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FFCP PHASE1:Mm9::chr17:37182925..37183025,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=54393
|EntrezGene=54393
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=G3UXR6,Q3TWR2
|UniProt=G3UXR6,Q3TWR2
|association_with_transcript=0bp_to_ENSMUST00000173823,ENSMUST00000174456_5end
|association_with_transcript=0bp_to_ENSMUST00000173823,ENSMUST00000174456_5end
|cluster_id=chr17:37182925..37183025,+
|description=CAGE_peak_1_at_Gabbr1_5end
|description=CAGE_peak_1_at_Gabbr1_5end
|id=chr17:37182925..37183025,+
|id=chr17:37182925..37183025,+
|ontology_enrichment_celltype=CL:0000117!3.90e-13!23;CL:0000337!3.90e-13!23;CL:0000540!5.47e-11!33;CL:0000047!5.47e-11!33;CL:0000031!5.47e-11!33;CL:0000404!5.47e-11!33;CL:0000221!5.97e-11!44;CL:0000133!5.97e-11!44;CL:0002319!6.54e-11!43;CL:0000393!1.45e-09!39;CL:0000211!1.45e-09!39;CL:0000055!2.97e-09!50
|ontology_enrichment_celltype=CL:0000117!3.90e-13!23;CL:0000337!3.90e-13!23;CL:0000540!5.47e-11!33;CL:0000047!5.47e-11!33;CL:0000031!5.47e-11!33;CL:0000404!5.47e-11!33;CL:0000221!5.97e-11!44;CL:0000133!5.97e-11!44;CL:0002319!6.54e-11!43;CL:0000393!1.45e-09!39;CL:0000211!1.45e-09!39;CL:0000055!2.97e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.89e-13,23;CL:0000337,3.89e-13,23;CL:0000540,5.47e-11,33;CL:0000047,5.47e-11,33;CL:0000031,5.47e-11,33;CL:0000404,5.47e-11,33;CL:0000221,5.96e-11,44;CL:0000133,5.96e-11,44;CL:0002319,6.54e-11,43;CL:0000393,1.45e-09,39;CL:0000211,1.45e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.99e-29!73;UBERON:0005743!5.99e-29!73;UBERON:0000073!2.26e-27!75;UBERON:0001016!2.26e-27!75;UBERON:0001049!3.67e-26!52;UBERON:0005068!3.67e-26!52;UBERON:0006241!3.67e-26!52;UBERON:0007135!3.67e-26!52;UBERON:0004121!1.78e-25!102;UBERON:0000924!1.78e-25!102;UBERON:0006601!1.78e-25!102;UBERON:0000033!1.90e-25!63;UBERON:0000955!2.71e-25!50;UBERON:0006238!2.71e-25!50;UBERON:0002346!3.86e-25!71;UBERON:0003075!3.86e-25!71;UBERON:0007284!3.86e-25!71;UBERON:0002616!1.20e-24!49;UBERON:0003056!1.93e-21!49;UBERON:0000153!1.68e-20!94;UBERON:0007811!3.08e-20!86;UBERON:0003080!6.98e-20!40;UBERON:0002020!2.05e-19!34;UBERON:0002780!3.88e-19!39;UBERON:0001890!3.88e-19!39;UBERON:0006240!3.88e-19!39;UBERON:0002791!9.28e-17!29;UBERON:0003528!9.28e-17!29;UBERON:0001893!9.28e-17!29;UBERON:0000956!6.20e-12!21;UBERON:0001869!6.20e-12!21;UBERON:0000203!6.20e-12!21;UBERON:0002619!5.68e-10!17;UBERON:0000025!4.93e-07!114;UBERON:0002021!7.29e-07!10;UBERON:0000411!7.29e-07!10;UBERON:0001950!7.29e-07!10;UBERON:0003076!8.25e-07!12;UBERON:0003057!8.25e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.97e-29,73;UBERON:0000073,1.46e-27,54;UBERON:0001016,2.25e-27,75;UBERON:0002346,4.68e-27,64;UBERON:0003075,4.68e-27,64;UBERON:0007284,4.68e-27,64;UBERON:0004121,1.49e-26,95;UBERON:0000924,1.49e-26,95;UBERON:0006601,1.49e-26,95;UBERON:0001049,3.66e-26,52;UBERON:0005068,3.66e-26,52;UBERON:0006241,3.66e-26,52;UBERON:0007135,3.66e-26,52;UBERON:0010371,3.47e-24,73;UBERON:0000955,3.23e-23,47;UBERON:0006238,3.23e-23,47;UBERON:0002616,1.39e-22,46;UBERON:0003056,1.93e-21,49;UBERON:0003080,6.97e-20,40;UBERON:0002020,2.05e-19,34;UBERON:0002780,3.87e-19,39;UBERON:0001890,3.87e-19,39;UBERON:0006240,3.87e-19,39;UBERON:0010314,6.35e-18,92;UBERON:0003528,9.26e-17,29;UBERON:0002791,9.26e-17,29;UBERON:0001893,9.26e-17,29;UBERON:0000956,6.20e-12,21;UBERON:0001869,6.20e-12,21;UBERON:0000203,6.20e-12,21;UBERON:0002619,5.67e-10,17;UBERON:0000025,4.78e-07,114;UBERON:0002021,7.29e-07,10;UBERON:0000411,7.29e-07,10;UBERON:0001950,7.29e-07,10;UBERON:0003076,8.25e-07,12;UBERON:0003057,8.25e-07,12
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.21339313086926,0,22.8760315447288,18.2004339502807,26.0564592381024,15.7574984642832,26.5261117020522,31.3343827184163,19.1400445720607,14.156011497471,2.89900944991207,5.76060012515731,42.0294790435477,9.12263468805739,10.4765176308124,6.62596197186755,8.23522800070415,15.2984643181574,17.5485356299155,15.359710826156,18.9816925902518,20.88066502347,22.1817607301049,37.5212840848047,35.8870169318429,52.4777290795245,16.3245876202952,5.10567692760349,5.74168682300644,2.18250001273302,33.4217997675689,20.64507229963,20.8792851664682,10.9327873330324,13.0408747049194,144.011719867352,104.493828687129,109.995938580364,117.375723540739,103.447460485367,114.819872403234,98.5532850338437,122.937688480212,101.050757203478,135.135441367225,9.23707393499172,31.5229649986815,35.1711227853516,32.0900866530148,16.7690530102386,18.9358813703515,31.781282075631,34.6138896161342,34.3383554263242,30.8290598351833,30.1640366869385,33.7641151081076,28.3733767633744,35.0217583654635,30.7854113602087,29.5302088595506,36.2717940207398,31.2512937151202,27.6097553538215,26.2014077839227,28.4581479479895,33.3654515579554,33.6195027825723,31.394825992583,27.4799390812765,31.5612487435953,29.6343316053892,25.7808317209086,27.5682351107099,37.0353899294107,30.8451047122853,31.1274164306781,24.1446315470117,28.5083787782177,28.1643652032466,46.21495691852,29.4753826641215,33.9496265396311,40.7444147306636,19.8532277207564,16.4626163290499
|phase1_expression=26.9050063136054,3.48975407639361,4.54999239389536,0.30246421130683,0,9.9048770428015,10.2789561862031,22.7257049257174,13.7972947708633,14.2779361056416,5.65019295144166,8.53562101250099,15.2368649638773,19.5821701418554,5.3297561890506,5.4668322195253,3.49780939064073,7.09789872056035,9.59801035240171,6.36584477697045,37.0788745058664,5.26242041364692,3.91799683708403,6.23970448894286,5.96464130774642,1.14846392823004,5.59990595006797,5.17130958446134,1.52018735565099,2.77233142735924,3.54768817048488,0,0,0,2.3108129580102,0.997407872150954,2.45003227514843,20.9265815368454,8.5946887897618,15.1821885752402,42.940898626264,39.6166381275899,38.3553178894611,17.4996576986052,19.5657477253663,21.6585167550784,21.1245662973971,36.4102011155346,45.6947260087701,46.0798860806052,19.8780718708015,25.8754615856949,10.5703041816374,20.3101399763176,38.3146931022409,17.2363822144084,15.1862723167541,20.6268836910977,105.60919256871,92.5734213726058,104.58218157852,18.2976047317331,12.450127145556,1.7997994345628,2.96659908770092,2.8419204597844,28.16241038873,37.2691756161908,54.9554945234932,65.0728622758749,56.7877395648731,111.689534901887,94.5317355272906,53.1610068592901,59.999264857416,68.9414089957516,136.543692439242,126.665839380506,136.863421131313,105.904689047346,111.61492519494,100.015367146898,146.012708477722,157.57353080887,128.197729884744,73.6571463684169,76.026477546721,112.585265278482,6.05809546665472,14.2074533000757,15.3628179011889,7.74381489283248,0,0,1.29955283489534,1.34408066129201,13.7635531729117,10.7371103224176,8.57293815189467,9.54016851177919,26.4785629180159,19.2489716121477,71.3454671178608,106.660005473,3.030874574157,3.80039798212648,0.505524445014783,13.245330047411,21.2329064590681,20.7818994690755,18.7364152907427,21.0081180035377,15.681853813412,20.0461111934988,31.0434186838261,11.3099932196708,36.5848552246873,14.1707369781513,14.153768831198,17.6325866442676,10.1587098491781,12.6067565815158,5.59175283654366,125.310181120942,107.865054008929,6.38642638021478,2.03685711660064,0.599902730993408,1.01656181658452,182.744580073884,164.700217014706,105.926618831145,177.996103876891,169.795063667339,158.750066043504,134.173524557036,31.4683634297477,12.4406970610093,6.06534620240819,17.2562321826909,21.9903548606969,31.4965883073858,28.9900028986612,38.5804333659431,45.3123084347843,38.1778886448852,39.5421277642056,42.9447595426766,15.5208954911646,30.0678667466833,27.9762287420679,23.0155519048954,26.970583174883,27.8601733217733,22.8418171412817,29.6561057559555,0.702213187313235,0.257347907114715,0,14.9130556225561,18.0585066185444,14.5850269783422,19.6498130535725,13.3799677588235,12.649903256765,12.0917651270212,9.65784245038629,15.179494507732,12.5065485934245,14.2825693748813,17.1865876237214,12.2807989437279,13.8316572633362,16.1047702512446,154.352822246069,100.949424744078,3.96502539580558,6.61126416658861,25.1680135631576,22.5269571704625,23.8404803445873,20.7734030362043,16.0112191568307,13.8864707062168,10.4396393539793,11.3642278759568,14.5774421104156,17.7071260116624,19.496408711912,11.6846523125049,6.26800344636613,9.35963984295526,16.311439481965,16.4517858158009,23.6686244913469,20.5687841123767,23.4682509472827,28.8959577948112,24.4725398670876,19.0417090893687,14.6008816892479,14.1906738510071,3.85388415213294,5.5058884886311,5.30709286805648,2.24862112384854,2.43432145666204,3.85883455603867,5.0925170356284,8.0554918486227,4.53978634970099,3.84385978463314,23.0029130443767,10.0478055870496,7.17686648163489,4.2938409251009,2.87035861635059,4.82443521363367,26.9739657643243,17.2437184711141,16.9483575499707,19.860175035697,21.8261930908307,30.4861388544105,28.5652369063216,41.1731996979955,31.6846639653444,37.8704619299405,42.7338780002065,31.1340297959902,20.8948828057734,30.0870041849544,0,0,7.86822836830458,10.7615331058846,143.692778039074,148.155571852545,24.5902418065013,15.1482556322624,16.4064274096453,17.5697434933487,27.7896183075311,15.7719406648684,18.0466926006739,28.3076530788832,17.4068601720205,32.1481443702443,25.693705566524,114.390388646163,26.2589157635297,25.819512531752,29.971200521058,37.1182776688205,9.2921596837974,10.4395673546642,9.37203026590728,8.29862350925952,10.9261700365886,14.1420168054207,16.5394107627662,13.4507479906677,14.6163925137736,11.0612865277536,5.27093042874994,4.12542172992747,29.6182457005796,29.7100805151662,31.5635188429921,21.4337035031592,28.1970971491215,32.819862438781,42.9472943771536,46.5831372145337,9.38686832254841,6.56679419677843,10.3648347085832,32.3177055765301,25.3499149912572,16.5860543552429,11.8178620563105,16.2499490747611,13.1166376483433,137.956424695819,10.7648654902647,13.8279201535359,17.0378965180135,6.96963290917357,6.83471138605126,8.23601423543482,14.9581018394593,14.8348539463077,15.0637971446822,21.9574242143476,20.2455035891927,21.3485440483191,18.5769186213498,23.8360657456494,17.9057302271866,21.1737023824169,25.8705316420301,13.6113089831695,14.387262035389,6.21339313086926,0,22.8760315447288,18.2004339502807,26.0564592381024,15.7574984642832,26.5261117020522,31.3343827184163,19.1400445720607,14.156011497471,2.89900944991207,5.76060012515731,42.0294790435477,9.12263468805739,10.4765176308124,6.62596197186755,8.23522800070415,15.2984643181574,17.5485356299155,15.359710826156,18.9816925902518,20.88066502347,22.1817607301049,37.5212840848047,35.8870169318429,52.4777290795245,16.3245876202952,5.10567692760349,5.74168682300644,2.18250001273302,33.4217997675689,20.64507229963,20.8792851664682,10.9327873330324,13.0408747049194,144.011719867352,104.493828687129,109.995938580364,117.375723540739,103.447460485367,114.819872403234,98.5532850338437,122.937688480212,101.050757203478,135.135441367225,9.23707393499172,31.5229649986815,35.1711227853516,32.0900866530148,16.7690530102386,18.9358813703515,31.781282075631,34.6138896161342,34.3383554263242,30.8290598351833,30.1640366869385,33.7641151081076,28.3733767633744,35.0217583654635,30.7854113602087,29.5302088595506,36.2717940207398,31.2512937151202,27.6097553538215,26.2014077839227,28.4581479479895,33.3654515579554,33.6195027825723,31.394825992583,27.4799390812765,31.5612487435953,29.6343316053892,25.7808317209086,27.5682351107099,37.0353899294107,30.8451047122853,31.1274164306781,24.1446315470117,28.5083787782177,28.1643652032466,46.21495691852,29.4753826641215,33.9496265396311,40.7444147306636,19.8532277207564,16.4626163290499
|short_description=p1@Gabbr1
|short_description=p1@Gabbr1
}}
}}

Latest revision as of 11:30, 26 September 2015

Short description:p1@Gabbr1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gabbr1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000173823, ENSMUST00000174456_5end
EntrezGene:Gabbr1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gabbr1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G726.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.28
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E922.73
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E713.80
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.65
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.54
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E415.24
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E819.58
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.47
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.60
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A337.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.96
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I15.60
GP2+ M cell, pool3.CNhs13240.11847-124I25.17
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G820.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H315.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G942.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H239.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H438.36
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D817.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D919.57
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B321.66
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B721.12
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C236.41
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B845.69
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C346.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C419.88
Mouse Astrocytes, donor3.CNhs12107.11633-122C425.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.57
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I920.31
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A138.31
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C117.24
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E115.19
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C520.63
Mouse Granule cells, donor1.CNhs12131.11713-123C3105.61
Mouse Granule cells, donor2.CNhs12357.11731-123E392.57
Mouse Granule cells, donor3.CNhs12108.11636-122C7104.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C618.30
Mouse Meningeal cells, donor3.CNhs12109.11639-122D112.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C828.16
Mouse Microglia, donor2.CNhs12634.11736-123E837.27
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D554.96
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F565.07
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D956.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1111.69
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D594.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D253.16
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F260.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D668.94
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3136.54
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3126.67
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7136.86
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4105.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4111.61
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8100.02
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4146.01
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5157.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6128.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D673.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F676.03
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1112.59
Mouse Schwann, donor1.CNhs12507.11728-123D96.06
Mouse Schwann, donor2.CNhs12573.11746-123F914.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.36
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.57
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.54
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G626.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I871.35
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6106.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.25
accessory axillary lymph node, adult.CNhs10475.1063-29H921.23
adrenal gland, adult.CNhs10508.49-24D720.78
adrenal gland, embryo E14.CNhs11038.406-44C518.74
adrenal gland, embryo E16.CNhs11004.1254-43D621.01
adrenal gland, embryo E17.CNhs11043.1263-45I115.68
adrenal gland, embryo E18.CNhs11026.1262-18F520.05
adrenal gland, neonate N00.CNhs11191.1311-23C131.04
adrenal gland, neonate N25.CNhs11223.1377-27I311.31
amnion, adult pregnant day17.5.CNhs10488.583-22A836.58
aorta, adult.CNhs10498.46-23H114.17
bone (os femoris), adult.CNhs10483.56-12G214.15
bone (os femoris), neonate N02.CNhs11227.1985-43F517.63
bone (os femoris), neonate N16.CNhs11225.1525-43A610.16
bone (os femoris), neonate N20.CNhs11195.1350-25C312.61
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B2125.31
cerebellum, neonate N30.CNhs11135.1395-42I2107.87
colon, adult.CNhs10468.36-18H76.39
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A4182.74
corpus striatum, adult.CNhs10487.19-21D8164.70
corpus striatum, neonate N00.CNhs11226.630-43F1105.93
cortex, adult.CNhs10473.12-14D5178.00
cortex, neonate N30.CNhs11107.1392-42F2169.80
diencephalon, adult.CNhs10482.20-12F2158.75
diencephalon, neonate N30.CNhs11201.1388-42B2134.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B131.47
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.44
epididymis, adult.CNhs10490.58-23B26.07
eyeball, adult.CNhs10484.31-12G417.26
eyeball, embryo E12.CNhs11016.345-16C621.99
eyeball, embryo E14.CNhs10521.399-16E231.50
eyeball, embryo E15.CNhs10593.426-16C928.99
eyeball, embryo E17.CNhs11023.1261-18D438.58
eyeball, neonate N00.CNhs11207.633-15C645.31
eyeball, neonate N01.CNhs11140.1532-43E738.18
eyeball, neonate N02.CNhs11205.1551-44G839.54
eyeball, neonate N16.CNhs11188.777-19A242.94
forelimb, embryo E11.CNhs10596.335-25E215.52
forelimb, embryo E12.CNhs10600.359-14H230.07
forelimb, embryo E13.CNhs10589.384-1E227.98
forelimb, embryo E14.CNhs10577.413-26A823.02
forelimb, embryo E15.CNhs11007.437-20E726.97
forelimb, embryo E17.CNhs10598.1517-43C427.86
forelimb, embryo E18.CNhs11008.1520-43B522.84
gonad, embryo E13.CNhs11044.1564-45I629.66
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E914.91
heart, embryo E12.CNhs11015.353-12F518.06
heart, embryo E13.CNhs11013.376-3I914.59
heart, embryo E14.CNhs10597.403-26D419.65
heart, embryo E15.CNhs11017.431-16C813.38
heart, embryo E16.CNhs11021.457-17C612.65
heart, embryo E17.CNhs11025.479-18E512.09
heart, embryo E18.CNhs11030.1283-20G39.66
heart, neonate N00.CNhs11213.639-21E315.18
heart, neonate N03.CNhs11221.1349-25I212.51
heart, neonate N10.CNhs11118.749-24G114.28
heart, neonate N16.CNhs11209.782-15G117.19
heart, neonate N20.CNhs11127.821-26I612.28
heart, neonate N25.CNhs11196.1351-25D313.83
heart, neonate N30.CNhs11202.1390-42D216.10
hippocampus, adult.CNhs10478.13-16E8154.35
hippocampus, neonate N00.CNhs11228.627-43G1100.95
intestinal mucosa, adult.CNhs10506.860-29I33.97
intestine, adult.CNhs10496.178-9A36.61
intestine, embryo E12.CNhs11019.1251-16I525.17
intestine, embryo E13.CNhs11010.381-16D522.53
intestine, embryo E15.CNhs10602.976-16D823.84
intestine, embryo E16.CNhs10585.463-22H420.77
intestine, embryo E17.CNhs10582.482-18D316.01
intestine, embryo E18.CNhs10526.1289-20F713.89
intestine, neonate N00.CNhs11126.644-26D110.44
intestine, neonate N01.CNhs11192.1322-23E911.36
intestine, neonate N06.CNhs11102.688-20B814.58
intestine, neonate N07.CNhs11095.720-20F217.71
intestine, neonate N10.CNhs11098.755-23A519.50
intestine, neonate N20.CNhs11187.827-18D111.68
intestine, neonate N25.CNhs11121.1352-25E36.27
intestine, neonate N30.CNhs11131.1384-42G19.36
kidney, embryo E14.CNhs10606.411-4I916.31
kidney, embryo E15.CNhs10997.434-16F816.45
kidney, embryo E16.CNhs10584.464-22A523.67
kidney, embryo E17.CNhs11028.483-18I220.57
kidney, embryo E18.CNhs11001.1288-20C723.47
kidney, neonate N00.CNhs11214.646-21G728.90
kidney, neonate N10.CNhs11206.758-6D524.47
kidney, neonate N20.CNhs11113.832-19I119.04
kidney, neonate N25.CNhs11122.1353-25F314.60
kidney, neonate N30.CNhs11203.1385-42H114.19
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F85.51
liver, embryo E13.CNhs10524.378-3H65.31
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F53.86
liver, embryo E17.CNhs10510.481-18A35.09
liver, embryo E18.CNhs10579.499-43G48.06
liver, neonate N00.CNhs11117.641-24F44.54
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A823.00
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B97.18
liver, neonate N20.CNhs11220.823-25A34.29
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B126.97
lung, embryo E12.CNhs10522.354-16G217.24
lung, embryo E14.CNhs10604.404-26F816.95
lung, embryo E15.CNhs11020.432-17C519.86
lung, embryo E16.CNhs10998.458-17B621.83
lung, embryo E17.CNhs10605.480-44A630.49
lung, embryo E18.CNhs10583.1287-20I628.57
lung, neonate N00.CNhs11224.640-42C641.17
lung, neonate N06.CNhs11212.683-20E531.68
lung, neonate N07.CNhs11111.715-19A337.87
lung, neonate N10.CNhs11219.750-23E642.73
lung, neonate N20.CNhs11109.822-18A431.13
lung, neonate N25.CNhs11119.1359-25C720.89
lung, neonate N30.CNhs11133.1394-42H230.09
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B67.87
mammary gland, adult pregnant day19.CNhs10476.588-5H210.76
medulla oblongata, adult.CNhs10477.17-12C2143.69
medulla oblongata, neonate N30.CNhs11200.1396-42A3148.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C724.59
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C215.15
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.41
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E217.57
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E327.79
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.77
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D818.05
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D928.31
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.41
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D532.15
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D625.69
olfactory brain, adult.CNhs10489.18-22I9114.39
ovary, adult.CNhs10507.91-2I726.26
ovary, embryo E18.CNhs11040.505-44H725.82
ovary, neonate N00.CNhs11217.1299-22I429.97
oviduct, adult pregnant day01.CNhs10500.988-6G637.12
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F410.44
pancreas, embryo E15.CNhs11042.1556-45F29.37
pancreas, embryo E16.CNhs11003.460-26E58.30
pancreas, embryo E17.CNhs10599.1558-45G310.93
pancreas, embryo E18.CNhs10580.1535-43I714.14
pancreas, neonate N00.CNhs11105.645-26G916.54
pancreas, neonate N01.CNhs11138.1531-43D713.45
pancreas, neonate N02.CNhs11139.1539-43D814.62
pancreas, neonate N16.CNhs11136.787-43B611.06
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G829.62
pituitary gland, embryo E12.CNhs11018.346-16E629.71
pituitary gland, embryo E13.CNhs11009.370-44C731.56
pituitary gland, embryo E14.CNhs11037.398-44A521.43
pituitary gland, embryo E15.CNhs10592.427-16B928.20
pituitary gland, embryo E16.CNhs11036.449-43F632.82
pituitary gland, embryo E17.CNhs11039.1265-44F542.95
pituitary gland, neonate N00.CNhs11190.1308-22E946.58
placenta, adult pregnant day10.CNhs10472.539-13I79.39
placenta, adult pregnant day17.CNhs10464.577-18G36.57
prostate, adult.CNhs10470.859-1F810.36
skin, adult.CNhs10492.30-1C332.32
skin, neonate N00.CNhs11124.650-25G425.35
skin, neonate N03.CNhs11215.662-22H316.59
skin, neonate N06.CNhs11097.693-20I511.82
skin, neonate N10.CNhs11108.762-6C416.25
small intestine, neonate N16.CNhs11114.790-21I113.12
spinal cord, adult.CNhs10505.24-13C9137.96
spleen, adult.CNhs10465.25-2G210.76
spleen, embryo E16.CNhs11035.461-43C113.83
spleen, embryo E18.CNhs11011.1271-21F217.04
spleen, neonate N10.CNhs11116.752-24D16.97
spleen, neonate N20.CNhs11112.824-19H16.83
spleen, neonate N25.CNhs11099.1354-25G38.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C914.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D315.06
stomach, adult.CNhs10503.33-1H621.96
stomach, embryo E12.CNhs10588.356-43E320.25
stomach, embryo E15.CNhs10603.1252-16G821.35
stomach, embryo E16.CNhs11022.459-17D418.58
stomach, embryo E17.CNhs11006.1035-18D523.84
stomach, embryo E18.CNhs10999.1286-20C617.91
stomach, neonate N03.CNhs11193.1340-24B821.17
stomach, neonate N07.CNhs11210.718-18A925.87
stomach, neonate N25.CNhs11104.1355-25E413.61
stomach, neonate N30.CNhs11134.1386-42I114.39
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F522.88
testis, embryo E15.CNhs11034.443-27C518.20
testis, embryo E16.CNhs11033.470-26G526.06
testis, embryo E17.CNhs11029.486-18I515.76
testis, embryo E18.CNhs11027.503-18G526.53
testis, neonate N00.CNhs11189.1300-22B731.33
testis, neonate N07.CNhs11222.726-26I419.14
testis, neonate N10.CNhs11204.763-44D914.16
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B542.03
thymus, embryo E14.CNhs11041.402-44I49.12
thymus, embryo E15.CNhs11005.430-45I210.48
thymus, embryo E16.CNhs11002.456-26C56.63
thymus, embryo E17.CNhs10581.478-18C18.24
thymus, embryo E18.CNhs10595.1273-19G415.30
thymus, neonate N02.CNhs11181.1541-43F817.55
thymus, neonate N03.CNhs11137.2104-43C715.36
thymus, neonate N06.CNhs11197.681-26C418.98
thymus, neonate N07.CNhs11211.713-19D320.88
thymus, neonate N10.CNhs11194.748-24E422.18
thymus, neonate N20.CNhs11186.820-7A237.52
thymus, neonate N25.CNhs11125.1362-25G735.89
thymus, neonate N30.CNhs11132.1393-42G252.48
tongue, adult.CNhs10499.32-1B416.32
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.74
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E433.42
uterus, adult pregnant day19.CNhs10497.590-15F520.65
uterus, adult.CNhs10509.92-27E520.88
vagina, adult.CNhs10502.89-27D510.93
vesicular gland, adult.CNhs10491.51-27F813.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1144.01
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2104.49
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3110.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7117.38
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4103.45
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5114.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A698.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7122.94
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8101.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9135.14
whole body, embryo E11.CNhs11014.324-5I89.24
whole body, embryo E12.CNhs10587.857-27C931.52
whole body, embryo E13.CNhs10512.372-23H235.17
whole body, embryo E14.5.CNhs10578.420-27D232.09
whole body, embryo E14.CNhs10519.395-14B116.77
whole body, embryo E16.CNhs10514.453-14F218.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G531.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G534.61
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G534.34
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G530.83
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G530.16
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G533.76
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G528.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G535.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G530.79
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G529.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G536.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G531.25
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G527.61
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G526.20
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G528.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G533.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G533.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G531.39
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G527.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G531.56
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G529.63
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G525.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G527.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G537.04
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G530.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G531.13
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G524.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G528.51
whole body, embryo E17.5.CNhs10513.490-9F928.16
whole body, embryo E17.CNhs10517.475-3I546.21
whole body, embryo E18.CNhs10516.493-3B329.48
whole body, neonate N00.CNhs10525.657-19C233.95
whole body, neonate N01.CNhs10576.659-23C640.74
whole body, neonate N06.CNhs10515.692-21D119.85
whole body, neonate N10.CNhs10518.761-6B416.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.89e-1323
neuroblast (sensu Vertebrata)3.89e-1323
neuron5.47e-1133
neuronal stem cell5.47e-1133
neuroblast5.47e-1133
electrically signaling cell5.47e-1133
ectodermal cell5.96e-1144
neurectodermal cell5.96e-1144
neural cell6.54e-1143
electrically responsive cell1.45e-0939
electrically active cell1.45e-0939

Uber anatomy
Ontology termp-valuen
central nervous system5.97e-2973
regional part of nervous system1.46e-2754
nervous system2.25e-2775
neurectoderm4.68e-2764
neural plate4.68e-2764
presumptive neural plate4.68e-2764
ectoderm-derived structure1.49e-2695
ectoderm1.49e-2695
presumptive ectoderm1.49e-2695
neural tube3.66e-2652
neural rod3.66e-2652
future spinal cord3.66e-2652
neural keel3.66e-2652
ecto-epithelium3.47e-2473
brain3.23e-2347
future brain3.23e-2347
regional part of brain1.39e-2246
pre-chordal neural plate1.93e-2149
anterior neural tube6.97e-2040
gray matter2.05e-1934
regional part of forebrain3.87e-1939
forebrain3.87e-1939
future forebrain3.87e-1939
structure with developmental contribution from neural crest6.35e-1892
brain grey matter9.26e-1729
regional part of telencephalon9.26e-1729
telencephalon9.26e-1729
cerebral cortex6.20e-1221
cerebral hemisphere6.20e-1221
pallium6.20e-1221
regional part of cerebral cortex5.67e-1017
tube4.78e-07114
occipital lobe7.29e-0710
visual cortex7.29e-0710
neocortex7.29e-0710
posterior neural tube8.25e-0712
chordal neural plate8.25e-0712
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