FFCP PHASE1:Mm9::chr2:29921939..29921981,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100504508,56086,671392 | |EntrezGene=100504508,56086,671392 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=Q9EQU5 | |UniProt=Q9EQU5 | ||
|association_with_transcript=0bp_to_ENSMUST00000067996_5end | |association_with_transcript=0bp_to_ENSMUST00000067996_5end | ||
|cluster_id=chr2:29921939..29921981,+ | |||
|description=CAGE_peak_1_at_Gm9531_5end,CAGE_peak_1_at_LOC100504508_5end,CAGE_peak_2_at_Set_5end | |description=CAGE_peak_1_at_Gm9531_5end,CAGE_peak_1_at_LOC100504508_5end,CAGE_peak_2_at_Set_5end | ||
|id=chr2:29921939..29921981,+ | |id=chr2:29921939..29921981,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.93e-09!23;CL:0000337!2.93e-09!23;CL:0000540!2.92e-07!33;CL:0000047!2.92e-07!33;CL:0000031!2.92e-07!33;CL:0000404!2.92e-07!33 | |ontology_enrichment_celltype=CL:0000117!2.93e-09!23;CL:0000337!2.93e-09!23;CL:0000540!2.92e-07!33;CL:0000047!2.92e-07!33;CL:0000031!2.92e-07!33;CL:0000404!2.92e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.93e-09,23;CL:0000337,2.93e-09,23;CL:0000540,2.92e-07,33;CL:0000047,2.92e-07,33;CL:0000031,2.92e-07,33;CL:0000404,2.92e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.03e-14!34;UBERON:0000073!9.07e-14!75;UBERON:0001016!9.07e-14!75;UBERON:0001049!1.24e-13!52;UBERON:0005068!1.24e-13!52;UBERON:0006241!1.24e-13!52;UBERON:0007135!1.24e-13!52;UBERON:0000955!1.55e-13!50;UBERON:0006238!1.55e-13!50;UBERON:0002616!5.54e-13!49;UBERON:0002791!6.18e-13!29;UBERON:0003528!6.18e-13!29;UBERON:0001893!6.18e-13!29;UBERON:0001017!6.90e-13!73;UBERON:0005743!6.90e-13!73;UBERON:0003080!1.82e-12!40;UBERON:0000033!3.82e-12!63;UBERON:0002780!5.00e-12!39;UBERON:0001890!5.00e-12!39;UBERON:0006240!5.00e-12!39;UBERON:0004121!1.01e-11!102;UBERON:0000924!1.01e-11!102;UBERON:0006601!1.01e-11!102;UBERON:0003056!1.98e-11!49;UBERON:0002346!2.43e-11!71;UBERON:0003075!2.43e-11!71;UBERON:0007284!2.43e-11!71;UBERON:0000153!2.79e-11!94;UBERON:0007811!4.78e-11!86;UBERON:0000956!1.31e-09!21;UBERON:0001869!1.31e-09!21;UBERON:0000203!1.31e-09!21;UBERON:0002619!1.13e-07!17;UBERON:0002021!1.84e-07!10;UBERON:0000411!1.84e-07!10;UBERON:0001950!1.84e-07!10 | |ontology_enrichment_uberon=UBERON:0002020!2.03e-14!34;UBERON:0000073!9.07e-14!75;UBERON:0001016!9.07e-14!75;UBERON:0001049!1.24e-13!52;UBERON:0005068!1.24e-13!52;UBERON:0006241!1.24e-13!52;UBERON:0007135!1.24e-13!52;UBERON:0000955!1.55e-13!50;UBERON:0006238!1.55e-13!50;UBERON:0002616!5.54e-13!49;UBERON:0002791!6.18e-13!29;UBERON:0003528!6.18e-13!29;UBERON:0001893!6.18e-13!29;UBERON:0001017!6.90e-13!73;UBERON:0005743!6.90e-13!73;UBERON:0003080!1.82e-12!40;UBERON:0000033!3.82e-12!63;UBERON:0002780!5.00e-12!39;UBERON:0001890!5.00e-12!39;UBERON:0006240!5.00e-12!39;UBERON:0004121!1.01e-11!102;UBERON:0000924!1.01e-11!102;UBERON:0006601!1.01e-11!102;UBERON:0003056!1.98e-11!49;UBERON:0002346!2.43e-11!71;UBERON:0003075!2.43e-11!71;UBERON:0007284!2.43e-11!71;UBERON:0000153!2.79e-11!94;UBERON:0007811!4.78e-11!86;UBERON:0000956!1.31e-09!21;UBERON:0001869!1.31e-09!21;UBERON:0000203!1.31e-09!21;UBERON:0002619!1.13e-07!17;UBERON:0002021!1.84e-07!10;UBERON:0000411!1.84e-07!10;UBERON:0001950!1.84e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.38e-14,54;UBERON:0002020,2.03e-14,34;UBERON:0001016,9.07e-14,75;UBERON:0001049,1.24e-13,52;UBERON:0005068,1.24e-13,52;UBERON:0006241,1.24e-13,52;UBERON:0007135,1.24e-13,52;UBERON:0003528,6.18e-13,29;UBERON:0002791,6.18e-13,29;UBERON:0001893,6.18e-13,29;UBERON:0001017,6.90e-13,73;UBERON:0010371,1.11e-12,73;UBERON:0002346,1.72e-12,64;UBERON:0003075,1.72e-12,64;UBERON:0007284,1.72e-12,64;UBERON:0004121,1.73e-12,95;UBERON:0000924,1.73e-12,95;UBERON:0006601,1.73e-12,95;UBERON:0003080,1.82e-12,40;UBERON:0000955,4.09e-12,47;UBERON:0006238,4.09e-12,47;UBERON:0002780,5.00e-12,39;UBERON:0001890,5.00e-12,39;UBERON:0006240,5.00e-12,39;UBERON:0002616,1.40e-11,46;UBERON:0003056,1.98e-11,49;UBERON:0000956,1.31e-09,21;UBERON:0001869,1.31e-09,21;UBERON:0000203,1.31e-09,21;UBERON:0002619,1.13e-07,17;UBERON:0002021,1.84e-07,10;UBERON:0000411,1.84e-07,10;UBERON:0001950,1.84e-07,10;UBERON:0010314,1.90e-07,92 | |||
|phase1_expression=19.2178616525753,10.8182376368202,8.64498554840118,12.7034968748869,6.51164448930251,16.787927191189,17.7545606852599,13.4288256379239,19.42884365693,19.8954847373694,41.6059662787977,37.3333704098174,12.1552518251156,10.5778686926987,29.3136590397783,24.2970320867791,29.3815988813822,19.0854610041734,20.0187073064379,15.7024171165271,32.4014935475576,14.8936426801328,18.2839852397255,12.6394014006791,11.6998733344257,12.0588712464154,11.1998119001359,16.1603424514417,5.89072600314759,12.6015064879965,10.4213340007993,8.89042942843484,16.6067492647834,0,13.8648777480612,14.7948834369058,14.2918549383658,10.0447591376858,16.4080422349998,16.7527598071615,8.82347232046521,16.3930916390027,12.1377588257788,8.18329316841252,9.93493925951243,12.2976323948327,6.25913075478431,16.133861572153,10.9843091367236,14.1933826324227,17.2183298599196,15.8127820801469,21.8117387875057,10.8804321301702,14.452033363126,11.3194151855817,10.601737277734,7.21940929188419,34.191481885272,21.6886301501533,19.0149421051854,14.5703148789727,9.78224275722253,17.997994345628,11.8663963508037,7.8152812644071,14.3808053048834,9.22123932771731,38.6762253910622,31.5913895696156,29.6558195505449,28.2794474559766,32.6885440608388,32.4600617919628,42.7470800741334,30.3342199581307,26.4278114398533,48.7765631485417,41.9345835789545,29.4106421638332,41.3524149082892,34.3802824567462,34.0603258781685,19.6966913511088,31.0180442986925,20.9186295686304,27.620106075026,29.2647129945722,38.0145490532584,31.5133405645296,6.66688324013859,19.7897491705719,12.9194553404473,19.9690180905992,10.3964226791627,8.06448396775204,21.6284407002898,21.6446509674133,21.5622383820381,27.5604868118065,24.6475984609191,19.2489716121477,38.2207859559969,63.9960032837998,13.4224445426953,17.4818307177818,17.1878311305026,21.2382016277452,22.5275958773039,16.0317510190011,21.685665845767,14.9188084372949,17.2961622942044,19.2924979907357,18.6966044345771,14.9543243682314,10.1349936771093,13.3031408366319,11.4999371753484,26.0444628415329,26.0592991783264,22.7891368973554,0,28.3997373101201,14.6612694769419,10.7291963187608,13.4192939446631,19.7967901227825,15.629637929987,32.3547781114417,53.9850711325979,39.2041578592137,62.5767552692195,57.5359778993244,45.7133698031032,40.8847982930749,18.9421216761588,19.9051152976149,30.8321765289083,15.1518136238261,22.5108366325477,17.4725599369439,26.4691330813863,19.2902166829715,22.4520447199382,18.3202620007335,19.021450085625,13.1938719076898,36.862126791516,25.9075329829912,23.4014995138052,18.6316372563439,13.3462679628287,17.4126083261083,14.610531684964,15.5246728118425,20.3641824320838,23.9333553616685,21.0280989552739,25.2693442493312,17.3549284386011,18.9065164534066,20.1233025247429,13.3799677588235,16.3523139660621,15.5797742982773,16.6329508867764,17.3980360127083,20.899100939012,11.3275550214576,15.8084178614419,13.0117988808546,14.0512073786272,15.2995317386824,64.3487242606229,38.1776111927145,7.93005079161115,15.8670339998127,23.4617075588757,16.953277045812,24.0982152672315,16.1346819698674,15.3440850252961,11.0330863145284,10.9141684155238,11.5289268306808,10.0534083520108,12.9321706826748,12.8676297498619,7.19055526923377,11.2391785934841,9.95706366271836,22.3808123124636,19.3079986310442,16.9061603509621,15.2738495883986,15.3222464862424,17.1131400532377,14.4179304643307,15.0562350939194,8.32093257559286,13.3268937035545,17.7871576252289,28.8642032888843,31.6459982132257,21.8116249013308,23.3289139596778,22.9118301764796,15.0229252551038,14.3848068725405,13.943629502653,11.2570179407113,18.6898668485561,16.0020607497456,14.6657706363843,16.9227848224565,17.2221516981036,12.5435315554475,12.1937105509959,21.9810037653762,27.7040459951444,21.5576258934489,22.5302638356962,16.4156132292979,12.1402256851867,16.1960927721973,14.5024332577696,14.1737401375216,13.5536553358864,7.37384916220821,12.6060036762104,10.1254341007058,9.04747703635634,13.5976420954677,13.769399644533,12.6930903300177,30.9862638676438,30.7094618871572,32.9509240207118,22.7223834483936,22.085575359138,17.5697434933487,15.5104846367615,17.6836910484888,18.2694912747563,18.9661275628518,17.0020494703456,15.7818163272108,18.9738133414331,44.6636629826312,18.7360912474915,17.2723635557238,21.1753047159649,13.1976098378028,23.8941249011933,16.2663026223838,20.5580018736031,17.3516673375426,14.1744908582771,17.5238034328039,15.247269296925,14.1778154496227,11.0514187299264,17.3820216864699,15.8127912862498,24.7525303795648,18.7241783164583,26.2889197285713,20.9561067728062,15.2179294872431,21.6355085043574,17.8368817602071,15.4676079365994,14.6143175575008,24.4058576386259,8.68511490541663,11.2469483008031,26.5466867235783,16.3079070962865,31.9658502119226,24.1132134886336,24.4569940620141,9.61886760878507,37.826761610144,19.1375386493595,20.0195261924326,16.2971184085346,15.4462134743847,18.5904149700594,19.2173665493479,14.9581018394593,13.2953879707475,15.0637971446822,15.2747298882418,23.8833675153757,17.2821547057821,1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|phase1_expression=19.2178616525753,10.8182376368202,8.64498554840118,12.7034968748869,6.51164448930251,16.787927191189,17.7545606852599,13.4288256379239,19.42884365693,19.8954847373694,41.6059662787977,37.3333704098174,12.1552518251156,10.5778686926987,29.3136590397783,24.2970320867791,29.3815988813822,19.0854610041734,20.0187073064379,15.7024171165271,32.4014935475576,14.8936426801328,18.2839852397255,12.6394014006791,11.6998733344257,12.0588712464154,11.1998119001359,16.1603424514417,5.89072600314759,12.6015064879965,10.4213340007993,8.89042942843484,16.6067492647834,0,13.8648777480612,14.7948834369058,14.2918549383658,10.0447591376858,16.4080422349998,16.7527598071615,8.82347232046521,16.3930916390027,12.1377588257788,8.18329316841252,9.93493925951243,12.2976323948327,6.25913075478431,16.133861572153,10.9843091367236,14.1933826324227,17.2183298599196,15.8127820801469,21.8117387875057,10.8804321301702,14.452033363126,11.3194151855817,10.601737277734,7.21940929188419,34.191481885272,21.6886301501533,19.0149421051854,14.5703148789727,9.78224275722253,17.997994345628,11.8663963508037,7.8152812644071,14.3808053048834,9.22123932771731,38.6762253910622,31.5913895696156,29.6558195505449,28.2794474559766,32.6885440608388,32.4600617919628,42.7470800741334,30.3342199581307,26.4278114398533,48.7765631485417,41.9345835789545,29.4106421638332,41.3524149082892,34.3802824567462,34.0603258781685,19.6966913511088,31.0180442986925,20.9186295686304,27.620106075026,29.2647129945722,38.0145490532584,31.5133405645296,6.66688324013859,19.7897491705719,12.9194553404473,19.9690180905992,10.3964226791627,8.06448396775204,21.6284407002898,21.6446509674133,21.5622383820381,27.5604868118065,24.6475984609191,19.2489716121477,38.2207859559969,63.9960032837998,13.4224445426953,17.4818307177818,17.1878311305026,21.2382016277452,22.5275958773039,16.0317510190011,21.685665845767,14.9188084372949,17.2961622942044,19.2924979907357,18.6966044345771,14.9543243682314,10.1349936771093,13.3031408366319,11.4999371753484,26.0444628415329,26.0592991783264,22.7891368973554,0,28.3997373101201,14.6612694769419,10.7291963187608,13.4192939446631,19.7967901227825,15.629637929987,32.3547781114417,53.9850711325979,39.2041578592137,62.5767552692195,57.5359778993244,45.7133698031032,40.8847982930749,18.9421216761588,19.9051152976149,30.8321765289083,15.1518136238261,22.5108366325477,17.4725599369439,26.4691330813863,19.2902166829715,22.4520447199382,18.3202620007335,19.021450085625,13.1938719076898,36.862126791516,25.9075329829912,23.4014995138052,18.6316372563439,13.3462679628287,17.4126083261083,14.610531684964,15.5246728118425,20.3641824320838,23.9333553616685,21.0280989552739,25.2693442493312,17.3549284386011,18.9065164534066,20.1233025247429,13.3799677588235,16.3523139660621,15.5797742982773,16.6329508867764,17.3980360127083,20.899100939012,11.3275550214576,15.8084178614419,13.0117988808546,14.0512073786272,15.2995317386824,64.3487242606229,38.1776111927145,7.93005079161115,15.8670339998127,23.4617075588757,16.953277045812,24.0982152672315,16.1346819698674,15.3440850252961,11.0330863145284,10.9141684155238,11.5289268306808,10.0534083520108,12.9321706826748,12.8676297498619,7.19055526923377,11.2391785934841,9.95706366271836,22.3808123124636,19.3079986310442,16.9061603509621,15.2738495883986,15.3222464862424,17.1131400532377,14.4179304643307,15.0562350939194,8.32093257559286,13.3268937035545,17.7871576252289,28.8642032888843,31.6459982132257,21.8116249013308,23.3289139596778,22.9118301764796,15.0229252551038,14.3848068725405,13.943629502653,11.2570179407113,18.6898668485561,16.0020607497456,14.6657706363843,16.9227848224565,17.2221516981036,12.5435315554475,12.1937105509959,21.9810037653762,27.7040459951444,21.5576258934489,22.5302638356962,16.4156132292979,12.1402256851867,16.1960927721973,14.5024332577696,14.1737401375216,13.5536553358864,7.37384916220821,12.6060036762104,10.1254341007058,9.04747703635634,13.5976420954677,13.769399644533,12.6930903300177,30.9862638676438,30.7094618871572,32.9509240207118,22.7223834483936,22.085575359138,17.5697434933487,15.5104846367615,17.6836910484888,18.2694912747563,18.9661275628518,17.0020494703456,15.7818163272108,18.9738133414331,44.6636629826312,18.7360912474915,17.2723635557238,21.1753047159649,13.1976098378028,23.8941249011933,16.2663026223838,20.5580018736031,17.3516673375426,14.1744908582771,17.5238034328039,15.247269296925,14.1778154496227,11.0514187299264,17.3820216864699,15.8127912862498,24.7525303795648,18.7241783164583,26.2889197285713,20.9561067728062,15.2179294872431,21.6355085043574,17.8368817602071,15.4676079365994,14.6143175575008,24.4058576386259,8.68511490541663,11.2469483008031,26.5466867235783,16.3079070962865,31.9658502119226,24.1132134886336,24.4569940620141,9.61886760878507,37.826761610144,19.1375386493595,20.0195261924326,16.2971184085346,15.4462134743847,18.5904149700594,19.2173665493479,14.9581018394593,13.2953879707475,15.0637971446822,15.2747298882418,23.8833675153757,17.2821547057821,1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| ||
|short_description=p1@Gm9531,p1@LOC100504508,p2@Set | |short_description=p1@Gm9531,p1@LOC100504508,p2@Set | ||
}} | }} |
Latest revision as of 12:47, 26 September 2015
Short description: | p1@Gm9531, p1@LOC100504508, p2@Set |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm9531_5end, CAGE_peak_1_at_LOC100504508_5end, CAGE_peak_2_at_Set_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000067996_5end |
EntrezGene: | 100504508,56086,671392 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.93e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.93e-09 | 23 |
neuron | 2.92e-07 | 33 |
neuronal stem cell | 2.92e-07 | 33 |
neuroblast | 2.92e-07 | 33 |
electrically signaling cell | 2.92e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.38e-14 | 54 |
gray matter | 2.03e-14 | 34 |
nervous system | 9.07e-14 | 75 |
neural tube | 1.24e-13 | 52 |
neural rod | 1.24e-13 | 52 |
future spinal cord | 1.24e-13 | 52 |
neural keel | 1.24e-13 | 52 |
brain grey matter | 6.18e-13 | 29 |
regional part of telencephalon | 6.18e-13 | 29 |
telencephalon | 6.18e-13 | 29 |
central nervous system | 6.90e-13 | 73 |
ecto-epithelium | 1.11e-12 | 73 |
neurectoderm | 1.72e-12 | 64 |
neural plate | 1.72e-12 | 64 |
presumptive neural plate | 1.72e-12 | 64 |
ectoderm-derived structure | 1.73e-12 | 95 |
ectoderm | 1.73e-12 | 95 |
presumptive ectoderm | 1.73e-12 | 95 |
anterior neural tube | 1.82e-12 | 40 |
brain | 4.09e-12 | 47 |
future brain | 4.09e-12 | 47 |
regional part of forebrain | 5.00e-12 | 39 |
forebrain | 5.00e-12 | 39 |
future forebrain | 5.00e-12 | 39 |
regional part of brain | 1.40e-11 | 46 |
pre-chordal neural plate | 1.98e-11 | 49 |
cerebral cortex | 1.31e-09 | 21 |
cerebral hemisphere | 1.31e-09 | 21 |
pallium | 1.31e-09 | 21 |
regional part of cerebral cortex | 1.13e-07 | 17 |
occipital lobe | 1.84e-07 | 10 |
visual cortex | 1.84e-07 | 10 |
neocortex | 1.84e-07 | 10 |
structure with developmental contribution from neural crest | 1.90e-07 | 92 |