FFCP PHASE1:Mm9::chr6:112897240..112897271,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=259302|HGNC=|MCL_coexpression_id=1655|UniProt=F8VPQ4,Q812A2,Q91Z68|association_with_transcript=0bp_to_ENSMUST00000060215,ENSMUST00000088373,NM_080448,uc009deh.1,uc009dei.1,uc009dej.1_5end|description=CAGE_peak_1_at_Srgap3_5end|id=chr6:112897240..112897271,-|ontology_enrichment_celltype=CL:0000221!7.11e-12!44;CL:0000133!7.11e-12!44;CL:0000540!8.73e-12!33;CL:0000047!8.73e-12!33;CL:0000031!8.73e-12!33;CL:0000404!8.73e-12!33;CL:0002319!1.70e-11!43;CL:0000117!1.96e-11!23;CL:0000337!1.96e-11!23;CL:0000393!5.88e-10!39;CL:0000211!5.88e-10!39;CL:0000055!2.88e-09!50|ontology_enrichment_celltype_v019_2=CL:0000221,6.90e-12,44;CL:0000133,6.90e-12,44;CL:0000540,8.46e-12,33;CL:0000047,8.46e-12,33;CL:0000031,8.46e-12,33;CL:0000404,8.46e-12,33;CL:0002319,1.65e-11,43;CL:0000117,1.90e-11,23;CL:0000337,1.90e-11,23;CL:0000393,5.73e-10,39;CL:0000211,5.73e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.25e-32!102;UBERON:0000924!3.25e-32!102;UBERON:0006601!3.25e-32!102;UBERON:0001017!3.36e-31!73;UBERON:0005743!3.36e-31!73;UBERON:0000033!2.16e-30!63;UBERON:0000073!3.13e-30!75;UBERON:0001016!3.13e-30!75;UBERON:0002346!9.74e-29!71;UBERON:0003075!9.74e-29!71;UBERON:0007284!9.74e-29!71;UBERON:0001049!5.38e-26!52;UBERON:0005068!5.38e-26!52;UBERON:0006241!5.38e-26!52;UBERON:0007135!5.38e-26!52;UBERON:0003056!8.22e-26!49;UBERON:0000955!2.87e-25!50;UBERON:0006238!2.87e-25!50;UBERON:0002616!1.47e-24!49;UBERON:0003080!9.15e-21!40;UBERON:0002780!4.15e-20!39;UBERON:0001890!4.15e-20!39;UBERON:0006240!4.15e-20!39;UBERON:0002020!6.96e-18!34;UBERON:0007811!1.84e-16!86;UBERON:0000153!2.84e-16!94;UBERON:0002791!8.92e-16!29;UBERON:0003528!8.92e-16!29;UBERON:0001893!8.92e-16!29;UBERON:0000956!8.83e-12!21;UBERON:0001869!8.83e-12!21;UBERON:0000203!8.83e-12!21;UBERON:0002619!6.14e-10!17;UBERON:0002021!3.58e-07!10;UBERON:0000411!3.58e-07!10;UBERON:0001950!3.58e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.87e-34,95;UBERON:0000924,3.87e-34,95;UBERON:0006601,3.87e-34,95;UBERON:0002346,1.54e-31,64;UBERON:0003075,1.54e-31,64;UBERON:0007284,1.54e-31,64;UBERON:0001017,3.07e-31,73;UBERON:0010371,1.97e-30,73;UBERON:0001016,2.87e-30,75;UBERON:0000073,5.82e-27,54;UBERON:0001049,5.00e-26,52;UBERON:0005068,5.00e-26,52;UBERON:0006241,5.00e-26,52;UBERON:0007135,5.00e-26,52;UBERON:0003056,7.65e-26,49;UBERON:0000955,1.06e-23,47;UBERON:0006238,1.06e-23,47;UBERON:0002616,5.31e-23,46;UBERON:0003080,8.64e-21,40;UBERON:0002780,3.93e-20,39;UBERON:0001890,3.93e-20,39;UBERON:0006240,3.93e-20,39;UBERON:0002020,6.63e-18,34;UBERON:0010314,4.58e-16,92;UBERON:0003528,8.55e-16,29;UBERON:0002791,8.55e-16,29;UBERON:0001893,8.55e-16,29;UBERON:0000956,8.56e-12,21;UBERON:0001869,8.56e-12,21;UBERON:0000203,8.56e-12,21;UBERON:0002619,5.99e-10,17;UBERON:0002021,3.52e-07,10;UBERON:0000411,3.52e-07,10;UBERON:0001950,3.52e-07,10|phase1_expression=21.1396478178328,0,0,0,0,0.503637815735669,0.233612640595526,0,0.140788722151667,0,3.76679530096111,2.07407613387875,0,0,1.66554880907831,1.01237633694913,0.699561878128147,2.05050407482854,1.91960207048034,1.69755860719212,26.5335065271338,7.94327609607082,1.30599894569468,0.639969691173627,0.22940928106717,0,0,0.215471232685889,0.950117097281869,1.00812051903972,0.443461021310609,0,0,0,0.577703239502549,0.332469290716985,1.22501613757421,0,0,1.57057123192139,0,0,0,19.8916972401412,20.2753862439029,13.2153661556411,3.9119567217402,18.532138292338,20.2111288115714,35.9695313287424,14.5585878490377,30.188038516644,0.838913030288682,0,0.672187598284928,4.63066984864705,2.0057340795713,1.03134418455488,72.2269765268764,51.8411159686592,50.0726808769882,7.45457970552091,3.55717918444456,0,1.97773272513395,0.7104801149461,10.4860038681442,21.1320067926855,44.7939125172623,38.3416864862001,40.172067618114,38.8485338789173,32.6885440608388,35.3998409731217,41.8844708349693,42.284064184061,46.2486700197433,47.1166277534343,51.4581886408416,69.2403010583518,62.303085293241,61.9886910962544,43.8317308432168,42.207195752376,59.2857201374023,39.1856018679978,53.5317519804627,46.0406631188492,4.31639301999149,9.52201657345497,3.18850937571846,0,0,1.07940638327563,0.649776417447669,0,6.03911006566533,20.2812083867889,12.2099422163348,8.48014978824817,38.0277233397037,15.3991772897181,28.028576367731,14.2213340630666,4.32982082022428,3.80039798212648,2.52762222507392,6.73684890342454,12.9468941823586,6.82833839698194,14.7462527751215,7.30717147949139,7.61031140944993,11.0027527603414,11.5236932992991,4.77533047052767,8.40462890296871,3.32578520915797,6.19227386364912,15.0443170451091,8.17113618303456,8.727754556434,14.9113408974498,132.629701046231,130.485298344783,3.32094171771169,11.2626217035565,5.39912457894067,7.49714339731082,78.1907137693175,57.6450759551469,42.596825366261,109.856970361519,101.774752017472,60.2585329222724,76.2533936418461,5.09196819251581,11.3210343255185,4.0435641349388,28.1992086887875,33.9614356132657,33.3358051428536,55.6391981098529,100.972227949929,129.337384886674,130.291653529692,87.7048141879062,42.1686494304596,6.03590380211958,11.7245769704048,13.3722854364601,8.76782929710299,16.9608822027615,12.8853301613202,17.2856994582672,14.7285357445685,1.40442637462647,1.80143534980301,1.42081749697796,1.65700618028402,1.40715635988658,1.98068267607116,4.49814997611899,1.57411385397923,2.46827380619805,0.930135779001631,1.60964040839772,2.10177616260905,2.63295759861569,3.2833492815819,2.43206428637567,2.19299981137998,2.41505126820156,1.07365135008297,144.048614766427,76.2523177730498,2.31293148088659,2.3800550999719,7.46508876873319,8.59275685883622,12.371276286921,9.88249270654378,6.22658522765637,5.89699440948933,2.84717436926707,3.29397909448022,4.77536896720512,4.97391180102877,6.43381487493096,1.79763881730844,4.53889904736858,3.98282546508734,5.69003702859245,12.5673363870702,11.270773567308,10.7935203758017,9.50367187121366,11.221731182451,12.9634901104727,16.5323365737154,14.7578804170892,11.9695249004147,0.296452627087149,2.50267658574141,3.34150291692445,1.57403478669398,1.42002084971952,2.41177159752417,1.52775511068852,1.43848068725405,2.2698931748505,1.09824565275233,2.87536413054709,0.744281895337007,1.5601883655728,0.757736633841335,0.538192240565737,0,2.40179147216586,7.95863929436036,8.63714375142737,6.28056817368196,6.80601720036656,3.01511263395268,2.85652369063216,1.95133647857799,3.31033802623001,3.10050565508285,3.34855014180723,2.62181303545181,3.62638461918381,2.4590339958857,1.50791283939272,1.08781136763742,10.8188140064188,20.9711927191597,97.2936575326019,92.0111739748795,10.9836413402373,5.55436039849621,13.2513452154828,16.3984272604588,22.6194567619439,13.860190281248,16.4871018820972,18.3999745012741,11.7395103485719,20.4579100537918,19.7643888973262,84.1861849025134,14.9037089468682,13.7110514823787,11.0763132360432,17.8167732810338,10.619611067197,14.3240575331439,17.5347663039556,13.7681708221806,10.6308681437078,10.7602301780375,8.26970538138308,9.45187696641514,17.1118741624666,5.68866164284469,3.16255825724996,7.21948802737308,56.172534949375,32.7711191136985,35.9617140916057,36.6516329904023,31.2118811210402,46.7326302117425,49.035608139432,21.0080814889074,33.0887108369832,43.0019103853555,3.30792597082443,11.5420377059036,10.172258881842,8.50412241486998,7.04296829618505,9.68431308495861,3.78925087618806,79.3620292604981,3.07567585436135,7.42992724667601,1.66675074632741,3.57900068308913,4.10082683163076,2.97411625168479,11.2185763795945,12.5956307091292,13.1289975114203,0.954670618015114,8.69923982348122,13.6224042974989,15.4447637375176,15.4725339050707,9.38959024108564,8.36158947585888,9.25718704123762,7.59092231753686,18.79417112731,16.776161453347,8.45539408026285,20.7827999001131,15.7185565934243,18.4728628926845,17.1782565225382,19.9368228079118,21.945803626756,22.1347454234715,42.8874718701157,22.4673232368186,16.7057403629562,6.32022241256356,6.68993210457542,5.85452455839515,4.15746633528944,3.04345382634718,2.78153896693771,2.16351809135944,2.95379054349154,2.3222283488074,2.74344503957999,2.31900225814733,4.97035191772737,2.02044867444692,4.09069157635491,2.94749498699775,7.5475224147182,7.71539166841491,15.4453847054952,4.25017106870819,17.0791052660576,15.0184331899157,6.64541975145104,17.5550236412377,79.6300098090064,85.1601687538277,74.4764167471216,57.742669267479,71.2485820561468,70.2516324572421,72.2274075248032,64.3959320610635,77.0342095273148,81.2883689450357,33.2119512269365,52.6712832889361,29.5369137954652,21.8796045361465,14.0440818960748,13.7882631337511,20.0022055021454,19.1612603232172,18.6133141563253,20.2157769411038,16.9831130926461,16.9763707247469,17.7918864192777,19.9118223979143,22.572139299556,14.2888107384922,22.0180219295225,23.534924896572,14.835092428919,20.75504773895,20.9150243955103,15.9728225543404,17.1674056762071,16.2787986628208,20.9863918326187,17.5998384414687,21.4025728261144,21.834786049341,18.0619471414996,22.4456908663095,19.5747779904887,16.7457620038458,18.0061658994663,19.2121683070598,14.0821826016233,30.7267010863673,17.0770074165148,18.4789106481537,12.8163182486125,11.6913452133343,10.434052602919|short_description=p1@Srgap3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=259302 | |||
|HGNC= | |||
|MCL_coexpression_id=1655 | |||
|TSSclassifier=NA | |||
|UniProt=F8VPQ4,Q812A2,Q91Z68 | |||
|association_with_transcript=0bp_to_ENSMUST00000060215,ENSMUST00000088373,NM_080448,uc009deh.1,uc009dei.1,uc009dej.1_5end | |||
|cluster_id=chr6:112897240..112897271,- | |||
|description=CAGE_peak_1_at_Srgap3_5end | |||
|id=chr6:112897240..112897271,- | |||
|ontology_enrichment_celltype=CL:0000221!7.11e-12!44;CL:0000133!7.11e-12!44;CL:0000540!8.73e-12!33;CL:0000047!8.73e-12!33;CL:0000031!8.73e-12!33;CL:0000404!8.73e-12!33;CL:0002319!1.70e-11!43;CL:0000117!1.96e-11!23;CL:0000337!1.96e-11!23;CL:0000393!5.88e-10!39;CL:0000211!5.88e-10!39;CL:0000055!2.88e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.90e-12,44;CL:0000133,6.90e-12,44;CL:0000540,8.46e-12,33;CL:0000047,8.46e-12,33;CL:0000031,8.46e-12,33;CL:0000404,8.46e-12,33;CL:0002319,1.65e-11,43;CL:0000117,1.90e-11,23;CL:0000337,1.90e-11,23;CL:0000393,5.73e-10,39;CL:0000211,5.73e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.25e-32!102;UBERON:0000924!3.25e-32!102;UBERON:0006601!3.25e-32!102;UBERON:0001017!3.36e-31!73;UBERON:0005743!3.36e-31!73;UBERON:0000033!2.16e-30!63;UBERON:0000073!3.13e-30!75;UBERON:0001016!3.13e-30!75;UBERON:0002346!9.74e-29!71;UBERON:0003075!9.74e-29!71;UBERON:0007284!9.74e-29!71;UBERON:0001049!5.38e-26!52;UBERON:0005068!5.38e-26!52;UBERON:0006241!5.38e-26!52;UBERON:0007135!5.38e-26!52;UBERON:0003056!8.22e-26!49;UBERON:0000955!2.87e-25!50;UBERON:0006238!2.87e-25!50;UBERON:0002616!1.47e-24!49;UBERON:0003080!9.15e-21!40;UBERON:0002780!4.15e-20!39;UBERON:0001890!4.15e-20!39;UBERON:0006240!4.15e-20!39;UBERON:0002020!6.96e-18!34;UBERON:0007811!1.84e-16!86;UBERON:0000153!2.84e-16!94;UBERON:0002791!8.92e-16!29;UBERON:0003528!8.92e-16!29;UBERON:0001893!8.92e-16!29;UBERON:0000956!8.83e-12!21;UBERON:0001869!8.83e-12!21;UBERON:0000203!8.83e-12!21;UBERON:0002619!6.14e-10!17;UBERON:0002021!3.58e-07!10;UBERON:0000411!3.58e-07!10;UBERON:0001950!3.58e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.87e-34,95;UBERON:0000924,3.87e-34,95;UBERON:0006601,3.87e-34,95;UBERON:0002346,1.54e-31,64;UBERON:0003075,1.54e-31,64;UBERON:0007284,1.54e-31,64;UBERON:0001017,3.07e-31,73;UBERON:0010371,1.97e-30,73;UBERON:0001016,2.87e-30,75;UBERON:0000073,5.82e-27,54;UBERON:0001049,5.00e-26,52;UBERON:0005068,5.00e-26,52;UBERON:0006241,5.00e-26,52;UBERON:0007135,5.00e-26,52;UBERON:0003056,7.65e-26,49;UBERON:0000955,1.06e-23,47;UBERON:0006238,1.06e-23,47;UBERON:0002616,5.31e-23,46;UBERON:0003080,8.64e-21,40;UBERON:0002780,3.93e-20,39;UBERON:0001890,3.93e-20,39;UBERON:0006240,3.93e-20,39;UBERON:0002020,6.63e-18,34;UBERON:0010314,4.58e-16,92;UBERON:0003528,8.55e-16,29;UBERON:0002791,8.55e-16,29;UBERON:0001893,8.55e-16,29;UBERON:0000956,8.56e-12,21;UBERON:0001869,8.56e-12,21;UBERON:0000203,8.56e-12,21;UBERON:0002619,5.99e-10,17;UBERON:0002021,3.52e-07,10;UBERON:0000411,3.52e-07,10;UBERON:0001950,3.52e-07,10 | |||
|phase1_expression=21.1396478178328,0,0,0,0,0.503637815735669,0.233612640595526,0,0.140788722151667,0,3.76679530096111,2.07407613387875,0,0,1.66554880907831,1.01237633694913,0.699561878128147,2.05050407482854,1.91960207048034,1.69755860719212,26.5335065271338,7.94327609607082,1.30599894569468,0.639969691173627,0.22940928106717,0,0,0.215471232685889,0.950117097281869,1.00812051903972,0.443461021310609,0,0,0,0.577703239502549,0.332469290716985,1.22501613757421,0,0,1.57057123192139,0,0,0,19.8916972401412,20.2753862439029,13.2153661556411,3.9119567217402,18.532138292338,20.2111288115714,35.9695313287424,14.5585878490377,30.188038516644,0.838913030288682,0,0.672187598284928,4.63066984864705,2.0057340795713,1.03134418455488,72.2269765268764,51.8411159686592,50.0726808769882,7.45457970552091,3.55717918444456,0,1.97773272513395,0.7104801149461,10.4860038681442,21.1320067926855,44.7939125172623,38.3416864862001,40.172067618114,38.8485338789173,32.6885440608388,35.3998409731217,41.8844708349693,42.284064184061,46.2486700197433,47.1166277534343,51.4581886408416,69.2403010583518,62.303085293241,61.9886910962544,43.8317308432168,42.207195752376,59.2857201374023,39.1856018679978,53.5317519804627,46.0406631188492,4.31639301999149,9.52201657345497,3.18850937571846,0,0,1.07940638327563,0.649776417447669,0,6.03911006566533,20.2812083867889,12.2099422163348,8.48014978824817,38.0277233397037,15.3991772897181,28.028576367731,14.2213340630666,4.32982082022428,3.80039798212648,2.52762222507392,6.73684890342454,12.9468941823586,6.82833839698194,14.7462527751215,7.30717147949139,7.61031140944993,11.0027527603414,11.5236932992991,4.77533047052767,8.40462890296871,3.32578520915797,6.19227386364912,15.0443170451091,8.17113618303456,8.727754556434,14.9113408974498,132.629701046231,130.485298344783,3.32094171771169,11.2626217035565,5.39912457894067,7.49714339731082,78.1907137693175,57.6450759551469,42.596825366261,109.856970361519,101.774752017472,60.2585329222724,76.2533936418461,5.09196819251581,11.3210343255185,4.0435641349388,28.1992086887875,33.9614356132657,33.3358051428536,55.6391981098529,100.972227949929,129.337384886674,130.291653529692,87.7048141879062,42.1686494304596,6.03590380211958,11.7245769704048,13.3722854364601,8.76782929710299,16.9608822027615,12.8853301613202,17.2856994582672,14.7285357445685,1.40442637462647,1.80143534980301,1.42081749697796,1.65700618028402,1.40715635988658,1.98068267607116,4.49814997611899,1.57411385397923,2.46827380619805,0.930135779001631,1.60964040839772,2.10177616260905,2.63295759861569,3.2833492815819,2.43206428637567,2.19299981137998,2.41505126820156,1.07365135008297,144.048614766427,76.2523177730498,2.31293148088659,2.3800550999719,7.46508876873319,8.59275685883622,12.371276286921,9.88249270654378,6.22658522765637,5.89699440948933,2.84717436926707,3.29397909448022,4.77536896720512,4.97391180102877,6.43381487493096,1.79763881730844,4.53889904736858,3.98282546508734,5.69003702859245,12.5673363870702,11.270773567308,10.7935203758017,9.50367187121366,11.221731182451,12.9634901104727,16.5323365737154,14.7578804170892,11.9695249004147,0.296452627087149,2.50267658574141,3.34150291692445,1.57403478669398,1.42002084971952,2.41177159752417,1.52775511068852,1.43848068725405,2.2698931748505,1.09824565275233,2.87536413054709,0.744281895337007,1.5601883655728,0.757736633841335,0.538192240565737,0,2.40179147216586,7.95863929436036,8.63714375142737,6.28056817368196,6.80601720036656,3.01511263395268,2.85652369063216,1.95133647857799,3.31033802623001,3.10050565508285,3.34855014180723,2.62181303545181,3.62638461918381,2.4590339958857,1.50791283939272,1.08781136763742,10.8188140064188,20.9711927191597,97.2936575326019,92.0111739748795,10.9836413402373,5.55436039849621,13.2513452154828,16.3984272604588,22.6194567619439,13.860190281248,16.4871018820972,18.3999745012741,11.7395103485719,20.4579100537918,19.7643888973262,84.1861849025134,14.9037089468682,13.7110514823787,11.0763132360432,17.8167732810338,10.619611067197,14.3240575331439,17.5347663039556,13.7681708221806,10.6308681437078,10.7602301780375,8.26970538138308,9.45187696641514,17.1118741624666,5.68866164284469,3.16255825724996,7.21948802737308,56.172534949375,32.7711191136985,35.9617140916057,36.6516329904023,31.2118811210402,46.7326302117425,49.035608139432,21.0080814889074,33.0887108369832,43.0019103853555,3.30792597082443,11.5420377059036,10.172258881842,8.50412241486998,7.04296829618505,9.68431308495861,3.78925087618806,79.3620292604981,3.07567585436135,7.42992724667601,1.66675074632741,3.57900068308913,4.10082683163076,2.97411625168479,11.2185763795945,12.5956307091292,13.1289975114203,0.954670618015114,8.69923982348122,13.6224042974989,15.4447637375176,15.4725339050707,9.38959024108564,8.36158947585888,9.25718704123762,7.59092231753686,18.79417112731,16.776161453347,8.45539408026285,20.7827999001131,15.7185565934243,18.4728628926845,17.1782565225382,19.9368228079118,21.945803626756,22.1347454234715,42.8874718701157,22.4673232368186,16.7057403629562,6.32022241256356,6.68993210457542,5.85452455839515,4.15746633528944,3.04345382634718,2.78153896693771,2.16351809135944,2.95379054349154,2.3222283488074,2.74344503957999,2.31900225814733,4.97035191772737,2.02044867444692,4.09069157635491,2.94749498699775,7.5475224147182,7.71539166841491,15.4453847054952,4.25017106870819,17.0791052660576,15.0184331899157,6.64541975145104,17.5550236412377,79.6300098090064,85.1601687538277,74.4764167471216,57.742669267479,71.2485820561468,70.2516324572421,72.2274075248032,64.3959320610635,77.0342095273148,81.2883689450357,33.2119512269365,52.6712832889361,29.5369137954652,21.8796045361465,14.0440818960748,13.7882631337511,20.0022055021454,19.1612603232172,18.6133141563253,20.2157769411038,16.9831130926461,16.9763707247469,17.7918864192777,19.9118223979143,22.572139299556,14.2888107384922,22.0180219295225,23.534924896572,14.835092428919,20.75504773895,20.9150243955103,15.9728225543404,17.1674056762071,16.2787986628208,20.9863918326187,17.5998384414687,21.4025728261144,21.834786049341,18.0619471414996,22.4456908663095,19.5747779904887,16.7457620038458,18.0061658994663,19.2121683070598,14.0821826016233,30.7267010863673,17.0770074165148,18.4789106481537,12.8163182486125,11.6913452133343,10.434052602919 | |||
|short_description=p1@Srgap3 | |||
}} |
Latest revision as of 11:11, 26 September 2015
Short description: | p1@Srgap3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Srgap3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1655 |
Association with transcript: | 0bp_to_ENSMUST00000060215, ENSMUST00000088373, NM_080448, uc009deh.1, uc009dei.1, uc009dej.1_5end |
EntrezGene: | Srgap3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.90e-12 | 44 |
neurectodermal cell | 6.90e-12 | 44 |
neuron | 8.46e-12 | 33 |
neuronal stem cell | 8.46e-12 | 33 |
neuroblast | 8.46e-12 | 33 |
electrically signaling cell | 8.46e-12 | 33 |
neural cell | 1.65e-11 | 43 |
CNS neuron (sensu Vertebrata) | 1.90e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.90e-11 | 23 |
electrically responsive cell | 5.73e-10 | 39 |
electrically active cell | 5.73e-10 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.87e-34 | 95 |
ectoderm | 3.87e-34 | 95 |
presumptive ectoderm | 3.87e-34 | 95 |
neurectoderm | 1.54e-31 | 64 |
neural plate | 1.54e-31 | 64 |
presumptive neural plate | 1.54e-31 | 64 |
central nervous system | 3.07e-31 | 73 |
ecto-epithelium | 1.97e-30 | 73 |
nervous system | 2.87e-30 | 75 |
regional part of nervous system | 5.82e-27 | 54 |
neural tube | 5.00e-26 | 52 |
neural rod | 5.00e-26 | 52 |
future spinal cord | 5.00e-26 | 52 |
neural keel | 5.00e-26 | 52 |
pre-chordal neural plate | 7.65e-26 | 49 |
brain | 1.06e-23 | 47 |
future brain | 1.06e-23 | 47 |
regional part of brain | 5.31e-23 | 46 |
anterior neural tube | 8.64e-21 | 40 |
regional part of forebrain | 3.93e-20 | 39 |
forebrain | 3.93e-20 | 39 |
future forebrain | 3.93e-20 | 39 |
gray matter | 6.63e-18 | 34 |
structure with developmental contribution from neural crest | 4.58e-16 | 92 |
brain grey matter | 8.55e-16 | 29 |
regional part of telencephalon | 8.55e-16 | 29 |
telencephalon | 8.55e-16 | 29 |
cerebral cortex | 8.56e-12 | 21 |
cerebral hemisphere | 8.56e-12 | 21 |
pallium | 8.56e-12 | 21 |
regional part of cerebral cortex | 5.99e-10 | 17 |
occipital lobe | 3.52e-07 | 10 |
visual cortex | 3.52e-07 | 10 |
neocortex | 3.52e-07 | 10 |