FFCP PHASE1:Mm9::chr17:37187578..37187594,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54393 | |EntrezGene=54393 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q9WV18 | |UniProt=Q9WV18 | ||
|association_with_transcript=2bp_to_ENSMUST00000172792_5end | |association_with_transcript=2bp_to_ENSMUST00000172792_5end | ||
|cluster_id=chr17:37187578..37187594,+ | |||
|description=CAGE_peak_2_at_Gabbr1_5end | |description=CAGE_peak_2_at_Gabbr1_5end | ||
|id=chr17:37187578..37187594,+ | |id=chr17:37187578..37187594,+ | ||
|ontology_enrichment_celltype=CL:0000117!8.95e-14!23;CL:0000337!8.95e-14!23;CL:0000221!3.20e-13!44;CL:0000133!3.20e-13!44;CL:0002319!4.30e-13!43;CL:0000055!1.90e-11!50;CL:0000540!7.02e-11!33;CL:0000047!7.02e-11!33;CL:0000031!7.02e-11!33;CL:0000404!7.02e-11!33;CL:0000393!5.85e-10!39;CL:0000211!5.85e-10!39 | |ontology_enrichment_celltype=CL:0000117!8.95e-14!23;CL:0000337!8.95e-14!23;CL:0000221!3.20e-13!44;CL:0000133!3.20e-13!44;CL:0002319!4.30e-13!43;CL:0000055!1.90e-11!50;CL:0000540!7.02e-11!33;CL:0000047!7.02e-11!33;CL:0000031!7.02e-11!33;CL:0000404!7.02e-11!33;CL:0000393!5.85e-10!39;CL:0000211!5.85e-10!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.16e-15,23;CL:0000337,3.16e-15,23;CL:0000221,4.38e-14,44;CL:0000133,4.38e-14,44;CL:0002319,6.11e-14,43;CL:0000540,1.86e-11,33;CL:0000047,1.86e-11,33;CL:0000031,1.86e-11,33;CL:0000404,1.86e-11,33;CL:0000393,3.58e-10,39;CL:0000211,3.58e-10,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.83e-29!73;UBERON:0005743!1.83e-29!73;UBERON:0000073!2.41e-29!75;UBERON:0001016!2.41e-29!75;UBERON:0001049!6.09e-26!52;UBERON:0005068!6.09e-26!52;UBERON:0006241!6.09e-26!52;UBERON:0007135!6.09e-26!52;UBERON:0004121!9.41e-26!102;UBERON:0000924!9.41e-26!102;UBERON:0006601!9.41e-26!102;UBERON:0000955!4.82e-25!50;UBERON:0006238!4.82e-25!50;UBERON:0002346!1.99e-24!71;UBERON:0003075!1.99e-24!71;UBERON:0007284!1.99e-24!71;UBERON:0002616!2.02e-24!49;UBERON:0000033!3.05e-24!63;UBERON:0003056!5.74e-20!49;UBERON:0002020!9.88e-20!34;UBERON:0003080!3.76e-19!40;UBERON:0002780!1.73e-18!39;UBERON:0001890!1.73e-18!39;UBERON:0006240!1.73e-18!39;UBERON:0002791!1.03e-16!29;UBERON:0003528!1.03e-16!29;UBERON:0001893!1.03e-16!29;UBERON:0000956!5.04e-12!21;UBERON:0001869!5.04e-12!21;UBERON:0000203!5.04e-12!21;UBERON:0002619!4.13e-10!17;UBERON:0007811!8.49e-10!86;UBERON:0000153!4.19e-09!94;UBERON:0003076!2.53e-07!12;UBERON:0003057!2.53e-07!12;UBERON:0002021!2.62e-07!10;UBERON:0000411!2.62e-07!10;UBERON:0001950!2.62e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!1.83e-29!73;UBERON:0005743!1.83e-29!73;UBERON:0000073!2.41e-29!75;UBERON:0001016!2.41e-29!75;UBERON:0001049!6.09e-26!52;UBERON:0005068!6.09e-26!52;UBERON:0006241!6.09e-26!52;UBERON:0007135!6.09e-26!52;UBERON:0004121!9.41e-26!102;UBERON:0000924!9.41e-26!102;UBERON:0006601!9.41e-26!102;UBERON:0000955!4.82e-25!50;UBERON:0006238!4.82e-25!50;UBERON:0002346!1.99e-24!71;UBERON:0003075!1.99e-24!71;UBERON:0007284!1.99e-24!71;UBERON:0002616!2.02e-24!49;UBERON:0000033!3.05e-24!63;UBERON:0003056!5.74e-20!49;UBERON:0002020!9.88e-20!34;UBERON:0003080!3.76e-19!40;UBERON:0002780!1.73e-18!39;UBERON:0001890!1.73e-18!39;UBERON:0006240!1.73e-18!39;UBERON:0002791!1.03e-16!29;UBERON:0003528!1.03e-16!29;UBERON:0001893!1.03e-16!29;UBERON:0000956!5.04e-12!21;UBERON:0001869!5.04e-12!21;UBERON:0000203!5.04e-12!21;UBERON:0002619!4.13e-10!17;UBERON:0007811!8.49e-10!86;UBERON:0000153!4.19e-09!94;UBERON:0003076!2.53e-07!12;UBERON:0003057!2.53e-07!12;UBERON:0002021!2.62e-07!10;UBERON:0000411!2.62e-07!10;UBERON:0001950!2.62e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.84e-32,73;UBERON:0001016,5.14e-32,75;UBERON:0000073,8.21e-31,54;UBERON:0001049,7.48e-29,52;UBERON:0005068,7.48e-29,52;UBERON:0006241,7.48e-29,52;UBERON:0007135,7.48e-29,52;UBERON:0002346,8.28e-29,64;UBERON:0003075,8.28e-29,64;UBERON:0007284,8.28e-29,64;UBERON:0004121,1.69e-27,95;UBERON:0000924,1.69e-27,95;UBERON:0006601,1.69e-27,95;UBERON:0000955,2.93e-25,47;UBERON:0006238,2.93e-25,47;UBERON:0002616,1.41e-24,46;UBERON:0010371,8.06e-24,73;UBERON:0003056,3.68e-22,49;UBERON:0002020,6.76e-22,34;UBERON:0003080,3.02e-21,40;UBERON:0002780,1.66e-20,39;UBERON:0001890,1.66e-20,39;UBERON:0006240,1.66e-20,39;UBERON:0003528,1.63e-18,29;UBERON:0002791,1.63e-18,29;UBERON:0001893,1.63e-18,29;UBERON:0010314,4.98e-17,92;UBERON:0000956,2.88e-13,21;UBERON:0001869,2.88e-13,21;UBERON:0000203,2.88e-13,21;UBERON:0002619,3.97e-11,17;UBERON:0003076,5.18e-08,12;UBERON:0003057,5.18e-08,12;UBERON:0002021,5.41e-08,10;UBERON:0000411,5.41e-08,10;UBERON:0001950,5.41e-08,10 | |||
|phase1_expression=4.48416771893423,0.348975407639361,0,0,0,0.503637815735669,0.233612640595526,0,0.84473233291,0.70219357896598,0,0,0,0,2.33176833270964,0.404950534779652,2.09868563438444,0.473193248037357,0.411343300817216,1.27316895539409,49.920411318678,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,2.3440060335714,2.61761871986899,23.5292595212406,15.0270006690858,15.0508209439658,0.629484089877886,0.304130793658544,1.65192076945513,10.1710874765245,3.05235218932625,16.2567775223509,5.63846707315422,4.75953833526233,5.75010257459886,0.167782606057736,0,1.34437519656986,3.34437266846731,1.43266719969378,3.6097046459421,65.1459003967905,68.2398363260922,47.5373552629634,2.71075625655306,5.33576877666684,0.899899717281399,0.988866362566974,0,11.3848041996994,13.0634223809329,34.1138824494891,31.3213776929522,32.6003690094642,233.948156226715,227.494597180162,32.3375709927479,34.7919059796198,34.9303138911808,294.009402268368,474.103086310302,408.286165395095,63.4373043982232,77.1240835568313,63.5514312079247,300.400906925486,287.571693726188,282.982354882652,130.225834779361,137.531043651933,56.2926326392408,1.74170244666323,1.66257432234928,0.869593466105033,0,0,0,0,0,10.2524426696179,0.511290967734173,0.259786004602869,0.35333957451034,3.52108549441701,2.56652954828636,0,0,0,0,0,7.07940054258172,0.258937883647172,0.742210695324124,1.56136794089522,2.13125834818499,1.61430848079241,1.05505848386836,1.41106448562846,0.502666365318702,1.97755974187499,0.144599356919912,3.5384422077995,1.29413479957927,0.883366073841574,0,0,197.627037982794,232.695291269749,0.766371165625774,0,0,0.254140454146129,201.767991278296,159.210209780882,68.3559675493982,202.33150870381,192.298023912409,303.162757012398,229.733628503945,1.62942982160506,0.870848794270651,0,2.52530227063769,2.47228841629137,1.60931473103431,4.32149111532838,4.37043971723574,4.69451844144162,4.86832137082429,5.62210347358373,4.9153640440413,0.431135985865684,1.70195472151037,1.75951124163949,0.876782929710299,2.22437799380478,0.348252166522167,1.64625709126355,0.995171334092466,0,0,0,0.828503090142008,1.17263029990548,0.540186184383045,0.710234206755631,0.196764231747404,0.771335564436891,0,0.268273401399619,0.116765342367169,0.329119699826961,0,0.243206428637567,0.146199987425332,0,0.134206418760372,180.008195970893,57.2149644828821,0.660837565967596,0.528901133327089,1.2797295032114,0.696710015581316,1.28867461322093,1.21010114774006,0.889512175379481,0.380451252225118,2.37264530772256,0.988193728344065,0.251335208800269,1.1937388322469,1.9496408711912,0,0.648414149624083,0.995706366271836,0,0.342745537829186,0,0.407302655690628,0,0.49095073923223,0.316182685621286,0.295220295959204,0.627994911365499,0.123397163921801,0,0,0,0.224862112384854,0.202860121388503,0,0,0.863088412352432,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,1.32643988239339,1.30371981153621,1.01847051465113,0.469380496577004,1.00503754465089,0.952174563544055,0,0.157635144106191,0.221464689648775,0.318909537314974,0.491589944147214,0,0.723245292907558,0,0,0.983528546038072,0.551873492609465,128.761573170209,124.47881116092,3.27869890753351,0.252470927204373,2.2085575359138,0.390438744296638,1.72338718186239,0.477937595905104,1.11399337041197,1.13230612315533,0.404810701674894,1.75353514746787,2.76701444562566,150.699697401828,0.851640511249612,0.890328018336276,0.977321756121456,1.48473110675282,0,0.971122544619926,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0.727067458955011,0,1.58018378967908,1.05418608574999,0,1.70219802876894,2.52085531643834,3.10460841078611,4.07240366560025,3.01478397191865,3.56737635204141,3.9491764944509,9.43841342255258,3.05073220482823,0,0.441056796109924,0.98931751764888,1.13025098687134,0.422190474497091,0.596861720015682,0.328281799490123,0.874442509889552,133.135366843546,1.19609616558497,1.44470807574256,1.11116716421827,0.941842285023455,0.956859594047176,0.915112692826091,0.339956859987711,0.419854356970974,0.414599921413271,0,0.474503990371703,0.813277868507395,1.08005340821801,1.46361807210128,1.31017538247707,1.34864346384821,0.991841468704031,1.04702376793612,2.07383957266869,0,1.12738587736838,1.49516546043979,2.48187735685646,1.75006069509643,2.71235629303235,2.19642963138012,2.8165737274981,2.0832701575032,1.78260885523708,2.41584120826006,2.59227005632079,0,0.405450430580328,0.102710957164827,0.389762468933385,0,0,0,0,0,0,0.201652370273681,0,0.0962118416403295,0.350630706544707,0.226730383615211,1.10992976687032,3.85769583420746,1.51096154727671,0.579568782096571,3.37828455812128,1.46521299413812,0.857473516316263,0.501572104035363,165.4722898868,195.63822551555,171.29575851838,181.133254190247,191.82310553578,190.359262142205,194.40648006676,208.498717092814,213.43007463156,188.982513789414,1.45302286617847,5.58634822761443,5.80494259564056,6.32077464377565,5.8691685535835,11.2144540154509,6.44515510624684,6.79915688888351,6.73930340142812,7.32821914115013,8.61829619626815,9.24269072791773,9.2705092395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| ||
|short_description=p2@Gabbr1 | |short_description=p2@Gabbr1 | ||
}} | }} |
Latest revision as of 11:30, 26 September 2015
Short description: | p2@Gabbr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gabbr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 2bp_to_ENSMUST00000172792_5end |
EntrezGene: | Gabbr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.16e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.16e-15 | 23 |
ectodermal cell | 4.38e-14 | 44 |
neurectodermal cell | 4.38e-14 | 44 |
neural cell | 6.11e-14 | 43 |
neuron | 1.86e-11 | 33 |
neuronal stem cell | 1.86e-11 | 33 |
neuroblast | 1.86e-11 | 33 |
electrically signaling cell | 1.86e-11 | 33 |
electrically responsive cell | 3.58e-10 | 39 |
electrically active cell | 3.58e-10 | 39 |