FFCP PHASE1:Mm9::chr17:37183039..37183080,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54393 | |EntrezGene=54393 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |MCL_coexpression_id=13 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-63bp_to_ENSMUST00000174826_5end | |association_with_transcript=-63bp_to_ENSMUST00000174826_5end | ||
|cluster_id=chr17:37183039..37183080,+ | |||
|description=CAGE_peak_3_at_Gabbr1_5end | |description=CAGE_peak_3_at_Gabbr1_5end | ||
|id=chr17:37183039..37183080,+ | |id=chr17:37183039..37183080,+ | ||
|ontology_enrichment_celltype=CL:0000221!1.13e-13!44;CL:0000133!1.13e-13!44;CL:0000117!1.42e-13!23;CL:0000337!1.42e-13!23;CL:0002319!2.82e-13!43;CL:0000540!4.91e-11!33;CL:0000047!4.91e-11!33;CL:0000031!4.91e-11!33;CL:0000404!4.91e-11!33;CL:0000055!3.81e-10!50;CL:0000393!1.26e-08!39;CL:0000211!1.26e-08!39 | |ontology_enrichment_celltype=CL:0000221!1.13e-13!44;CL:0000133!1.13e-13!44;CL:0000117!1.42e-13!23;CL:0000337!1.42e-13!23;CL:0002319!2.82e-13!43;CL:0000540!4.91e-11!33;CL:0000047!4.91e-11!33;CL:0000031!4.91e-11!33;CL:0000404!4.91e-11!33;CL:0000055!3.81e-10!50;CL:0000393!1.26e-08!39;CL:0000211!1.26e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.69e-18,23;CL:0000337,3.69e-18,23;CL:0000221,1.74e-16,44;CL:0000133,1.74e-16,44;CL:0002319,6.00e-16,43;CL:0000540,1.99e-14,33;CL:0000047,1.99e-14,33;CL:0000031,1.99e-14,33;CL:0000404,1.99e-14,33;CL:0000393,1.42e-10,39;CL:0000211,1.42e-10,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.11e-29!73;UBERON:0005743!1.11e-29!73;UBERON:0000073!2.26e-29!75;UBERON:0001016!2.26e-29!75;UBERON:0004121!6.12e-26!102;UBERON:0000924!6.12e-26!102;UBERON:0006601!6.12e-26!102;UBERON:0001049!1.47e-25!52;UBERON:0005068!1.47e-25!52;UBERON:0006241!1.47e-25!52;UBERON:0007135!1.47e-25!52;UBERON:0000955!6.38e-24!50;UBERON:0006238!6.38e-24!50;UBERON:0000033!1.41e-23!63;UBERON:0002346!1.54e-23!71;UBERON:0003075!1.54e-23!71;UBERON:0007284!1.54e-23!71;UBERON:0002616!3.18e-23!49;UBERON:0002020!5.13e-20!34;UBERON:0003056!2.81e-19!49;UBERON:0003080!5.52e-19!40;UBERON:0002780!2.12e-18!39;UBERON:0001890!2.12e-18!39;UBERON:0006240!2.12e-18!39;UBERON:0002791!1.61e-16!29;UBERON:0003528!1.61e-16!29;UBERON:0001893!1.61e-16!29;UBERON:0007811!2.04e-14!86;UBERON:0000153!2.25e-14!94;UBERON:0000956!1.70e-11!21;UBERON:0001869!1.70e-11!21;UBERON:0000203!1.70e-11!21;UBERON:0002619!7.75e-10!17;UBERON:0000025!2.78e-07!114;UBERON:0003076!4.01e-07!12;UBERON:0003057!4.01e-07!12;UBERON:0002021!4.72e-07!10;UBERON:0000411!4.72e-07!10;UBERON:0001950!4.72e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!1.11e-29!73;UBERON:0005743!1.11e-29!73;UBERON:0000073!2.26e-29!75;UBERON:0001016!2.26e-29!75;UBERON:0004121!6.12e-26!102;UBERON:0000924!6.12e-26!102;UBERON:0006601!6.12e-26!102;UBERON:0001049!1.47e-25!52;UBERON:0005068!1.47e-25!52;UBERON:0006241!1.47e-25!52;UBERON:0007135!1.47e-25!52;UBERON:0000955!6.38e-24!50;UBERON:0006238!6.38e-24!50;UBERON:0000033!1.41e-23!63;UBERON:0002346!1.54e-23!71;UBERON:0003075!1.54e-23!71;UBERON:0007284!1.54e-23!71;UBERON:0002616!3.18e-23!49;UBERON:0002020!5.13e-20!34;UBERON:0003056!2.81e-19!49;UBERON:0003080!5.52e-19!40;UBERON:0002780!2.12e-18!39;UBERON:0001890!2.12e-18!39;UBERON:0006240!2.12e-18!39;UBERON:0002791!1.61e-16!29;UBERON:0003528!1.61e-16!29;UBERON:0001893!1.61e-16!29;UBERON:0007811!2.04e-14!86;UBERON:0000153!2.25e-14!94;UBERON:0000956!1.70e-11!21;UBERON:0001869!1.70e-11!21;UBERON:0000203!1.70e-11!21;UBERON:0002619!7.75e-10!17;UBERON:0000025!2.78e-07!114;UBERON:0003076!4.01e-07!12;UBERON:0003057!4.01e-07!12;UBERON:0002021!4.72e-07!10;UBERON:0000411!4.72e-07!10;UBERON:0001950!4.72e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.85e-37,73;UBERON:0001016,2.88e-35,75;UBERON:0000073,3.58e-33,54;UBERON:0001049,2.51e-31,52;UBERON:0005068,2.51e-31,52;UBERON:0006241,2.51e-31,52;UBERON:0007135,2.51e-31,52;UBERON:0004121,3.91e-30,95;UBERON:0000924,3.91e-30,95;UBERON:0006601,3.91e-30,95;UBERON:0002346,1.17e-29,64;UBERON:0003075,1.17e-29,64;UBERON:0007284,1.17e-29,64;UBERON:0002020,4.43e-27,34;UBERON:0000955,1.80e-26,47;UBERON:0006238,1.80e-26,47;UBERON:0010371,9.89e-26,73;UBERON:0002616,1.49e-25,46;UBERON:0003080,5.59e-23,40;UBERON:0003528,3.09e-22,29;UBERON:0002791,3.09e-22,29;UBERON:0001893,3.09e-22,29;UBERON:0002780,3.46e-22,39;UBERON:0001890,3.46e-22,39;UBERON:0006240,3.46e-22,39;UBERON:0003056,7.40e-22,49;UBERON:0010314,2.48e-17,92;UBERON:0000956,2.76e-15,21;UBERON:0001869,2.76e-15,21;UBERON:0000203,2.76e-15,21;UBERON:0002619,5.39e-13,17;UBERON:0002021,3.72e-09,10;UBERON:0000411,3.72e-09,10;UBERON:0001950,3.72e-09,10;UBERON:0003076,1.21e-08,12;UBERON:0003057,1.21e-08,12;UBERON:0002420,3.91e-08,8;UBERON:0007245,3.91e-08,8;UBERON:0010009,3.91e-08,8;UBERON:0010011,3.91e-08,8;UBERON:0000454,3.91e-08,8;UBERON:0000025,1.12e-07,114;UBERON:0004111,1.62e-07,122;UBERON:0002240,8.78e-07,6;UBERON:0005174,8.78e-07,6;UBERON:0001137,8.78e-07,6 | |||
|phase1_expression=2.5623815536767,0,0,0,0,0.16787927191189,0.233612640595526,0.387369970324729,0.563154888606667,0.70219357896598,0.171217968225505,0.0797721589953364,0.171200729931206,0.262261207256992,0,0.202475267389826,0,0,0,0.42438965179803,2.89147186513637,0.0992909512008853,0,0.319984845586813,0.45881856213434,1.72269589234506,0,0.430942465371778,0,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0.523523743973798,0,0.683045484958446,1.45653105909346,0.377690453926732,0.811015449756117,0.367093504323363,3.12956537739216,0.65407546914134,4.17403747195497,2.91644848611425,1.67983705950435,4.31257693094915,0.167782606057736,0,0.672187598284928,0.257259436035947,0.286533439938757,0.515672092277442,8.49729135610311,12.6957835025288,9.50747105259269,0.338844532069132,4.4464739805557,0,0,0,2.09720077362883,3.45796474789399,2.07379224616955,2.70011876663381,2.52389953621658,20.5668708770739,21.6451170132581,2.44981598429908,5.46319184803947,1.83843757322004,12.1127469099328,11.7472351038373,10.752457327937,9.75958529203434,14.1805847583735,11.4600941522487,9.49222196604695,18.5711661310454,14.9742282821274,14.142172102736,17.5117167382897,10.8111678578674,0.530083353332288,0.982430281388212,0.869593466105033,0,0,0,0.649776417447669,0,0.842666520790511,0,0,0,2.53518155598025,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.68510327831436,0.517875767294343,0.445326417194474,0.346970653532272,0.608930956624282,1.38369298353635,0.452167921657868,0.940709657085638,0.628332956648377,2.22475470960936,0.578397427679647,0.884610551949874,0.323533699894818,0.220841518460394,0,0,7.02673912827713,8.58731497935166,0.255457055208591,0.11981512450592,0,0,10.3355541189328,15.0975198930147,12.942398267625,15.1227158567281,16.1100738118108,10.8049783170971,10.058958310201,0.81471491080253,0.497627882440372,0.758168275301024,0.631325567659422,0.780722657776222,1.37941262660084,1.26043490863744,0.753524089178575,2.38127747029647,1.40925092313335,1.96773621575431,1.03481348295606,0.646703978798527,0.945530400839096,0.879755620819744,0.876782929710299,1.66828349535359,0.696504333044333,0.411564272815887,0.796137067273973,0,0,0,0.414251545071004,0.938104239924385,0.180062061461015,1.65721314909647,0.590292695242212,0.308534225774757,0.930135779001631,0.804820204198858,0.583826711835847,0.329119699826961,0.32833492815819,0.243206428637567,0.438599962275997,0.219550115291051,0.268412837520744,11.3556572224629,5.24813523134351,0,0.264450566663544,0.639864751605702,1.16118335930219,1.67527699718721,1.4117846723634,0.889512175379481,0.760902504450237,0,0.164698954724011,0.502670417600539,0.397912944082302,0.974820435595601,0.898819408654221,0.864552199498777,0.398282546508734,0.379335801906163,0.456994050438915,0,0,0.775809948670503,1.19230893813542,0.632365371242573,0.442830443938806,0.470996183524124,0.493588655687202,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0.358794827043824,0.482443521363367,0.369506380333209,1.32643988239339,0.651859905768103,0.509235257325564,0.704070744865506,1.34005005953453,0.952174563544055,1.95133647857799,0.630540576424764,2.43611158613652,1.75400245523236,0.491589944147214,0.863424909329478,1.3018415272336,0,0,0.491764273019036,0.827810238914197,8.0275294993896,7.85318300167761,0.491804836130026,0.252470927204373,0.315508219416257,1.17131623288992,1.29254038639679,0.238968797952552,0.222798674082394,2.26461224631066,0.404810701674894,1.16902343164525,0.790575555893047,12.8528526568723,1.41940085208269,0.35613120733451,0.81443479676788,0.329940245945071,0,0,0.302323556964751,0.377210159511796,0.590603785761546,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,1.03135543248187,1.36175842301515,0.900305470156551,0.905510786479282,0.857348140126369,1.41872186913819,1.42695054081656,2.30368628842969,3.34911444026059,0,0.21183207086382,0,0.8244312647074,0.484393280087717,0.603129249281559,0.238744688006273,0,0,11.3109434226411,0.170870880797853,0.619160603889667,0.740778109478847,0,0.27338845544205,0.228778173206523,0.849892149969277,0.419854356970974,0.552799895217695,0,0.632671987162271,1.62655573701479,0.972048067396211,1.04544148007234,0.655087691238533,0.404593039154462,1.32245529160537,0.26175594198403,0.388844919875379,0,0,0.448549638131936,0.496375471371293,0.777804753376191,0.387479470433193,0.844780627453891,1.05621514781179,1.3020438484395,0.314578033277133,0,0.288030006257865,0.632022241256357,0.608175645870493,0.308132871494482,0,0.179026695667481,0.79472541912506,0.600977247599844,0.147689527174577,0.201932899896295,0.685861259894999,0.604957110821043,0.487289403698762,0.865906574762965,0.818138315270983,0.453460767230423,0.443971906748129,0.538283139656854,0.503653849092235,1.35232715822533,0.563047426353546,0.36630324853453,0,0,11.8597886949584,7.82552902062201,10.3121192419091,9.28007184655913,10.2762377965596,14.3524840504043,16.2005400055633,11.2580300806055,11.781702633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| 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| ||
|short_description=p3@Gabbr1 | |short_description=p3@Gabbr1 | ||
}} | }} |
Latest revision as of 11:30, 26 September 2015
Short description: | p3@Gabbr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gabbr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -63bp_to_ENSMUST00000174826_5end |
EntrezGene: | Gabbr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.69e-18 | 23 |
neuroblast (sensu Vertebrata) | 3.69e-18 | 23 |
ectodermal cell | 1.74e-16 | 44 |
neurectodermal cell | 1.74e-16 | 44 |
neural cell | 6.00e-16 | 43 |
neuron | 1.99e-14 | 33 |
neuronal stem cell | 1.99e-14 | 33 |
neuroblast | 1.99e-14 | 33 |
electrically signaling cell | 1.99e-14 | 33 |
electrically responsive cell | 1.42e-10 | 39 |
electrically active cell | 1.42e-10 | 39 |