FFCP PHASE1:Mm9::chr7:28043859..28043878,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18223 | |EntrezGene=18223 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=398 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=34bp_to_ENSMUST00000149805_5end | |association_with_transcript=34bp_to_ENSMUST00000149805_5end | ||
|cluster_id=chr7:28043859..28043878,+ | |||
|description=CAGE_peak_2_at_Numbl_5end | |description=CAGE_peak_2_at_Numbl_5end | ||
|id=chr7:28043859..28043878,+ | |id=chr7:28043859..28043878,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.99e-11!50;CL:0000221!2.11e-11!44;CL:0000133!2.11e-11!44;CL:0002319!6.53e-11!43;CL:0000393!5.15e-10!39;CL:0000211!5.15e-10!39;CL:0000540!9.98e-09!33;CL:0000047!9.98e-09!33;CL:0000031!9.98e-09!33;CL:0000404!9.98e-09!33;CL:0000117!1.20e-08!23;CL:0000337!1.20e-08!23 | |ontology_enrichment_celltype=CL:0000055!1.99e-11!50;CL:0000221!2.11e-11!44;CL:0000133!2.11e-11!44;CL:0002319!6.53e-11!43;CL:0000393!5.15e-10!39;CL:0000211!5.15e-10!39;CL:0000540!9.98e-09!33;CL:0000047!9.98e-09!33;CL:0000031!9.98e-09!33;CL:0000404!9.98e-09!33;CL:0000117!1.20e-08!23;CL:0000337!1.20e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.43e-11,44;CL:0000133,1.43e-11,44;CL:0002319,4.51e-11,43;CL:0000393,3.69e-10,39;CL:0000211,3.69e-10,39;CL:0000540,7.52e-09,33;CL:0000047,7.52e-09,33;CL:0000031,7.52e-09,33;CL:0000404,7.52e-09,33;CL:0000117,9.06e-09,23;CL:0000337,9.06e-09,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.45e-22!102;UBERON:0000924!2.45e-22!102;UBERON:0006601!2.45e-22!102;UBERON:0000073!2.13e-20!75;UBERON:0001016!2.13e-20!75;UBERON:0001017!3.51e-20!73;UBERON:0005743!3.51e-20!73;UBERON:0002346!1.06e-17!71;UBERON:0003075!1.06e-17!71;UBERON:0007284!1.06e-17!71;UBERON:0001049!6.28e-17!52;UBERON:0005068!6.28e-17!52;UBERON:0006241!6.28e-17!52;UBERON:0007135!6.28e-17!52;UBERON:0000033!3.20e-16!63;UBERON:0003056!3.97e-14!49;UBERON:0002616!9.22e-14!49;UBERON:0000955!9.78e-14!50;UBERON:0006238!9.78e-14!50;UBERON:0002020!6.11e-13!34;UBERON:0003080!2.82e-12!40;UBERON:0002780!7.79e-12!39;UBERON:0001890!7.79e-12!39;UBERON:0006240!7.79e-12!39;UBERON:0002791!4.62e-10!29;UBERON:0003528!4.62e-10!29;UBERON:0001893!4.62e-10!29;UBERON:0000153!1.57e-09!94;UBERON:0007811!6.76e-08!86;UBERON:0000468!8.66e-08!333;UBERON:0000956!3.41e-07!21;UBERON:0001869!3.41e-07!21;UBERON:0000203!3.41e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.17e-24,95;UBERON:0000924,9.17e-24,95;UBERON:0006601,9.17e-24,95;UBERON:0010371,7.48e-21,73;UBERON:0001016,1.01e-20,75;UBERON:0001017,1.68e-20,73;UBERON:0002346,1.99e-19,64;UBERON:0003075,1.99e-19,64;UBERON:0007284,1.99e-19,64;UBERON:0001049,3.42e-17,52;UBERON:0005068,3.42e-17,52;UBERON:0006241,3.42e-17,52;UBERON:0007135,3.42e-17,52;UBERON:0000073,5.88e-17,54;UBERON:0010314,1.50e-16,92;UBERON:0003056,2.42e-14,49;UBERON:0002616,7.12e-14,46;UBERON:0000955,7.73e-14,47;UBERON:0006238,7.73e-14,47;UBERON:0002020,3.90e-13,34;UBERON:0003080,1.84e-12,40;UBERON:0002780,5.19e-12,39;UBERON:0001890,5.19e-12,39;UBERON:0006240,5.19e-12,39;UBERON:0003528,3.30e-10,29;UBERON:0002791,3.30e-10,29;UBERON:0001893,3.30e-10,29;UBERON:0000956,2.72e-07,21;UBERON:0001869,2.72e-07,21;UBERON:0000203,2.72e-07,21 | |||
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| ||
|short_description=p2@Numbl | |short_description=p2@Numbl | ||
}} | }} |
Latest revision as of 11:37, 26 September 2015
Short description: | p2@Numbl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Numbl_5end |
Coexpression cluster: | MCL_coexpression_mm9:398 |
Association with transcript: | 34bp_to_ENSMUST00000149805_5end |
EntrezGene: | Numbl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.43e-11 | 44 |
neurectodermal cell | 1.43e-11 | 44 |
neural cell | 4.51e-11 | 43 |
electrically responsive cell | 3.69e-10 | 39 |
electrically active cell | 3.69e-10 | 39 |
neuron | 7.52e-09 | 33 |
neuronal stem cell | 7.52e-09 | 33 |
neuroblast | 7.52e-09 | 33 |
electrically signaling cell | 7.52e-09 | 33 |
CNS neuron (sensu Vertebrata) | 9.06e-09 | 23 |
neuroblast (sensu Vertebrata) | 9.06e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 9.17e-24 | 95 |
ectoderm | 9.17e-24 | 95 |
presumptive ectoderm | 9.17e-24 | 95 |
ecto-epithelium | 7.48e-21 | 73 |
nervous system | 1.01e-20 | 75 |
central nervous system | 1.68e-20 | 73 |
neurectoderm | 1.99e-19 | 64 |
neural plate | 1.99e-19 | 64 |
presumptive neural plate | 1.99e-19 | 64 |
neural tube | 3.42e-17 | 52 |
neural rod | 3.42e-17 | 52 |
future spinal cord | 3.42e-17 | 52 |
neural keel | 3.42e-17 | 52 |
regional part of nervous system | 5.88e-17 | 54 |
structure with developmental contribution from neural crest | 1.50e-16 | 92 |
pre-chordal neural plate | 2.42e-14 | 49 |
regional part of brain | 7.12e-14 | 46 |
brain | 7.73e-14 | 47 |
future brain | 7.73e-14 | 47 |
gray matter | 3.90e-13 | 34 |
anterior neural tube | 1.84e-12 | 40 |
regional part of forebrain | 5.19e-12 | 39 |
forebrain | 5.19e-12 | 39 |
future forebrain | 5.19e-12 | 39 |
brain grey matter | 3.30e-10 | 29 |
regional part of telencephalon | 3.30e-10 | 29 |
telencephalon | 3.30e-10 | 29 |
cerebral cortex | 2.72e-07 | 21 |
cerebral hemisphere | 2.72e-07 | 21 |
pallium | 2.72e-07 | 21 |