerebral cortex1.31e-0921
cerebral hemisphere1.31e-0921
pallium1.31e-0921
regional part of cerebral cortex1.13e-0717
occipital lobe1.84e-0710
visual cortex1.84e-0710
neocortex1.84e-0710
structure with developmental contribution from neural crest1.90e-0792
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