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FFCP PHASE1:Mm9::chr9:27598861..27598921,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:27598861..27598921,+
|DHSsupport=NA
|short_description=p1@Opcml
|DPIdataset=NA
|description=CAGE_peak_1_at_Opcml_5end
|association_with_transcript=0bp_to_ENSMUST00000123779_5end
|EntrezGene=330908
|EntrezGene=330908
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000123779_5end
|cluster_id=chr9:27598861..27598921,+
|description=CAGE_peak_1_at_Opcml_5end
|id=chr9:27598861..27598921,+
|ontology_enrichment_celltype=CL:0000540!4.64e-14!33;CL:0000047!4.64e-14!33;CL:0000031!4.64e-14!33;CL:0000404!4.64e-14!33;CL:0000117!1.60e-12!23;CL:0000337!1.60e-12!23;CL:0000393!3.43e-11!39;CL:0000211!3.43e-11!39;CL:0000221!1.52e-09!44;CL:0000133!1.52e-09!44;CL:0002319!2.13e-09!43;CL:0000055!3.38e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000540,3.06e-16,33;CL:0000047,3.06e-16,33;CL:0000031,3.06e-16,33;CL:0000404,3.06e-16,33;CL:0000117,1.96e-14,23;CL:0000337,1.96e-14,23;CL:0000393,3.83e-13,39;CL:0000211,3.83e-13,39;CL:0000221,4.74e-11,44;CL:0000133,4.74e-11,44;CL:0002319,7.02e-11,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.37e-24!73;UBERON:0005743!4.37e-24!73;UBERON:0000073!1.39e-23!75;UBERON:0001016!1.39e-23!75;UBERON:0004121!1.64e-21!102;UBERON:0000924!1.64e-21!102;UBERON:0006601!1.64e-21!102;UBERON:0001049!2.61e-18!52;UBERON:0005068!2.61e-18!52;UBERON:0006241!2.61e-18!52;UBERON:0007135!2.61e-18!52;UBERON:0000955!2.50e-17!50;UBERON:0006238!2.50e-17!50;UBERON:0002346!6.51e-17!71;UBERON:0003075!6.51e-17!71;UBERON:0007284!6.51e-17!71;UBERON:0002020!6.70e-17!34;UBERON:0002616!1.04e-16!49;UBERON:0000033!6.14e-16!63;UBERON:0003080!3.10e-15!40;UBERON:0002780!1.33e-14!39;UBERON:0001890!1.33e-14!39;UBERON:0006240!1.33e-14!39;UBERON:0002791!4.74e-14!29;UBERON:0003528!4.74e-14!29;UBERON:0001893!4.74e-14!29;UBERON:0003056!5.31e-14!49;UBERON:0000956!8.64e-10!21;UBERON:0001869!8.64e-10!21;UBERON:0000203!8.64e-10!21;UBERON:0000468!2.49e-08!333;UBERON:0002021!3.20e-08!10;UBERON:0000411!3.20e-08!10;UBERON:0001950!3.20e-08!10;UBERON:0002619!1.27e-07!17;UBERON:0000153!2.14e-07!94;UBERON:0007811!4.79e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.50e-28,73;UBERON:0001016,5.54e-27,75;UBERON:0004121,6.76e-25,95;UBERON:0000924,6.76e-25,95;UBERON:0006601,6.76e-25,95;UBERON:0000073,2.24e-23,54;UBERON:0001049,7.71e-22,52;UBERON:0005068,7.71e-22,52;UBERON:0006241,7.71e-22,52;UBERON:0007135,7.71e-22,52;UBERON:0010371,1.13e-21,73;UBERON:0002346,7.92e-21,64;UBERON:0003075,7.92e-21,64;UBERON:0007284,7.92e-21,64;UBERON:0002020,2.77e-20,34;UBERON:0000955,1.59e-18,47;UBERON:0006238,1.59e-18,47;UBERON:0002616,8.28e-18,46;UBERON:0003080,1.30e-17,40;UBERON:0003528,6.46e-17,29;UBERON:0002791,6.46e-17,29;UBERON:0001893,6.46e-17,29;UBERON:0002780,7.17e-17,39;UBERON:0001890,7.17e-17,39;UBERON:0006240,7.17e-17,39;UBERON:0003056,1.39e-15,49;UBERON:0000956,7.03e-12,21;UBERON:0001869,7.03e-12,21;UBERON:0000203,7.03e-12,21;UBERON:0010314,4.87e-11,92;UBERON:0002021,2.19e-09,10;UBERON:0000411,2.19e-09,10;UBERON:0001950,2.19e-09,10;UBERON:0002619,2.62e-09,17
|phase1_expression=15.8547358633746,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0.157731082679119,0,0,21.3458658279185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27331726736501,2.12891555560981,0.917733760808408,0,0,0,0,0.419959264876088,0,0,0,0,0,0,0,25.4918740683093,35.4423956112262,27.8885817542719,0,0,0,0,0,5.39280198933128,6.91592949578798,46.245567089581,41.446823067829,38.6997928886543,47.989365379839,47.0449992226937,13.229006315215,6.70918297127655,11.0306254393203,92.4973400394865,87.2104519121832,97.3865420844584,30.0700736024842,27.8122436551325,34.9011958273029,52.765586811261,65.2804627636749,68.9120097473414,104.003890672205,78.873911162703,27.9599168737951,0.454357159999104,0.755715601067855,0,0,0,0,0,0,1.82577746171277,0.170430322578058,0.259786004602869,0,3.09855523508697,0,0,0,0,0,0,2.05530983494308,0.517875767294343,0.29688427812965,1.21439728736295,0.608930956624282,0.922461989024234,1.20578112442098,2.58695155698551,0.125666591329675,0,4.19338135067744,0,0.485300549842228,0.220841518460394,0,1.86391761218122,4.09893115816166,6.91174132484402,0.255457055208591,0,0,0,118.933767687429,116.66265371875,29.654427098636,185.818198285544,176.955096472589,84.1541580466218,109.675093833804,3.25885964321012,0.373220911830279,0.252722758433675,1.05220927943237,0.130120442962704,0.229902104433473,0.360124259610698,1.35634336052144,2.04109497453984,2.69038812598185,2.43624483855295,5.95017752699736,0,1.70195472151037,2.99116911078713,3.5071317188412,5.83899223373756,1.74126083261083,3.49829631893504,0,0,0,0,0.828503090142008,1.64168241986767,0.720248245844059,0.946978942340841,0.983821158737019,0.617068451549513,0,0.268273401399619,0.350296027101508,0.329119699826961,0.492502392237286,0.243206428637567,0.584799949701329,0.219550115291051,0,232.160103214796,168.351945852509,0.330418782983798,0,2.13288250535234,1.85789337488351,2.19074684247559,3.63030344322017,2.00140239460383,2.09248188723815,1.42358718463353,0.988193728344065,2.26201687920243,1.98956472041151,1.55971269695296,0.898819408654221,0.216138049874694,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.280543279561274,0,0.295220295959204,0,0,0.296452627087149,0.500535317148282,0.589676985339609,0.224862112384854,0.405720242777006,0,0,0,0,0,1.43768206527355,0,0,0.252578877947112,0,0.482443521363367,0.554259570499814,0.947457058852424,1.46668478797823,0.678980343100753,0.704070744865506,0.502518772325447,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0.318909537314974,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0.983528546038072,1.93155722413313,75.7798784742378,69.8581652089531,9.18035694109382,3.53459298086122,4.41711507182759,5.46614242015294,9.47862950024315,9.31978312014953,12.2539270745317,16.7015153165411,2.02405350837447,1.46127928955656,2.76701444562566,97.6816801922293,0.99358059645788,0.178065603667255,0.651547837414304,2.47455184458803,1.32745138339963,8.25454162926937,3.62788268357701,0.943025398779491,0.590603785761546,2.15204603560749,1.03371317267288,1.09060118843252,2.49548164869305,1.8962205476149,0,2.06271086496374,1.02131881726136,0.18006109403131,0.517434735131018,2.14337035031592,6.56158864476412,4.45922044005176,6.58196082408484,2.13125464380219,0,0,0.441056796109924,16.3237390412065,3.55221738730992,2.23157822234177,1.55184047204077,1.64140899745061,0.874442509889552,58.4089701333105,0,0.412773735926445,0.925972636848558,0,0.136694227721025,0,0,0,0,1.90934123603023,0.474503990371703,2.64315307264903,1.94409613479242,2.50905955217362,1.31017538247707,1.48350781023303,2.14898984885873,1.04702376793612,0.90730481304255,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0.506868376472335,0.58678619322877,0.5208175393758,0,0,0.288030006257865,0.316011120628178,0.405450430580328,1.43795340030758,0.25984164595559,0,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.116876902181569,1.13365191807606,0,0,0.167884616364078,2.51146472241848,0.563047426353546,0.73260649706906,0.857473516316263,0,268.257125243107,235.226195855167,248.063757319259,174.77468644353,158.254062067018,171.474414707462,172.805760059342,162.565954363944,193.038666227271,167.75434100759,0.207574695168353,3.99024873401031,6.65861062441123,12.1553358534147,5.44994222832754,4.96377472815038,23.7803998747728,18.3371200942616,25.0316983481616,24.0062351175608,27.3757643881459,21.5034029180127,14.7953581802414,17.6709420637439,15.6224475559268,18.5754539600399,17.3826488917283,15.046919196169,20.6042950401653,17.2222736557245,16.8005933668854,17.3926290036151,15.9752247264705,17.2962235792471,18.5395479418201,17.515223833577,13.5366699925852,21.3086466264653,19.69159650765,14.0285567914435,13.64302708428,13.98763649733,18.0061658994663,14.8739367538527,14.4679958235856,27.4791635731741,19.6502551094143,16.9748132698156,7.26895661861605,5.7353768971074,4.40548887678801
|phase1_expression=15.8547358633746,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0.157731082679119,0,0,21.3458658279185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27331726736501,2.12891555560981,0.917733760808408,0,0,0,0,0.419959264876088,0,0,0,0,0,0,0,25.4918740683093,35.4423956112262,27.8885817542719,0,0,0,0,0,5.39280198933128,6.91592949578798,46.245567089581,41.446823067829,38.6997928886543,47.989365379839,47.0449992226937,13.229006315215,6.70918297127655,11.0306254393203,92.4973400394865,87.2104519121832,97.3865420844584,30.0700736024842,27.8122436551325,34.9011958273029,52.765586811261,65.2804627636749,68.9120097473414,104.003890672205,78.873911162703,27.9599168737951,0.454357159999104,0.755715601067855,0,0,0,0,0,0,1.82577746171277,0.170430322578058,0.259786004602869,0,3.09855523508697,0,0,0,0,0,0,2.05530983494308,0.517875767294343,0.29688427812965,1.21439728736295,0.608930956624282,0.922461989024234,1.20578112442098,2.58695155698551,0.125666591329675,0,4.19338135067744,0,0.485300549842228,0.220841518460394,0,1.86391761218122,4.09893115816166,6.91174132484402,0.255457055208591,0,0,0,118.933767687429,116.66265371875,29.654427098636,185.818198285544,176.955096472589,84.1541580466218,109.675093833804,3.25885964321012,0.373220911830279,0.252722758433675,1.05220927943237,0.130120442962704,0.229902104433473,0.360124259610698,1.35634336052144,2.04109497453984,2.69038812598185,2.43624483855295,5.95017752699736,0,1.70195472151037,2.99116911078713,3.5071317188412,5.83899223373756,1.74126083261083,3.49829631893504,0,0,0,0,0.828503090142008,1.64168241986767,0.720248245844059,0.946978942340841,0.983821158737019,0.617068451549513,0,0.268273401399619,0.350296027101508,0.329119699826961,0.492502392237286,0.243206428637567,0.584799949701329,0.219550115291051,0,232.160103214796,168.351945852509,0.330418782983798,0,2.13288250535234,1.85789337488351,2.19074684247559,3.63030344322017,2.00140239460383,2.09248188723815,1.42358718463353,0.988193728344065,2.26201687920243,1.98956472041151,1.55971269695296,0.898819408654221,0.216138049874694,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.280543279561274,0,0.295220295959204,0,0,0.296452627087149,0.500535317148282,0.589676985339609,0.224862112384854,0.405720242777006,0,0,0,0,0,1.43768206527355,0,0,0.252578877947112,0,0.482443521363367,0.554259570499814,0.947457058852424,1.46668478797823,0.678980343100753,0.704070744865506,0.502518772325447,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0.318909537314974,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0.983528546038072,1.93155722413313,75.7798784742378,69.8581652089531,9.18035694109382,3.53459298086122,4.41711507182759,5.46614242015294,9.47862950024315,9.31978312014953,12.2539270745317,16.7015153165411,2.02405350837447,1.46127928955656,2.76701444562566,97.6816801922293,0.99358059645788,0.178065603667255,0.651547837414304,2.47455184458803,1.32745138339963,8.25454162926937,3.62788268357701,0.943025398779491,0.590603785761546,2.15204603560749,1.03371317267288,1.09060118843252,2.49548164869305,1.8962205476149,0,2.06271086496374,1.02131881726136,0.18006109403131,0.517434735131018,2.14337035031592,6.56158864476412,4.45922044005176,6.58196082408484,2.13125464380219,0,0,0.441056796109924,16.3237390412065,3.55221738730992,2.23157822234177,1.55184047204077,1.64140899745061,0.874442509889552,58.4089701333105,0,0.412773735926445,0.925972636848558,0,0.136694227721025,0,0,0,0,1.90934123603023,0.474503990371703,2.64315307264903,1.94409613479242,2.50905955217362,1.31017538247707,1.48350781023303,2.14898984885873,1.04702376793612,0.90730481304255,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0.506868376472335,0.58678619322877,0.5208175393758,0,0,0.288030006257865,0.316011120628178,0.405450430580328,1.43795340030758,0.25984164595559,0,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.116876902181569,1.13365191807606,0,0,0.167884616364078,2.51146472241848,0.563047426353546,0.73260649706906,0.857473516316263,0,268.257125243107,235.226195855167,248.063757319259,174.77468644353,158.254062067018,171.474414707462,172.805760059342,162.565954363944,193.038666227271,167.75434100759,0.207574695168353,3.99024873401031,6.65861062441123,12.1553358534147,5.44994222832754,4.96377472815038,23.7803998747728,18.3371200942616,25.0316983481616,24.0062351175608,27.3757643881459,21.5034029180127,14.7953581802414,17.6709420637439,15.6224475559268,18.5754539600399,17.3826488917283,15.046919196169,20.6042950401653,17.2222736557245,16.8005933668854,17.3926290036151,15.9752247264705,17.2962235792471,18.5395479418201,17.515223833577,13.5366699925852,21.3086466264653,19.69159650765,14.0285567914435,13.64302708428,13.98763649733,18.0061658994663,14.8739367538527,14.4679958235856,27.4791635731741,19.6502551094143,16.9748132698156,7.26895661861605,5.7353768971074,4.40548887678801
|short_description=p1@Opcml
}}
}}

Latest revision as of 12:36, 26 September 2015

Short description:p1@Opcml
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Opcml_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000123779_5end
EntrezGene:Opcml
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Opcml

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C325.49
Mouse Granule cells, donor2.CNhs12357.11731-123E335.44
Mouse Granule cells, donor3.CNhs12108.11636-122C727.89
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D546.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F541.45
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D938.70
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F147.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D547.04
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D213.23
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.71
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D392.50
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F387.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D797.39
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D430.07
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F427.81
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D834.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E452.77
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E565.28
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I668.91
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6104.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F678.87
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E127.96
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H14.19
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I26.91
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4118.93
corpus striatum, adult.CNhs10487.19-21D8116.66
corpus striatum, neonate N00.CNhs11226.630-43F129.65
cortex, adult.CNhs10473.12-14D5185.82
cortex, neonate N30.CNhs11107.1392-42F2176.96
diencephalon, adult.CNhs10482.20-12F284.15
diencephalon, neonate N30.CNhs11201.1388-42B2109.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.26
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A25.95
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A83.51
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B53.50
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8232.16
hippocampus, neonate N00.CNhs11228.627-43G1168.35
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H43.63
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C275.78
medulla oblongata, neonate N30.CNhs11200.1396-42A369.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.18
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.48
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.32
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.25
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D916.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I997.68
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F48.25
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B96.56
pituitary gland, embryo E16.CNhs11036.449-43F64.46
pituitary gland, embryo E17.CNhs11039.1265-44F56.58
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C316.32
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H32.23
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C958.41
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D41.94
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A92.15
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1268.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2235.23
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3248.06
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7174.77
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4158.25
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5171.47
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6172.81
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7162.57
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8193.04
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9167.75
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H26.66
whole body, embryo E14.5.CNhs10578.420-27D212.16
whole body, embryo E14.CNhs10519.395-14B15.45
whole body, embryo E16.CNhs10514.453-14F24.96
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G523.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.34
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G525.03
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G524.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G527.38
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G521.50
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.80
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.67
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G517.38
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.22
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G517.39
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.98
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.30
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.54
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G521.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G519.69
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.03
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.01
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G514.87
whole body, embryo E17.5.CNhs10513.490-9F914.47
whole body, embryo E17.CNhs10517.475-3I527.48
whole body, embryo E18.CNhs10516.493-3B319.65
whole body, neonate N00.CNhs10525.657-19C216.97
whole body, neonate N01.CNhs10576.659-23C67.27
whole body, neonate N06.CNhs10515.692-21D15.74
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.06e-1633
neuronal stem cell3.06e-1633
neuroblast3.06e-1633
electrically signaling cell3.06e-1633
CNS neuron (sensu Vertebrata)1.96e-1423
neuroblast (sensu Vertebrata)1.96e-1423
electrically responsive cell3.83e-1339
electrically active cell3.83e-1339
ectodermal cell4.74e-1144
neurectodermal cell4.74e-1144
neural cell7.02e-1143

Uber anatomy
Ontology termp-valuen
central nervous system1.50e-2873
nervous system5.54e-2775
ectoderm-derived structure6.76e-2595
ectoderm6.76e-2595
presumptive ectoderm6.76e-2595
regional part of nervous system2.24e-2354
neural tube7.71e-2252
neural rod7.71e-2252
future spinal cord7.71e-2252
neural keel7.71e-2252
ecto-epithelium1.13e-2173
neurectoderm7.92e-2164
neural plate7.92e-2164
presumptive neural plate7.92e-2164
gray matter2.77e-2034
brain1.59e-1847
future brain1.59e-1847
regional part of brain8.28e-1846
anterior neural tube1.30e-1740
brain grey matter6.46e-1729
regional part of telencephalon6.46e-1729
telencephalon6.46e-1729
regional part of forebrain7.17e-1739
forebrain7.17e-1739
future forebrain7.17e-1739
pre-chordal neural plate1.39e-1549
cerebral cortex7.03e-1221
cerebral hemisphere7.03e-1221
pallium7.03e-1221
structure with developmental contribution from neural crest4.87e-1192
occipital lobe2.19e-0910
visual cortex2.19e-0910
neocortex2.19e-0910
regional part of cerebral cortex2.62e-0917
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