FFCP PHASE1:Mm9::chr4:134052881..134052903,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71904 | |EntrezGene=71904 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=D3Z5A3,D3YZW6,D3Z7K5,Q80ZE4 | |UniProt=D3Z5A3,D3YZW6,D3Z7K5,Q80ZE4 | ||
|association_with_transcript=0bp_to_ENSMUST00000125330,ENSMUST00000134506,ENSMUST00000136171,NM_027995,uc008vfd.1,uc008vfe.1,uc008vff.1_5end | |association_with_transcript=0bp_to_ENSMUST00000125330,ENSMUST00000134506,ENSMUST00000136171,NM_027995,uc008vfd.1,uc008vfe.1,uc008vff.1_5end | ||
|cluster_id=chr4:134052881..134052903,+ | |||
|description=CAGE_peak_2_at_Paqr7_5end | |description=CAGE_peak_2_at_Paqr7_5end | ||
|id=chr4:134052881..134052903,+ | |id=chr4:134052881..134052903,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!8.41e-08!122;UBERON:0001049!1.76e-07!52;UBERON:0005068!1.76e-07!52;UBERON:0006241!1.76e-07!52;UBERON:0007135!1.76e-07!52;UBERON:0000955!2.16e-07!50;UBERON:0006238!2.16e-07!50;UBERON:0002616!4.53e-07!49;UBERON:0000025!6.52e-07!114;UBERON:0002346!9.62e-07!71;UBERON:0003075!9.62e-07!71;UBERON:0007284!9.62e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.88e-08,54;UBERON:0004111,1.20e-07,122;UBERON:0001049,1.86e-07,52;UBERON:0005068,1.86e-07,52;UBERON:0006241,1.86e-07,52;UBERON:0007135,1.86e-07,52;UBERON:0000025,9.22e-07,114 | |||
|phase1_expression=3.52327463630547,0.697950815278722,1.81999695755814,2.11724947914781,1.00179145989269,0.33575854382378,0.467225281191051,4.51931632045517,0.563154888606667,0.234064526321993,0.68487187290202,0.717949430958028,10.2720437958723,6.29426897416781,0.333109761815663,1.01237633694913,0,2.36596624018678,1.50825876966313,0.42438965179803,2.29616883407888,4.36880185283895,2.61199789138935,2.71987118748791,1.83527424853736,2.8711598205751,0.86152399231815,0.861884930743556,1.52018735565099,0,1.33038306393183,1.27006134691926,0.61506478758457,0,1.1554064790051,1.32987716286794,1.02084678131185,11.7188856606334,9.37602413428561,10.470474879476,13.5293242247133,13.6609096991689,16.0218416500281,0.251793635951155,0.405507724878058,0,3.12956537739216,4.36050312760893,5.05278220289285,1.55543919259427,3.3596741190087,5.75010257459886,1.00669563634642,5.07753499407941,9.41062637598899,5.40244815675489,4.58453503902011,3.6097046459421,1.01158230429799,2.11596391708813,3.80298842103708,2.03306719241479,1.77858959222228,7.19919773825119,5.93319817540185,12.0781619540837,7.19040265244171,11.5265491596466,1.24427534770173,2.02508907497536,0.630974884054146,8.56952953211411,3.09215957332259,0.979926393719632,1.24599112323707,0,9.91042928994498,7.15049093277051,7.37311359629969,2.76961204233407,3.65950574409639,1.56274011167028,11.4465029590566,6.75315132038016,6.26472815884921,5.00868595305235,4.8406371471695,3.35519002485541,0.454357159999104,1.66257432234928,2.31891590961342,0.860423876981386,4.75979933595425,4.31762553310254,5.84798775702902,2.68816132258401,1.26399978118577,4.4311883870295,2.07828803682295,3.88673531961374,2.25349471642689,0,0,0,4.5463118612355,3.29367825117628,1.51657333504435,1.7127581957859,1.29468941823586,7.57054909230606,2.08182392119363,4.56698217468212,4.38169444786511,6.48107354376277,3.76283862834255,6.91166252313215,3.21353458054686,2.74738778147832,2.65383165584962,1.61766849947409,0.441683036920787,1.45462575940567,3.72783522436244,7.02673912827713,8.16842156572475,4.34276993854605,5.15205035375457,3.59941638596045,5.08280908292259,9.13722900369418,5.94750783664214,3.39266750704734,9.56033761057521,5.8814555185976,9.3504620051802,6.16516799657479,1.12023300235348,2.11491850037158,2.27450482590307,3.78795340595653,1.56144531555244,3.21862946206862,0.720248519221397,1.65775299619287,1.42876648217788,1.0249097622788,2.34254311399322,3.62184719034622,0.431135985865684,0,1.23165786914764,0.876782929710299,1.39023624612799,1.39300866608867,2.67516777330327,0.796137067273973,7.02213187313235,4.37491442095016,4.54661599032948,1.86413195281952,1.87620847984877,2.34080679899319,1.42046841351126,1.57411385397923,2.00547246753592,1.16266972375204,1.60964040839772,1.86824547787471,0.987359099480883,1.97000956894914,3.16168357228837,2.33919979880532,1.75640092232841,2.28150911892632,7.36014819974445,3.39585220851639,5.28670052774077,3.17340679996253,0.853153002140936,1.16118335930219,0.902072229254653,2.21851877085677,3.11329261382818,4.1849637744763,3.79623249235609,3.12928013975621,4.52403375840485,5.57078121715222,3.50935356814416,2.69645822596266,4.10662294761919,3.18626037206988,1.13800740571849,0.685491075658373,1.1270773567308,0.610953983535943,1.35766741017338,1.26244475802573,2.27651533647326,4.42830443938806,3.1399745568275,3.33172342588861,6.81841042300442,1.00107063429656,2.35870794135844,0.674586337154561,2.02860121388503,1.4470629585145,3.56476192493988,2.30156909960649,1.94562272130042,4.11842119782122,2.87536413054709,2.23284568601102,1.5601883655728,3.53610429125956,3.04975602987251,3.37710464954357,11.4546977903295,0.947457058852424,0.977789858652155,1.35796068620151,2.11221223459652,4.18765643604539,5.2369600994923,6.63454402716516,4.09851374676097,4.65075848262427,3.50800491046472,5.24362607090362,9.49767400262426,7.95569822198314,10.5553898757491,9.79030230873677,0,1.65562047782839,8.66973185934077,6.79827782234778,0.163934945376675,0.757412781613119,0.94652465824877,0.390438744296638,1.07711698866399,0.477937595905104,0.445597348164788,1.41538265394416,1.21443210502468,1.46127928955656,0.790575555893047,5.78378369559253,4.68402281187286,0.712262414669021,1.46598263418218,3.13443233647817,1.32745138339963,1.21390318077491,1.209294227859,0.188605079755898,2.36241514304618,1.53717573971964,1.29214146584111,1.09060118843252,2.13898427030833,0,1.05418608574999,0,1.70219802876894,0.720244376125241,1.29358683782755,1.50035924522115,1.24138163549592,1.24858172321449,3.29098041204242,3.95804433848979,1.17335854031855,1.48282449604674,2.20528398054962,2.14352128823924,2.58343082713449,1.74907482291652,2.26807453605959,1.47726809770555,2.91480836629851,11.3109434226411,2.9048049735635,2.06386867963222,0.370389054739423,1.31857919903284,0.956859594047176,2.74533807847827,4.9293744698218,6.57771825921193,4.56059913554598,4.77335309007557,0.316335993581135,0.609958401380546,2.05210147561422,1.46361807210128,2.18362563746178,2.96701562046606,2.14898984885873,3.14107130380836,2.07383957266869,3.72803587852155,1.12738587736838,0.448549638131936,2.15096037594227,1.16670713006429,2.19571699912143,2.02747350588934,0.821500670520278,1.3020438484395,2.20204623293993,0.724752362478018,1.72818003754719,6.00421129193539,1.21635129174099,1.74608627180206,1.29920822977795,1.61124026100733,0.993406773906324,2.64429988943931,1.18151621739662,1.51449674922221,1.295515713135,1.91569751759997,1.8516997340553,1.73181314952593,3.27255326108393,3.17422537061296,0,0,0.167884616364078,5.9888774149979,3.00291960721891,0.915758121336325,2.78678892802786,2.50786052017682,5.0827665835536,5.9842280745933,10.3121192419091,5.84300819968538,6.85082519770642,4.5323633843382,6.07520250208625,7.20513925158753,8.15656336171568,6.73088405277366,0,1.19707462020309,1.36586884603307,1.70174701947806,1.67690530102386,1.65459157605013,1.77797382241292,2.06035057238894,0.962757628775446,2.02157769411038,2.28131369901216,1.50901073108861,1.31098110457835,1.85672941974121,1.26358031702349,0.952587382566147,1.39061191133827,1.73618298417335,0.824171801606613,1.76638704161277,1.71434626192708,1.95223386775271,1.66905332963125,1.0174249164263,1.97629698872194,0.846146078916765,1.46342378298218,2.36762740294059,1.90125759384206,2.24456908663095,1.89816028998679,1.57607171800902,1.63692417267876,1.23949472948773,2.89359916471712,2.99772693525535,2.10538447600868,3.43793686477277,2.67803664896381,3.75005412503176,3.2461496986859 | |phase1_expression=3.52327463630547,0.697950815278722,1.81999695755814,2.11724947914781,1.00179145989269,0.33575854382378,0.467225281191051,4.51931632045517,0.563154888606667,0.234064526321993,0.68487187290202,0.717949430958028,10.2720437958723,6.29426897416781,0.333109761815663,1.01237633694913,0,2.36596624018678,1.50825876966313,0.42438965179803,2.29616883407888,4.36880185283895,2.61199789138935,2.71987118748791,1.83527424853736,2.8711598205751,0.86152399231815,0.861884930743556,1.52018735565099,0,1.33038306393183,1.27006134691926,0.61506478758457,0,1.1554064790051,1.32987716286794,1.02084678131185,11.7188856606334,9.37602413428561,10.470474879476,13.5293242247133,13.6609096991689,16.0218416500281,0.251793635951155,0.405507724878058,0,3.12956537739216,4.36050312760893,5.05278220289285,1.55543919259427,3.3596741190087,5.75010257459886,1.00669563634642,5.07753499407941,9.41062637598899,5.40244815675489,4.58453503902011,3.6097046459421,1.01158230429799,2.11596391708813,3.80298842103708,2.03306719241479,1.77858959222228,7.19919773825119,5.93319817540185,12.0781619540837,7.19040265244171,11.5265491596466,1.24427534770173,2.02508907497536,0.630974884054146,8.56952953211411,3.09215957332259,0.979926393719632,1.24599112323707,0,9.91042928994498,7.15049093277051,7.37311359629969,2.76961204233407,3.65950574409639,1.56274011167028,11.4465029590566,6.75315132038016,6.26472815884921,5.00868595305235,4.8406371471695,3.35519002485541,0.454357159999104,1.66257432234928,2.31891590961342,0.860423876981386,4.75979933595425,4.31762553310254,5.84798775702902,2.68816132258401,1.26399978118577,4.4311883870295,2.07828803682295,3.88673531961374,2.25349471642689,0,0,0,4.5463118612355,3.29367825117628,1.51657333504435,1.7127581957859,1.29468941823586,7.57054909230606,2.08182392119363,4.56698217468212,4.38169444786511,6.48107354376277,3.76283862834255,6.91166252313215,3.21353458054686,2.74738778147832,2.65383165584962,1.61766849947409,0.441683036920787,1.45462575940567,3.72783522436244,7.02673912827713,8.16842156572475,4.34276993854605,5.15205035375457,3.59941638596045,5.08280908292259,9.13722900369418,5.94750783664214,3.39266750704734,9.56033761057521,5.8814555185976,9.3504620051802,6.16516799657479,1.12023300235348,2.11491850037158,2.27450482590307,3.78795340595653,1.56144531555244,3.21862946206862,0.720248519221397,1.65775299619287,1.42876648217788,1.0249097622788,2.34254311399322,3.62184719034622,0.431135985865684,0,1.23165786914764,0.876782929710299,1.39023624612799,1.39300866608867,2.67516777330327,0.796137067273973,7.02213187313235,4.37491442095016,4.54661599032948,1.86413195281952,1.87620847984877,2.34080679899319,1.42046841351126,1.57411385397923,2.00547246753592,1.16266972375204,1.60964040839772,1.86824547787471,0.987359099480883,1.97000956894914,3.16168357228837,2.33919979880532,1.75640092232841,2.28150911892632,7.36014819974445,3.39585220851639,5.28670052774077,3.17340679996253,0.853153002140936,1.16118335930219,0.902072229254653,2.21851877085677,3.11329261382818,4.1849637744763,3.79623249235609,3.12928013975621,4.52403375840485,5.57078121715222,3.50935356814416,2.69645822596266,4.10662294761919,3.18626037206988,1.13800740571849,0.685491075658373,1.1270773567308,0.610953983535943,1.35766741017338,1.26244475802573,2.27651533647326,4.42830443938806,3.1399745568275,3.33172342588861,6.81841042300442,1.00107063429656,2.35870794135844,0.674586337154561,2.02860121388503,1.4470629585145,3.56476192493988,2.30156909960649,1.94562272130042,4.11842119782122,2.87536413054709,2.23284568601102,1.5601883655728,3.53610429125956,3.04975602987251,3.37710464954357,11.4546977903295,0.947457058852424,0.977789858652155,1.35796068620151,2.11221223459652,4.18765643604539,5.2369600994923,6.63454402716516,4.09851374676097,4.65075848262427,3.50800491046472,5.24362607090362,9.49767400262426,7.95569822198314,10.5553898757491,9.79030230873677,0,1.65562047782839,8.66973185934077,6.79827782234778,0.163934945376675,0.757412781613119,0.94652465824877,0.390438744296638,1.07711698866399,0.477937595905104,0.445597348164788,1.41538265394416,1.21443210502468,1.46127928955656,0.790575555893047,5.78378369559253,4.68402281187286,0.712262414669021,1.46598263418218,3.13443233647817,1.32745138339963,1.21390318077491,1.209294227859,0.188605079755898,2.36241514304618,1.53717573971964,1.29214146584111,1.09060118843252,2.13898427030833,0,1.05418608574999,0,1.70219802876894,0.720244376125241,1.29358683782755,1.50035924522115,1.24138163549592,1.24858172321449,3.29098041204242,3.95804433848979,1.17335854031855,1.48282449604674,2.20528398054962,2.14352128823924,2.58343082713449,1.74907482291652,2.26807453605959,1.47726809770555,2.91480836629851,11.3109434226411,2.9048049735635,2.06386867963222,0.370389054739423,1.31857919903284,0.956859594047176,2.74533807847827,4.9293744698218,6.57771825921193,4.56059913554598,4.77335309007557,0.316335993581135,0.609958401380546,2.05210147561422,1.46361807210128,2.18362563746178,2.96701562046606,2.14898984885873,3.14107130380836,2.07383957266869,3.72803587852155,1.12738587736838,0.448549638131936,2.15096037594227,1.16670713006429,2.19571699912143,2.02747350588934,0.821500670520278,1.3020438484395,2.20204623293993,0.724752362478018,1.72818003754719,6.00421129193539,1.21635129174099,1.74608627180206,1.29920822977795,1.61124026100733,0.993406773906324,2.64429988943931,1.18151621739662,1.51449674922221,1.295515713135,1.91569751759997,1.8516997340553,1.73181314952593,3.27255326108393,3.17422537061296,0,0,0.167884616364078,5.9888774149979,3.00291960721891,0.915758121336325,2.78678892802786,2.50786052017682,5.0827665835536,5.9842280745933,10.3121192419091,5.84300819968538,6.85082519770642,4.5323633843382,6.07520250208625,7.20513925158753,8.15656336171568,6.73088405277366,0,1.19707462020309,1.36586884603307,1.70174701947806,1.67690530102386,1.65459157605013,1.77797382241292,2.06035057238894,0.962757628775446,2.02157769411038,2.28131369901216,1.50901073108861,1.31098110457835,1.85672941974121,1.26358031702349,0.952587382566147,1.39061191133827,1.73618298417335,0.824171801606613,1.76638704161277,1.71434626192708,1.95223386775271,1.66905332963125,1.0174249164263,1.97629698872194,0.846146078916765,1.46342378298218,2.36762740294059,1.90125759384206,2.24456908663095,1.89816028998679,1.57607171800902,1.63692417267876,1.23949472948773,2.89359916471712,2.99772693525535,2.10538447600868,3.43793686477277,2.67803664896381,3.75005412503176,3.2461496986859 | ||
|short_description=p2@Paqr7 | |short_description=p2@Paqr7 | ||
}} | }} |
Latest revision as of 12:14, 26 September 2015
Short description: | p2@Paqr7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Paqr7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000125330, ENSMUST00000134506, ENSMUST00000136171, NM_027995, uc008vfd.1, uc008vfe.1, uc008vff.1_5end |
EntrezGene: | Paqr7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.88e-08 | 54 |
anatomical conduit | 1.20e-07 | 122 |
neural tube | 1.86e-07 | 52 |
neural rod | 1.86e-07 | 52 |
future spinal cord | 1.86e-07 | 52 |
neural keel | 1.86e-07 | 52 |
tube | 9.22e-07 | 114 |