FFCP PHASE1:Mm9::chr7:28327793..28327828,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18807 | |EntrezGene=18807 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=799 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z179 | |UniProt=D3Z179 | ||
|association_with_transcript=-29bp_to_ENSMUST00000150964_5end | |association_with_transcript=-29bp_to_ENSMUST00000150964_5end | ||
|cluster_id=chr7:28327793..28327828,- | |||
|description=CAGE_peak_1_at_Pld3_5end | |description=CAGE_peak_1_at_Pld3_5end | ||
|id=chr7:28327793..28327828,- | |id=chr7:28327793..28327828,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!7.75e-17!102;UBERON:0000924!7.75e-17!102;UBERON:0006601!7.75e-17!102;UBERON:0001049!4.80e-16!52;UBERON:0005068!4.80e-16!52;UBERON:0006241!4.80e-16!52;UBERON:0007135!4.80e-16!52;UBERON:0001017!9.51e-16!73;UBERON:0005743!9.51e-16!73;UBERON:0000073!1.02e-15!75;UBERON:0001016!1.02e-15!75;UBERON:0000955!2.26e-15!50;UBERON:0006238!2.26e-15!50;UBERON:0002616!6.83e-15!49;UBERON:0002346!3.25e-13!71;UBERON:0003075!3.25e-13!71;UBERON:0007284!3.25e-13!71;UBERON:0000033!6.71e-13!63;UBERON:0003080!2.92e-12!40;UBERON:0002780!1.00e-11!39;UBERON:0001890!1.00e-11!39;UBERON:0006240!1.00e-11!39;UBERON:0007811!2.03e-11!86;UBERON:0000153!2.64e-11!94;UBERON:0002020!7.85e-11!34;UBERON:0003056!4.48e-10!49;UBERON:0000475!4.22e-09!200;UBERON:0002791!8.57e-09!29;UBERON:0003528!8.57e-09!29;UBERON:0001893!8.57e-09!29;UBERON:0002021!6.42e-08!10;UBERON:0000411!6.42e-08!10;UBERON:0001950!6.42e-08!10;UBERON:0002619!9.62e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.98e-17,54;UBERON:0001049,4.80e-16,52;UBERON:0005068,4.80e-16,52;UBERON:0006241,4.80e-16,52;UBERON:0007135,4.80e-16,52;UBERON:0004121,7.66e-16,95;UBERON:0000924,7.66e-16,95;UBERON:0006601,7.66e-16,95;UBERON:0001017,9.51e-16,73;UBERON:0001016,1.02e-15,75;UBERON:0000955,7.96e-14,47;UBERON:0006238,7.96e-14,47;UBERON:0010371,2.12e-13,73;UBERON:0002616,2.34e-13,46;UBERON:0002346,1.95e-12,64;UBERON:0003075,1.95e-12,64;UBERON:0007284,1.95e-12,64;UBERON:0003080,2.92e-12,40;UBERON:0002780,1.00e-11,39;UBERON:0001890,1.00e-11,39;UBERON:0006240,1.00e-11,39;UBERON:0002020,7.85e-11,34;UBERON:0003056,4.48e-10,49;UBERON:0003528,8.57e-09,29;UBERON:0002791,8.57e-09,29;UBERON:0001893,8.57e-09,29;UBERON:0002021,6.42e-08,10;UBERON:0000411,6.42e-08,10;UBERON:0001950,6.42e-08,10;UBERON:0010314,1.60e-07,92;UBERON:0002619,9.62e-07,17 | |||
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|phase1_expression=61.3370084411361,25.126229350034,31.8499467572675,2.41971369045464,4.50806156951712,21.9921846204576,34.5746708081378,92.8396695544933,105.169175447295,119.606972950539,29.9631444394634,15.2364823681093,104.946047447829,116.356555619686,99.2667090210675,101.237633694913,112.629462378632,60.7264668314608,66.2262714315718,62.8096684661085,176.805000224074,23.1347916298063,16.194386926614,44.4778935365671,46.5700840566355,31.5827580263261,47.3838195774982,47.6191424235815,11.0213583284697,9.57714493087737,35.2551511941934,28.5763803056834,20.2971379902908,0,5.77703239502549,5.31950865147176,4.69589519403449,16.3227335987394,7.813353445238,6.80580867165938,16.4704816648684,18.442228093878,11.6522484727477,141.633920222524,129.762471960979,150.141243268255,389.630889485324,93.750817243592,171.794594898357,160.793526534432,97.710522294503,102.06432069913,60.9050859989583,121.135477715895,212.74737485718,128.115199145902,167.622062364173,92.3053045176622,107.834673638166,148.117474196169,95.7085419294331,178.232223868363,144.065756970005,1515.43112390188,2088.48575774145,1806.04045219299,513.214989318027,344.643819873434,48.4230489480591,55.2174287776615,58.6806642170356,340.21032242493,356.040088014001,49.2413012844115,40.3509432986775,40.4456266108409,386.506742307854,396.086122740252,394.922397001802,128.457244249209,129.637990984614,119.289161857498,409.840642534027,459.214289785851,455.338778374894,277.540127516195,255.699538715189,126.751623161204,52.3267995932302,141.092102719369,21.7398366526258,16.3480536626463,11.5595126730318,19.4293148989614,16.8941868536394,6.2723764193627,83.1430967179971,104.814648385506,79.4945174084778,98.2284017138746,80.7032795320379,80.8456807710202,33.1246811618639,35.5533351576666,27.9273442904466,27.3628654713106,21.2320266906209,59.6039852133493,239.776480257281,219.694365815941,64.0160855767041,113.870088888741,103.315742770714,88.9263579260473,101.949409086656,80.4266184509923,104.069081416171,36.2944385868978,155.691457143178,69.0744449275437,71.5526519811675,69.822036451472,111.835056730873,84.9064311333487,59.6923114418347,42.6613282198348,9.82484020948546,5.99902730993408,7.75128385145695,485.022090392816,1137.34649860711,114.094151718481,1212.07698470074,1149.69669615717,488.925268848645,636.147992488678,53.8730234768173,101.516088017836,122.065092323465,120.162299711177,43.460227949543,50.3485608709306,75.806156648052,69.3242162044289,50.7552283668906,58.5479701701763,47.5067743517825,99.8595011052601,29.7483830247322,42.3597619575915,64.0462091956774,69.2658514471136,83.9702692661306,120.843501783192,127.790706709333,50.5547037718973,6.31991868581911,4.11756651383544,4.83077948972507,38.7325194641389,47.8433162361436,37.6329708453521,56.5819918048652,35.4175617145327,34.7101003996601,36.0427614363132,33.2659017735528,32.5775305204403,27.3169350856378,36.9376794177964,32.2653861992506,21.1989981766732,37.7626198300607,31.6727148274477,855.880090655998,120.81001493328,25.4422462897524,21.1560453330835,34.7659848372431,40.1769442318559,32.0879978692012,25.0087570532945,34.4685967959549,41.6594121186505,18.0321043386914,42.4923303187948,34.6842588144372,38.9954685200656,37.2381406397519,17.0775687644302,20.1008386383466,22.9012464242522,34.1402221715547,39.4157368503564,47.3372489826938,49.0799700107207,46.7425494073978,38.5747009396752,45.4038336552167,27.7507078201652,31.7137430239577,34.6746030620259,25.4949259294948,49.8866866091121,69.9750022603003,77.1277045480048,112.587367370619,131.923906384572,145.136735515409,118.530808629734,77.824908852017,54.6377212244282,35.9420516318386,69.5903572140101,51.4862160639025,25.5104666726583,24.0392534119362,30.8763853672555,98.1039439784671,31.26608294213,30.9633455239849,34.4582524123632,37.7851299744488,57.1196337876592,77.3641832879545,62.6379009623534,90.1673024287413,78.8414295149639,74.624831731704,68.82259218061,85.997120969216,100.965042889895,891.176488081099,572.188779377282,88.5175691434265,63.4654516500885,421.926950487917,336.866387265992,6.55739781506702,44.1824122607653,39.1230192076158,45.6813330827067,53.2095792400013,54.962823529087,59.2644473059168,43.876862272269,40.4810701674894,62.2504977351094,65.2224833611764,336.744739610054,113.552068166615,96.8676883949868,62.2228184730661,75.0614059525036,195.135353359745,57.5390107687306,39.3020624054176,66.3889880740761,118.711360938071,101.146163673552,54.2699415653264,73.4338133544561,65.239020244404,106.820424182306,206.620472806998,178.424489819363,879.355501662034,45.7355178839528,76.0629060642596,95.3799805890586,243.665481024484,361.018486826591,459.585414541724,968.198538184426,36.6087864579388,146.799625108627,179.951172812849,193.411574700356,108.988488019736,94.0881628879231,140.381876547688,169.393408536903,25.6503136234269,356.758281068221,161.302111473173,62.9479947287829,67.7811970173145,129.785866876232,81.8798424048941,118.964650067392,32.4658801288264,35.5476688902091,38.143192770021,443.921837377028,40.8073431719665,48.1867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| ||
|short_description=p1@Pld3 | |short_description=p1@Pld3 | ||
}} | }} |
Latest revision as of 11:55, 26 September 2015
Short description: | p1@Pld3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pld3_5end |
Coexpression cluster: | MCL_coexpression_mm9:799 |
Association with transcript: | -29bp_to_ENSMUST00000150964_5end |
EntrezGene: | Pld3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.98e-17 | 54 |
neural tube | 4.80e-16 | 52 |
neural rod | 4.80e-16 | 52 |
future spinal cord | 4.80e-16 | 52 |
neural keel | 4.80e-16 | 52 |
ectoderm-derived structure | 7.66e-16 | 95 |
ectoderm | 7.66e-16 | 95 |
presumptive ectoderm | 7.66e-16 | 95 |
central nervous system | 9.51e-16 | 73 |
nervous system | 1.02e-15 | 75 |
brain | 7.96e-14 | 47 |
future brain | 7.96e-14 | 47 |
ecto-epithelium | 2.12e-13 | 73 |
regional part of brain | 2.34e-13 | 46 |
neurectoderm | 1.95e-12 | 64 |
neural plate | 1.95e-12 | 64 |
presumptive neural plate | 1.95e-12 | 64 |
anterior neural tube | 2.92e-12 | 40 |
regional part of forebrain | 1.00e-11 | 39 |
forebrain | 1.00e-11 | 39 |
future forebrain | 1.00e-11 | 39 |
gray matter | 7.85e-11 | 34 |
pre-chordal neural plate | 4.48e-10 | 49 |
brain grey matter | 8.57e-09 | 29 |
regional part of telencephalon | 8.57e-09 | 29 |
telencephalon | 8.57e-09 | 29 |
occipital lobe | 6.42e-08 | 10 |
visual cortex | 6.42e-08 | 10 |
neocortex | 6.42e-08 | 10 |
structure with developmental contribution from neural crest | 1.60e-07 | 92 |
regional part of cerebral cortex | 9.62e-07 | 17 |