FFCP PHASE1:Mm9::chr9:20807359..20807370,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66163 | |EntrezGene=66163 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9DCU6 | |UniProt=Q9DCU6 | ||
|association_with_transcript=178bp_to_ENSMUST00000003386,NM_023167,uc009oju.1,uc009ojv.1_5end | |association_with_transcript=178bp_to_ENSMUST00000003386,NM_023167,uc009oju.1,uc009ojv.1_5end | ||
|cluster_id=chr9:20807359..20807370,+ | |||
|description=CAGE_peak_2_at_Mrpl4_5end | |description=CAGE_peak_2_at_Mrpl4_5end | ||
|id=chr9:20807359..20807370,+ | |id=chr9:20807359..20807370,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.60e-11!50;CL:0000221!1.17e-10!44;CL:0000133!1.17e-10!44;CL:0002319!2.30e-10!43;CL:0000393!7.39e-07!39;CL:0000211!7.39e-07!39 | |ontology_enrichment_celltype=CL:0000055!2.60e-11!50;CL:0000221!1.17e-10!44;CL:0000133!1.17e-10!44;CL:0002319!2.30e-10!43;CL:0000393!7.39e-07!39;CL:0000211!7.39e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.17e-10,44;CL:0000133,1.17e-10,44;CL:0002319,2.30e-10,43;CL:0000393,7.39e-07,39;CL:0000211,7.39e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.61e-17!75;UBERON:0001016!1.61e-17!75;UBERON:0001017!2.85e-17!73;UBERON:0005743!2.85e-17!73;UBERON:0001049!4.36e-13!52;UBERON:0005068!4.36e-13!52;UBERON:0006241!4.36e-13!52;UBERON:0007135!4.36e-13!52;UBERON:0000955!3.79e-12!50;UBERON:0006238!3.79e-12!50;UBERON:0002616!1.01e-11!49;UBERON:0004121!1.28e-11!102;UBERON:0000924!1.28e-11!102;UBERON:0006601!1.28e-11!102;UBERON:0002346!1.73e-11!71;UBERON:0003075!1.73e-11!71;UBERON:0007284!1.73e-11!71;UBERON:0002020!1.48e-10!34;UBERON:0002791!2.72e-08!29;UBERON:0003528!2.72e-08!29;UBERON:0001893!2.72e-08!29;UBERON:0003080!4.12e-08!40;UBERON:0000033!6.96e-08!63;UBERON:0002780!1.18e-07!39;UBERON:0001890!1.18e-07!39;UBERON:0006240!1.18e-07!39;UBERON:0000025!2.73e-07!114;UBERON:0000956!3.84e-07!21;UBERON:0001869!3.84e-07!21;UBERON:0000203!3.84e-07!21 | |ontology_enrichment_uberon=UBERON:0000073!1.61e-17!75;UBERON:0001016!1.61e-17!75;UBERON:0001017!2.85e-17!73;UBERON:0005743!2.85e-17!73;UBERON:0001049!4.36e-13!52;UBERON:0005068!4.36e-13!52;UBERON:0006241!4.36e-13!52;UBERON:0007135!4.36e-13!52;UBERON:0000955!3.79e-12!50;UBERON:0006238!3.79e-12!50;UBERON:0002616!1.01e-11!49;UBERON:0004121!1.28e-11!102;UBERON:0000924!1.28e-11!102;UBERON:0006601!1.28e-11!102;UBERON:0002346!1.73e-11!71;UBERON:0003075!1.73e-11!71;UBERON:0007284!1.73e-11!71;UBERON:0002020!1.48e-10!34;UBERON:0002791!2.72e-08!29;UBERON:0003528!2.72e-08!29;UBERON:0001893!2.72e-08!29;UBERON:0003080!4.12e-08!40;UBERON:0000033!6.96e-08!63;UBERON:0002780!1.18e-07!39;UBERON:0001890!1.18e-07!39;UBERON:0006240!1.18e-07!39;UBERON:0000025!2.73e-07!114;UBERON:0000956!3.84e-07!21;UBERON:0001869!3.84e-07!21;UBERON:0000203!3.84e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.61e-17,75;UBERON:0001017,2.85e-17,73;UBERON:0010314,6.57e-16,92;UBERON:0000073,4.62e-14,54;UBERON:0001049,4.36e-13,52;UBERON:0005068,4.36e-13,52;UBERON:0006241,4.36e-13,52;UBERON:0007135,4.36e-13,52;UBERON:0000955,1.04e-10,47;UBERON:0006238,1.04e-10,47;UBERON:0002020,1.48e-10,34;UBERON:0002616,2.68e-10,46;UBERON:0004121,6.38e-10,95;UBERON:0000924,6.38e-10,95;UBERON:0006601,6.38e-10,95;UBERON:0002346,8.47e-10,64;UBERON:0003075,8.47e-10,64;UBERON:0007284,8.47e-10,64;UBERON:0003528,2.72e-08,29;UBERON:0002791,2.72e-08,29;UBERON:0001893,2.72e-08,29;UBERON:0003080,4.12e-08,40;UBERON:0010371,1.16e-07,73;UBERON:0002780,1.18e-07,39;UBERON:0001890,1.18e-07,39;UBERON:0006240,1.18e-07,39;UBERON:0000025,2.73e-07,114;UBERON:0000956,3.84e-07,21;UBERON:0001869,3.84e-07,21;UBERON:0000203,3.84e-07,21 | |||
|phase1_expression=6.08565618998217,5.93258192986914,6.3699893514535,4.83942738090928,4.50806156951712,4.53274034162102,3.73780224952841,2.45334314538995,1.97104211012333,4.21316147379588,1.88339765048055,1.7549874978974,4.45121897821135,4.10875891369288,4.66353666541928,2.42970320867791,6.29605690315332,4.88966356305268,3.15363197293199,3.39511721438424,8.50432901510698,4.76596565764249,8.35839325244593,5.91971964335605,7.11168771308227,6.89078356938024,6.8921919385452,5.38678081714723,8.93110071444957,6.04872311423834,7.76056787293567,8.89042942843484,11.6862309641068,0,8.37669697278696,7.48055904113216,5.51257261908397,5.02237956884289,5.4693474116666,3.14114246384279,4.1176204162171,0.683045484958446,2.42755176515577,6.6725313527056,6.38674666682942,6.24058957349717,31.2956537739216,15.0437357902508,11.4236815021925,12.4435135407541,7.8392396110203,12.9377307928474,3.85899993932794,4.35217285206807,3.6970317905671,9.26133969729409,7.16333599846892,6.18806510732931,7.68802551266472,5.81890077199236,7.60597684207415,8.13226876965917,10.6715375533337,13.9484456178617,18.7884608887725,15.6305625288142,20.9720077362883,25.3584081512226,6.73982480005105,7.02030879324791,9.04397333810943,15.7108041422092,16.1234034894678,6.73699395682247,7.66763768145891,9.19218786610021,12.1127469099328,11.4918604276669,11.0596703944495,6.06676923558892,6.40413505216868,4.16730696445408,18.7052609330925,9.56696437053856,11.3070703354839,10.606629077052,9.681274294339,8.20157561631323,8.40560745998343,6.04572480854284,4.05810284182349,11.185510400758,3.39985666853875,4.85732872474035,3.89865850468601,4.03224198387602,5.05599912474307,7.32850387085648,11.950156211732,7.0667914902068,8.45060518660083,2.56652954828636,0,0,6.71122227134764,4.56047757855178,6.0662933401774,5.1382745873577,2.33044095282455,8.90652834388949,5.20455980298408,9.74289530598852,9.91646638201052,8.44046787094686,6.70255630673517,12.3153259503082,2.71914464507811,10.5557530551536,2.65383165584962,4.85300549842228,5.07935492458905,1.93950101254089,1.86391761218122,6.14839673724249,9.00620839297857,4.59822699375465,5.03223522924865,6.59893004092748,7.75128385145695,12.1330417917906,8.23501085073528,9.1727677042391,8.51739168942155,12.2743419518559,12.0517065844545,12.6548185192851,4.58277137326423,5.10068579501381,5.55990068554084,3.78795340595653,6.63614259109789,5.74755261083682,3.96136685571768,3.46621081022145,3.19771546011241,3.45907044769094,4.96619140166563,5.69147415625834,9.48499168904506,6.42960672570586,4.57472922826267,6.35667624039967,3.61461423993277,2.78601733217733,4.11564272815887,6.56813080501028,4.21327912387941,9.52187256324446,9.37739548005456,5.59239585845855,6.0976775595085,5.58192390529146,4.49814997611899,7.28027657465394,9.10175966035532,13.0219009060228,10.4626626545851,8.17357396570186,10.3672705445493,10.1783827729039,10.8632204791447,15.3509986796599,15.3685080703735,12.8838162009957,7.57043814830858,6.38008596751563,2.97376904685418,5.81791246659797,7.25180051819795,4.41249676534833,3.73715637834071,6.45387278794696,6.89371935919098,5.32631753115166,8.0669940462567,6.91735609840846,9.0480675168097,5.37182474511107,4.28920991662064,5.39291645192533,7.5648317456143,4.58024928485045,7.96605184002943,6.39791670614481,3.38123207019241,4.2766778847516,6.20647958936402,5.96154469067708,5.75452487830741,7.23289725100051,7.22194148070324,9.99517027766584,3.55743152504579,3.50374722003798,4.52085688760367,4.27238013531222,4.26006254915856,4.58236603529592,5.60176873919124,3.74004978686054,3.56697498905078,6.31491250332587,4.31304619582064,3.72140947668503,5.92871578917665,6.06189307073068,4.4849353380478,5.30687873499704,4.0645701836653,6.253216588426,6.02970412835496,5.7713329163564,5.63256595892405,5.02518772325447,4.52282917683426,4.29294025287157,4.25614889086716,5.75808193086815,3.50800491046472,6.39066927391378,5.00786447411097,6.65385669474953,6.03165135757089,8.15858525728064,4.42587845717133,4.69092468718045,12.0412942490844,9.25972324078405,4.26230857979356,7.82659874333556,7.2566890465739,7.02789739733949,9.26320610251035,5.73525115086125,7.79795359288379,4.24614796183249,8.90583543684768,7.89090816360542,3.16230222357219,10.2822821254978,6.24536374916382,6.05423052468668,5.04949573996086,5.77395430403874,2.65490276679926,5.09839335925461,6.04647113929502,3.20628635585027,3.54362271456927,2.45948118355142,5.16856586336442,3.99887102425256,3.20847640546249,2.52829406348653,3.16255825724996,1.03135543248187,4.42571487479924,9.18311579559682,8.27895576209629,6.85878512101095,5.32020700926821,3.21063871683727,4.44282355625727,5.78483403317739,3.05073220482823,5.50763384245932,2.20528398054962,3.62749756471256,3.87514624070173,4.16159182004275,5.96861720015682,4.59594519286172,4.95517422270746,12.2380699326936,5.46786818553129,5.57244543500701,4.8150577116125,3.01389531207506,3.55404992074665,2.97411625168479,7.13909405974192,8.11718423477216,5.11339903076368,6.68269432610579,5.53587988766987,3.04979200690273,5.61627772273367,4.181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|phase1_expression=6.08565618998217,5.93258192986914,6.3699893514535,4.83942738090928,4.50806156951712,4.53274034162102,3.73780224952841,2.45334314538995,1.97104211012333,4.21316147379588,1.88339765048055,1.7549874978974,4.45121897821135,4.10875891369288,4.66353666541928,2.42970320867791,6.29605690315332,4.88966356305268,3.15363197293199,3.39511721438424,8.50432901510698,4.76596565764249,8.35839325244593,5.91971964335605,7.11168771308227,6.89078356938024,6.8921919385452,5.38678081714723,8.93110071444957,6.04872311423834,7.76056787293567,8.89042942843484,11.6862309641068,0,8.37669697278696,7.48055904113216,5.51257261908397,5.02237956884289,5.4693474116666,3.14114246384279,4.1176204162171,0.683045484958446,2.42755176515577,6.6725313527056,6.38674666682942,6.24058957349717,31.2956537739216,15.0437357902508,11.4236815021925,12.4435135407541,7.8392396110203,12.9377307928474,3.85899993932794,4.35217285206807,3.6970317905671,9.26133969729409,7.16333599846892,6.18806510732931,7.68802551266472,5.81890077199236,7.60597684207415,8.13226876965917,10.6715375533337,13.9484456178617,18.7884608887725,15.6305625288142,20.9720077362883,25.3584081512226,6.73982480005105,7.02030879324791,9.04397333810943,15.7108041422092,16.1234034894678,6.73699395682247,7.66763768145891,9.19218786610021,12.1127469099328,11.4918604276669,11.0596703944495,6.06676923558892,6.40413505216868,4.16730696445408,18.7052609330925,9.56696437053856,11.3070703354839,10.606629077052,9.681274294339,8.20157561631323,8.40560745998343,6.04572480854284,4.05810284182349,11.185510400758,3.39985666853875,4.85732872474035,3.89865850468601,4.03224198387602,5.05599912474307,7.32850387085648,11.950156211732,7.0667914902068,8.45060518660083,2.56652954828636,0,0,6.71122227134764,4.56047757855178,6.0662933401774,5.1382745873577,2.33044095282455,8.90652834388949,5.20455980298408,9.74289530598852,9.91646638201052,8.44046787094686,6.70255630673517,12.3153259503082,2.71914464507811,10.5557530551536,2.65383165584962,4.85300549842228,5.07935492458905,1.93950101254089,1.86391761218122,6.14839673724249,9.00620839297857,4.59822699375465,5.03223522924865,6.59893004092748,7.75128385145695,12.1330417917906,8.23501085073528,9.1727677042391,8.51739168942155,12.2743419518559,12.0517065844545,12.6548185192851,4.58277137326423,5.10068579501381,5.55990068554084,3.78795340595653,6.63614259109789,5.74755261083682,3.96136685571768,3.46621081022145,3.19771546011241,3.45907044769094,4.96619140166563,5.69147415625834,9.48499168904506,6.42960672570586,4.57472922826267,6.35667624039967,3.61461423993277,2.78601733217733,4.11564272815887,6.56813080501028,4.21327912387941,9.52187256324446,9.37739548005456,5.59239585845855,6.0976775595085,5.58192390529146,4.49814997611899,7.28027657465394,9.10175966035532,13.0219009060228,10.4626626545851,8.17357396570186,10.3672705445493,10.1783827729039,10.8632204791447,15.3509986796599,15.3685080703735,12.8838162009957,7.57043814830858,6.38008596751563,2.97376904685418,5.81791246659797,7.25180051819795,4.41249676534833,3.73715637834071,6.45387278794696,6.89371935919098,5.32631753115166,8.0669940462567,6.91735609840846,9.0480675168097,5.37182474511107,4.28920991662064,5.39291645192533,7.5648317456143,4.58024928485045,7.96605184002943,6.39791670614481,3.38123207019241,4.2766778847516,6.20647958936402,5.96154469067708,5.75452487830741,7.23289725100051,7.22194148070324,9.99517027766584,3.55743152504579,3.50374722003798,4.52085688760367,4.27238013531222,4.26006254915856,4.58236603529592,5.60176873919124,3.74004978686054,3.56697498905078,6.31491250332587,4.31304619582064,3.72140947668503,5.92871578917665,6.06189307073068,4.4849353380478,5.30687873499704,4.0645701836653,6.253216588426,6.02970412835496,5.7713329163564,5.63256595892405,5.02518772325447,4.52282917683426,4.29294025287157,4.25614889086716,5.75808193086815,3.50800491046472,6.39066927391378,5.00786447411097,6.65385669474953,6.03165135757089,8.15858525728064,4.42587845717133,4.69092468718045,12.0412942490844,9.25972324078405,4.26230857979356,7.82659874333556,7.2566890465739,7.02789739733949,9.26320610251035,5.73525115086125,7.79795359288379,4.24614796183249,8.90583543684768,7.89090816360542,3.16230222357219,10.2822821254978,6.24536374916382,6.05423052468668,5.04949573996086,5.77395430403874,2.65490276679926,5.09839335925461,6.04647113929502,3.20628635585027,3.54362271456927,2.45948118355142,5.16856586336442,3.99887102425256,3.20847640546249,2.52829406348653,3.16255825724996,1.03135543248187,4.42571487479924,9.18311579559682,8.27895576209629,6.85878512101095,5.32020700926821,3.21063871683727,4.44282355625727,5.78483403317739,3.05073220482823,5.50763384245932,2.20528398054962,3.62749756471256,3.87514624070173,4.16159182004275,5.96861720015682,4.59594519286172,4.95517422270746,12.2380699326936,5.46786818553129,5.57244543500701,4.8150577116125,3.01389531207506,3.55404992074665,2.97411625168479,7.13909405974192,8.11718423477216,5.11339903076368,6.68269432610579,5.53587988766987,3.04979200690273,5.61627772273367,4.181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| ||
|short_description=p2@Mrpl4 | |short_description=p2@Mrpl4 | ||
}} | }} |
Latest revision as of 10:58, 26 September 2015
Short description: | p2@Mrpl4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mrpl4_5end |
Coexpression cluster: | NA |
Association with transcript: | 178bp_to_ENSMUST00000003386, NM_023167, uc009oju.1, uc009ojv.1_5end |
EntrezGene: | Mrpl4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.17e-10 | 44 |
neurectodermal cell | 1.17e-10 | 44 |
neural cell | 2.30e-10 | 43 |
electrically responsive cell | 7.39e-07 | 39 |
electrically active cell | 7.39e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.61e-17 | 75 |
central nervous system | 2.85e-17 | 73 |
structure with developmental contribution from neural crest | 6.57e-16 | 92 |
regional part of nervous system | 4.62e-14 | 54 |
neural tube | 4.36e-13 | 52 |
neural rod | 4.36e-13 | 52 |
future spinal cord | 4.36e-13 | 52 |
neural keel | 4.36e-13 | 52 |
brain | 1.04e-10 | 47 |
future brain | 1.04e-10 | 47 |
gray matter | 1.48e-10 | 34 |
regional part of brain | 2.68e-10 | 46 |
ectoderm-derived structure | 6.38e-10 | 95 |
ectoderm | 6.38e-10 | 95 |
presumptive ectoderm | 6.38e-10 | 95 |
neurectoderm | 8.47e-10 | 64 |
neural plate | 8.47e-10 | 64 |
presumptive neural plate | 8.47e-10 | 64 |
brain grey matter | 2.72e-08 | 29 |
regional part of telencephalon | 2.72e-08 | 29 |
telencephalon | 2.72e-08 | 29 |
anterior neural tube | 4.12e-08 | 40 |
ecto-epithelium | 1.16e-07 | 73 |
regional part of forebrain | 1.18e-07 | 39 |
forebrain | 1.18e-07 | 39 |
future forebrain | 1.18e-07 | 39 |
tube | 2.73e-07 | 114 |
cerebral cortex | 3.84e-07 | 21 |
cerebral hemisphere | 3.84e-07 | 21 |
pallium | 3.84e-07 | 21 |