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FFCP PHASE1:Mm9::chr2:27532912..27532923,+: Difference between revisions

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{{FFCP|EntrezGene=20181|HGNC=|MCL_coexpression_id=111|UniProt=P28700,A2AJP1,Q3UMU4,P28704|association_with_transcript=191bp_to_ENSMUST00000077257,NM_011305,uc008ixs.1_5end|description=CAGE_peak_9_at_Rxra_5end|id=chr2:27532912..27532923,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,6.39e-20,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!3.15e-08!22;UBERON:0007499!3.15e-08!22;UBERON:0006925!3.15e-08!22;UBERON:0009497!3.15e-08!22;UBERON:0000015!3.15e-08!22;UBERON:0002423!3.15e-08!22;UBERON:0006235!3.15e-08!22;UBERON:0008835!3.15e-08!22;UBERON:0003894!3.15e-08!22;UBERON:0004161!3.15e-08!22;UBERON:0008836!3.15e-08!22;UBERON:0009854!1.72e-07!23;UBERON:0009856!1.72e-07!23;UBERON:0005172!5.23e-07!49;UBERON:0005173!5.23e-07!49;UBERON:0002417!5.23e-07!49;UBERON:0000916!5.23e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.21e-13,22;UBERON:0007499,1.21e-13,22;UBERON:0006925,1.21e-13,22;UBERON:0009497,1.21e-13,22;UBERON:0000015,1.21e-13,22;UBERON:0002423,1.21e-13,22;UBERON:0006235,1.21e-13,22;UBERON:0008835,1.21e-13,22;UBERON:0003894,1.21e-13,22;UBERON:0004161,1.21e-13,22;UBERON:0008836,1.21e-13,22;UBERON:0009854,5.01e-13,23;UBERON:0009856,5.01e-13,23;UBERON:0002365,6.08e-12,25;UBERON:0002330,6.08e-12,25|phase1_expression=0.320297694209588,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0,0.129123323441576,0,0,0,0,0,0,0,0,0.699561878128147,0,0.137114433605739,0,0,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.811015449756117,0.183546752161682,2.34717403304412,0,0,0.194429899074283,0,0,0,0,0,0,0.85960031981627,0,0,0.528990979272033,0,0.338844532069132,0,0.449949858640699,0,2.1314403448383,0.299600110518405,0,0.311068836925433,0.135005938331691,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0,0.860423876981386,1.3599426674155,1.61910957491345,1.94932925234301,1.79210754838934,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0,1.82694207550496,0.258937883647172,0.29688427812965,0.173485326766136,0,0.230615497256059,0,0.587943535678524,0,0.741584903203122,0.722996784599558,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0,0.203678727700633,0.373220911830279,0,0.631325567659422,0.260240885925407,0,0,0.150704817835715,0.136072998302656,0.384341160854549,0.187403449119458,0,0.431135985865684,0.567318240503458,0.351902248327898,0.876782929710299,0.556094498451196,0,0.205782136407943,0.199034266818493,0,0,0,0,0.469052119962192,0.180062061461015,0.473489471170421,0.590292695242212,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,0,0.308713837137853,0.330418782983798,0,0.426576501070468,0.232236671860439,0,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0,0.795825888164603,0.38992817423824,0,0.432276099749388,0.796565093017469,0.758671603812327,0.114248512609729,0,0.203651327845314,0.193952487167626,0.771494018793504,0.379419222745544,0.295220295959204,0.31399745568275,0.493588655687202,0.296452627087149,0.333690211432188,0.393117990226406,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,6.97181475132652,0.549122826376163,0,2.60498663367952,0.312037673114561,0.757736633841335,0.538192240565737,3.85954817090694,0.739012760666419,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0.975668239288994,0.630540576424764,0.8858587585951,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0.234423373184406,0.163934945376675,0.252470927204373,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,0,0.567760340833074,0.534196811001766,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0.540183282093931,0.646793418913773,0,0.177340233642274,0.356737635204141,0.164549020602121,0.913394847343798,0.469343416127421,0.42366414172764,0,0.16488625294148,3.22928853391811,0.422190474497091,0.358117032009409,0.328281799490123,0,0.18542530201051,0.341741761595705,0,0,0.188368457004691,0,0.228778173206523,0.169978429993855,0,0,0,0.316335993581135,0,0,0,0,0.404593039154462,0.743881101528023,0,0.90730481304255,0,0,0.448549638131936,0.165458490457098,0.194451188344048,0,0,0.469428954583016,0,0.314578033277133,0,0.288030006257865,0,0,0.308132871494482,0.129920822977795,0.179026695667481,0,0,0,0.201932899896295,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.116876902181569,0.680191150845634,0,0.0897138566094757,0.167884616364078,0.579568782096571,0.187682475451182,0.549454872801795,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,1.99512436700516,0.853668028770671,0,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0,0,0.354951612318675,0.238436189947321,0.436039249896986,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0.197008964751127,0.409231043169689,0,0.192906610981141,0.749431733813838,0.233931608445408,1.50409737833809,1.3390183244819,0.661774257358546,0|short_description=p9@Rxra}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20181
|HGNC=
|MCL_coexpression_id=111
|TSSclassifier=NA
|UniProt=P28700,A2AJP1,Q3UMU4,P28704
|association_with_transcript=191bp_to_ENSMUST00000077257,NM_011305,uc008ixs.1_5end
|cluster_id=chr2:27532912..27532923,+
|description=CAGE_peak_9_at_Rxra_5end
|id=chr2:27532912..27532923,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,6.39e-20,5
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!3.15e-08!22;UBERON:0007499!3.15e-08!22;UBERON:0006925!3.15e-08!22;UBERON:0009497!3.15e-08!22;UBERON:0000015!3.15e-08!22;UBERON:0002423!3.15e-08!22;UBERON:0006235!3.15e-08!22;UBERON:0008835!3.15e-08!22;UBERON:0003894!3.15e-08!22;UBERON:0004161!3.15e-08!22;UBERON:0008836!3.15e-08!22;UBERON:0009854!1.72e-07!23;UBERON:0009856!1.72e-07!23;UBERON:0005172!5.23e-07!49;UBERON:0005173!5.23e-07!49;UBERON:0002417!5.23e-07!49;UBERON:0000916!5.23e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.21e-13,22;UBERON:0007499,1.21e-13,22;UBERON:0006925,1.21e-13,22;UBERON:0009497,1.21e-13,22;UBERON:0000015,1.21e-13,22;UBERON:0002423,1.21e-13,22;UBERON:0006235,1.21e-13,22;UBERON:0008835,1.21e-13,22;UBERON:0003894,1.21e-13,22;UBERON:0004161,1.21e-13,22;UBERON:0008836,1.21e-13,22;UBERON:0009854,5.01e-13,23;UBERON:0009856,5.01e-13,23;UBERON:0002365,6.08e-12,25;UBERON:0002330,6.08e-12,25
|phase1_expression=0.320297694209588,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0,0.129123323441576,0,0,0,0,0,0,0,0,0.699561878128147,0,0.137114433605739,0,0,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.811015449756117,0.183546752161682,2.34717403304412,0,0,0.194429899074283,0,0,0,0,0,0,0.85960031981627,0,0,0.528990979272033,0,0.338844532069132,0,0.449949858640699,0,2.1314403448383,0.299600110518405,0,0.311068836925433,0.135005938331691,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0,0.860423876981386,1.3599426674155,1.61910957491345,1.94932925234301,1.79210754838934,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0,1.82694207550496,0.258937883647172,0.29688427812965,0.173485326766136,0,0.230615497256059,0,0.587943535678524,0,0.741584903203122,0.722996784599558,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0,0.203678727700633,0.373220911830279,0,0.631325567659422,0.260240885925407,0,0,0.150704817835715,0.136072998302656,0.384341160854549,0.187403449119458,0,0.431135985865684,0.567318240503458,0.351902248327898,0.876782929710299,0.556094498451196,0,0.205782136407943,0.199034266818493,0,0,0,0,0.469052119962192,0.180062061461015,0.473489471170421,0.590292695242212,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,0,0.308713837137853,0.330418782983798,0,0.426576501070468,0.232236671860439,0,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0,0.795825888164603,0.38992817423824,0,0.432276099749388,0.796565093017469,0.758671603812327,0.114248512609729,0,0.203651327845314,0.193952487167626,0.771494018793504,0.379419222745544,0.295220295959204,0.31399745568275,0.493588655687202,0.296452627087149,0.333690211432188,0.393117990226406,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,6.97181475132652,0.549122826376163,0,2.60498663367952,0.312037673114561,0.757736633841335,0.538192240565737,3.85954817090694,0.739012760666419,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0.975668239288994,0.630540576424764,0.8858587585951,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0.234423373184406,0.163934945376675,0.252470927204373,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,0,0.567760340833074,0.534196811001766,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0.540183282093931,0.646793418913773,0,0.177340233642274,0.356737635204141,0.164549020602121,0.913394847343798,0.469343416127421,0.42366414172764,0,0.16488625294148,3.22928853391811,0.422190474497091,0.358117032009409,0.328281799490123,0,0.18542530201051,0.341741761595705,0,0,0.188368457004691,0,0.228778173206523,0.169978429993855,0,0,0,0.316335993581135,0,0,0,0,0.404593039154462,0.743881101528023,0,0.90730481304255,0,0,0.448549638131936,0.165458490457098,0.194451188344048,0,0,0.469428954583016,0,0.314578033277133,0,0.288030006257865,0,0,0.308132871494482,0.129920822977795,0.179026695667481,0,0,0,0.201932899896295,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.116876902181569,0.680191150845634,0,0.0897138566094757,0.167884616364078,0.579568782096571,0.187682475451182,0.549454872801795,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,1.99512436700516,0.853668028770671,0,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0,0,0.354951612318675,0.238436189947321,0.436039249896986,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0.197008964751127,0.409231043169689,0,0.192906610981141,0.749431733813838,0.233931608445408,1.50409737833809,1.3390183244819,0.661774257358546,0
|short_description=p9@Rxra
}}

Latest revision as of 11:43, 26 September 2015

Short description:p9@Rxra
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Rxra_5end
Coexpression cluster:MCL_coexpression_mm9:111
Association with transcript: 191bp_to_ENSMUST00000077257, NM_011305, uc008ixs.1_5end
EntrezGene:Rxra
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Rxra

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F46.97
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte6.39e-205

Uber anatomy
Ontology termp-valuen
liver1.21e-1322
epithelial sac1.21e-1322
digestive gland1.21e-1322
epithelium of foregut-midgut junction1.21e-1322
anatomical boundary1.21e-1322
hepatobiliary system1.21e-1322
foregut-midgut junction1.21e-1322
hepatic diverticulum1.21e-1322
liver primordium1.21e-1322
septum transversum1.21e-1322
liver bud1.21e-1322
digestive tract diverticulum5.01e-1323
sac5.01e-1323
exocrine gland6.08e-1225
exocrine system6.08e-1225
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