FFCP PHASE1:Mm9::chr2:29643828..29643840,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr2:29643828..29643840,+ to FFCP PHASE1:Mm9::chr2:29643828..29643840,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=227683 | |EntrezGene=227683 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=45bp_to_uc008jad.1,uc012bti.1_5end | |||
|cluster_id=chr2:29643828..29643840,+ | |||
|description=CAGE_peak_4_at_Coq4_5end | |||
|id=chr2:29643828..29643840,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.66e-08,6;CL:0000677,1.66e-08,6;CL:0000584,1.66e-08,6;CL:0000075,2.68e-07,7;CL:0000878,2.79e-07,2;CL:0000129,2.79e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!9.21e-10!102;UBERON:0000924!9.21e-10!102;UBERON:0006601!9.21e-10!102;UBERON:0001017!1.35e-09!73;UBERON:0005743!1.35e-09!73;UBERON:0000073!2.28e-09!75;UBERON:0001016!2.28e-09!75;UBERON:0001049!6.03e-09!52;UBERON:0005068!6.03e-09!52;UBERON:0006241!6.03e-09!52;UBERON:0007135!6.03e-09!52;UBERON:0000033!7.80e-09!63;UBERON:0000955!6.93e-08!50;UBERON:0006238!6.93e-08!50;UBERON:0002616!9.03e-08!49;UBERON:0002020!9.49e-08!34;UBERON:0003080!2.49e-07!40;UBERON:0002780!4.32e-07!39;UBERON:0001890!4.32e-07!39;UBERON:0006240!4.32e-07!39;UBERON:0003056!5.22e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.92e-11,10;UBERON:0000411,3.92e-11,10;UBERON:0001950,3.92e-11,10;UBERON:0000344,2.18e-09,15;UBERON:0001962,7.00e-07,2;UBERON:0001961,7.00e-07,2;UBERON:0001744,7.00e-07,2 | |||
|phase1_expression=0.640595388419176,1.04692622291808,2.27499619694768,4.53696316960245,2.00358291978539,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,2.97651515528744,0.198581902401771,0,1.11994695955385,1.60586496747019,0,0,0.646413698057667,0.570070258369122,0.504060259519861,0.443461021310609,0,0,0,0,0.332469290716985,0,1.25559489221072,0,0.523523743973798,0.588231488031014,0,0.485510353031154,0.125896817975577,0,0,0,0.436050312760893,0.219686182734472,0.194429899074283,0.699932108126813,4.31257693094915,0,0,0,0,0,0,0.202316460859598,1.5869729378161,0,0,0,0,0,0,1.19840044207362,4.61061966385865,0.311068836925433,0.135005938331691,0.420649922702764,0.285650984403804,1.10434270475807,0.61245399607477,0.191690942036473,0,1.10115880999389,0.383062014255563,0.307213066512487,0.395658863190582,0.457438218012048,0,0.558365998002762,0.56276261003168,0.30559649555362,0.589257170947335,0.996601765593721,0.745597783301202,0.151452386666368,0.151143120213571,0,0,0,0,0,0.448026887097336,0.983110940922263,0.170430322578058,0.259786004602869,0,0.422530259330042,0,0,0,0.216491041011214,0,0.505524445014783,0.91347103775248,0,0.445326417194474,0.173485326766136,0,0,0.150722640552623,0,0.125666591329675,0,0.289198713839823,0,0,0,0,1.86391761218122,0,0.209446706813455,0.510914110417183,0,0,0,0.449371918214468,0.915001205637253,0.879580464790051,0.521472960576829,1.53429274398198,0.62336413367868,0.648965052271031,0,0.497627882440372,0.252722758433675,0.841767423545896,0.130120442962704,0,0.360124259610698,0.150704817835715,0.340182495756639,0.12811372028485,0.187403449119458,0.258703370739016,0,0.567318240503458,0.351902248327898,0.219195732427575,0,0,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0.630869845692382,0.92614151141356,5.61711931072457,1.58670339998127,0,0,0.257734922644187,0.403367049246685,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0.58489226135736,0,1.08069024937347,0.199141273254367,0.948339504765408,0.228497025219458,0,0.203651327845314,0,0.350679099451593,0.252946148497029,0.147610147979602,0,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0.37898282354097,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,0.476087281772027,0.585400943573396,0.157635144106191,0,0.318909537314974,0.327726629431476,1.03610989119537,0.723245292907558,0,0,0.491764273019036,0.275936746304732,0.481651769963376,0.468846746368813,0.163934945376675,0,0,0,0,0.477937595905104,0.222798674082394,0.283076530788832,0,0,0,0.321321316421807,0.709700426041343,0.178065603667255,0.488660878060728,0.329940245945071,0,0.242780636154981,0,0.377210159511796,0.885905678642318,0.307435147943927,0.258428293168221,0,0.712994756769443,0,0,0,0,0,0.388076051348264,0.214337035031592,0.886701168211368,0.713475270408282,0.822745103010605,0.304464949114599,0.469343416127421,0,0,0.32977250588296,0.161464426695906,0.301564624640779,0.477489376012546,0.656563598980245,0.582961673259701,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0.316335993581135,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.518459893167171,0.621339313086926,20.2929457926309,0,0,0.388902376688095,0.129159823477731,0.675824501963113,0,0.2604087696879,0.314578033277133,4.83168241652012,7.77681016896237,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.453460767230423,0,0.0897138566094757,0.335769232728157,0.386379188064381,0.187682475451182,0.36630324853453,0,0,3.3885110557024,3.22227665555024,2.29158205375759,3.26521046453006,0,3.0215755895588,1.35004500046361,0.45032120322422,0,0.51776031175182,0.207574695168353,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0,0,0.37456602987953,0.192075457214608,0.17230640686684,0,0.115884325944855,0,0,0.294397840268795,0,0.177475806159338,0,0,0.188218760830661,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.394017929502254,0,0.309873682371932,0.192906610981141,0.999242311751784,0.467863216890817,0.429742108096597,0,0.441182838239031,0 | |phase1_expression=0.640595388419176,1.04692622291808,2.27499619694768,4.53696316960245,2.00358291978539,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,2.97651515528744,0.198581902401771,0,1.11994695955385,1.60586496747019,0,0,0.646413698057667,0.570070258369122,0.504060259519861,0.443461021310609,0,0,0,0,0.332469290716985,0,1.25559489221072,0,0.523523743973798,0.588231488031014,0,0.485510353031154,0.125896817975577,0,0,0,0.436050312760893,0.219686182734472,0.194429899074283,0.699932108126813,4.31257693094915,0,0,0,0,0,0,0.202316460859598,1.5869729378161,0,0,0,0,0,0,1.19840044207362,4.61061966385865,0.311068836925433,0.135005938331691,0.420649922702764,0.285650984403804,1.10434270475807,0.61245399607477,0.191690942036473,0,1.10115880999389,0.383062014255563,0.307213066512487,0.395658863190582,0.457438218012048,0,0.558365998002762,0.56276261003168,0.30559649555362,0.589257170947335,0.996601765593721,0.745597783301202,0.151452386666368,0.151143120213571,0,0,0,0,0,0.448026887097336,0.983110940922263,0.170430322578058,0.259786004602869,0,0.422530259330042,0,0,0,0.216491041011214,0,0.505524445014783,0.91347103775248,0,0.445326417194474,0.173485326766136,0,0,0.150722640552623,0,0.125666591329675,0,0.289198713839823,0,0,0,0,1.86391761218122,0,0.209446706813455,0.510914110417183,0,0,0,0.449371918214468,0.915001205637253,0.879580464790051,0.521472960576829,1.53429274398198,0.62336413367868,0.648965052271031,0,0.497627882440372,0.252722758433675,0.841767423545896,0.130120442962704,0,0.360124259610698,0.150704817835715,0.340182495756639,0.12811372028485,0.187403449119458,0.258703370739016,0,0.567318240503458,0.351902248327898,0.219195732427575,0,0,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0.630869845692382,0.92614151141356,5.61711931072457,1.58670339998127,0,0,0.257734922644187,0.403367049246685,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0.58489226135736,0,1.08069024937347,0.199141273254367,0.948339504765408,0.228497025219458,0,0.203651327845314,0,0.350679099451593,0.252946148497029,0.147610147979602,0,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0.37898282354097,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,0.476087281772027,0.585400943573396,0.157635144106191,0,0.318909537314974,0.327726629431476,1.03610989119537,0.723245292907558,0,0,0.491764273019036,0.275936746304732,0.481651769963376,0.468846746368813,0.163934945376675,0,0,0,0,0.477937595905104,0.222798674082394,0.283076530788832,0,0,0,0.321321316421807,0.709700426041343,0.178065603667255,0.488660878060728,0.329940245945071,0,0.242780636154981,0,0.377210159511796,0.885905678642318,0.307435147943927,0.258428293168221,0,0.712994756769443,0,0,0,0,0,0.388076051348264,0.214337035031592,0.886701168211368,0.713475270408282,0.822745103010605,0.304464949114599,0.469343416127421,0,0,0.32977250588296,0.161464426695906,0.301564624640779,0.477489376012546,0.656563598980245,0.582961673259701,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0.316335993581135,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.518459893167171,0.621339313086926,20.2929457926309,0,0,0.388902376688095,0.129159823477731,0.675824501963113,0,0.2604087696879,0.314578033277133,4.83168241652012,7.77681016896237,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.453460767230423,0,0.0897138566094757,0.335769232728157,0.386379188064381,0.187682475451182,0.36630324853453,0,0,3.3885110557024,3.22227665555024,2.29158205375759,3.26521046453006,0,3.0215755895588,1.35004500046361,0.45032120322422,0,0.51776031175182,0.207574695168353,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0,0,0.37456602987953,0.192075457214608,0.17230640686684,0,0.115884325944855,0,0,0.294397840268795,0,0.177475806159338,0,0,0.188218760830661,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.394017929502254,0,0.309873682371932,0.192906610981141,0.999242311751784,0.467863216890817,0.429742108096597,0,0.441182838239031,0 | ||
|short_description=p4@Coq4 | |||
}} | }} |
Latest revision as of 12:34, 26 September 2015
Short description: | p4@Coq4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Coq4_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 45bp_to_uc008jad.1, uc012bti.1_5end |
EntrezGene: | Coq4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.66e-08 | 6 |
gut absorptive cell | 1.66e-08 | 6 |
enterocyte | 1.66e-08 | 6 |
columnar/cuboidal epithelial cell | 2.68e-07 | 7 |
central nervous system macrophage | 2.79e-07 | 2 |
microglial cell | 2.79e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.92e-11 | 10 |
visual cortex | 3.92e-11 | 10 |
neocortex | 3.92e-11 | 10 |
mucosa | 2.18e-09 | 15 |
gut-associated lymphoid tissue | 7.00e-07 | 2 |
mucosa-associated lymphoid tissue | 7.00e-07 | 2 |
lymphoid tissue | 7.00e-07 | 2 |