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FFCP PHASE1:Mm9::chr2:26171033..26171122,+: Difference between revisions

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(Created page with "{{FFCP |id=chr2:26171033..26171122,+ |short_description=p1@Gpsm1 |description=CAGE_peak_1_at_Gpsm1_5end |association_with_transcript=0bp_to_ENSMUST00000066914,ENSMUST00000...")
 
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{{FFCP
{{FFCP
|id=chr2:26171033..26171122,+
|DHSsupport=NA
|short_description=p1@Gpsm1
|DPIdataset=NA
|description=CAGE_peak_1_at_Gpsm1_5end
|association_with_transcript=0bp_to_ENSMUST00000066914,ENSMUST00000066936,ENSMUST00000078616,ENSMUST00000114135,NM_001199146,NM_153410,uc008iun.2,uc008iuo.2_5end
|EntrezGene=67839
|EntrezGene=67839
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q6IR34,E9Q2Y2
|UniProt=Q6IR34,E9Q2Y2
|association_with_transcript=0bp_to_ENSMUST00000066914,ENSMUST00000066936,ENSMUST00000078616,ENSMUST00000114135,NM_001199146,NM_153410,uc008iun.2,uc008iuo.2_5end
|cluster_id=chr2:26171033..26171122,+
|description=CAGE_peak_1_at_Gpsm1_5end
|id=chr2:26171033..26171122,+
|ontology_enrichment_celltype=CL:0000540!2.46e-15!33;CL:0000047!2.46e-15!33;CL:0000031!2.46e-15!33;CL:0000404!2.46e-15!33;CL:0000221!1.25e-13!44;CL:0000133!1.25e-13!44;CL:0002319!2.54e-13!43;CL:0000393!9.05e-13!39;CL:0000211!9.05e-13!39;CL:0000117!1.39e-12!23;CL:0000337!1.39e-12!23;CL:0000055!5.43e-11!50
|ontology_enrichment_celltype_v019_2=CL:0000540,2.44e-15,33;CL:0000047,2.44e-15,33;CL:0000031,2.44e-15,33;CL:0000404,2.44e-15,33;CL:0000221,1.24e-13,44;CL:0000133,1.24e-13,44;CL:0002319,2.53e-13,43;CL:0000393,9.00e-13,39;CL:0000211,9.00e-13,39;CL:0000117,1.38e-12,23;CL:0000337,1.38e-12,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.63e-20!73;UBERON:0005743!1.63e-20!73;UBERON:0004121!1.18e-19!102;UBERON:0000924!1.18e-19!102;UBERON:0006601!1.18e-19!102;UBERON:0000073!1.94e-19!75;UBERON:0001016!1.94e-19!75;UBERON:0002346!1.36e-15!71;UBERON:0003075!1.36e-15!71;UBERON:0007284!1.36e-15!71;UBERON:0001049!8.06e-15!52;UBERON:0005068!8.06e-15!52;UBERON:0006241!8.06e-15!52;UBERON:0007135!8.06e-15!52;UBERON:0000033!1.56e-14!63;UBERON:0003056!2.91e-12!49;UBERON:0000955!7.63e-12!50;UBERON:0006238!7.63e-12!50;UBERON:0002616!9.45e-12!49;UBERON:0000153!5.66e-11!94;UBERON:0002020!5.36e-10!34;UBERON:0003080!6.70e-10!40;UBERON:0002780!1.76e-09!39;UBERON:0001890!1.76e-09!39;UBERON:0006240!1.76e-09!39;UBERON:0007811!2.99e-09!86;UBERON:0002791!3.16e-07!29;UBERON:0003528!3.16e-07!29;UBERON:0001893!3.16e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.37e-21,95;UBERON:0000924,3.37e-21,95;UBERON:0006601,3.37e-21,95;UBERON:0001017,1.61e-20,73;UBERON:0001016,1.92e-19,75;UBERON:0010371,1.44e-17,73;UBERON:0002346,1.74e-17,64;UBERON:0003075,1.74e-17,64;UBERON:0007284,1.74e-17,64;UBERON:0001049,8.01e-15,52;UBERON:0005068,8.01e-15,52;UBERON:0006241,8.01e-15,52;UBERON:0007135,8.01e-15,52;UBERON:0000073,1.07e-14,54;UBERON:0010314,7.92e-14,92;UBERON:0003056,2.89e-12,49;UBERON:0000955,8.82e-12,47;UBERON:0006238,8.82e-12,47;UBERON:0002616,1.08e-11,46;UBERON:0002020,5.33e-10,34;UBERON:0003080,6.67e-10,40;UBERON:0002780,1.75e-09,39;UBERON:0001890,1.75e-09,39;UBERON:0006240,1.75e-09,39;UBERON:0003528,3.15e-07,29;UBERON:0002791,3.15e-07,29;UBERON:0001893,3.15e-07,29
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69541,6.20062232552609,15.6992373346178,18.3658924407378,14.3893879374595,15.8866582877609,16.2197880471147,19.5986588538409,19.0098401872167,19.2941193743308,10.6297013163443,8.92893019399383,6.63623353319174,13.3798642091508,13.0442915599331,10.2637450152458,10.5625750443814,7.54989148168807,7.3319224207181,4.57837534241189,5.95702054694071,6.32516495236499,6.35204966362095,6.52967800956341,6.92725259810372,7.71387554398355,14.964205318604,4.88369097422942,2.9605572681127,5.20442310728643,6.18206700903009,4.50437941082837,5.49454872801795,37.9432030969947,4.51414893631827,20.3310663342144,16.1113832777512,16.0410743763031,18.3882905107746,8.90607275701835,14.3524840504043,8.10027000278167,13.5096360967266,13.5942722695261,20.192652158321,27.2960724146385,31.9219898720825,31.5857170645148,19.6916440825318,16.9786661728666,18.5681943534514,19.5577120465421,15.4526292929171,19.5760717851007,21.4792629999228,17.4900716924265,18.8626341386076,16.2936222997595,18.5672941974121,16.7137214660835,11.9073422820768,20.1638727144049,14.0823730938505,15.6592642305257,19.1358596174717,19.8864166383541,17.5701048097744,16.4520971063651,17.2962235792471,18.0690010397435,16.8383069704436,18.2927972872773,13.6796249947678,19.1483800522665,20.2011217796786,16.371632501136,18.3218337218548,18.0061658994663,17.3529262128282,20.0622875420387,43.9666617170785,19.6502551094143,16.3302001076707,16.6420848899894,15.0002165001271,9.27471342481686
|phase1_expression=24.0223270657191,0.348975407639361,0.454999239389536,0,0,3.69334398206158,3.03696432774183,6.32704284863724,24.2156602100867,24.1086462111653,3.25314139628459,5.82336760665956,3.59521532855532,4.19617931611188,0.666219523631325,0.607425802169478,1.39912375625629,5.0473946457318,6.17014951225825,11.0341309467488,9.09963204616447,12.3120779489098,10.7091913546964,1.75991665072747,1.14704640533585,2.29692785646008,0.430761996159075,1.29282739611533,0.570070258369122,0.252030129759931,2.21730510655305,2.54012269383853,3.07532393792285,0,0.866554859253824,0.997407872150954,2.04169356262369,2.09265815368454,0,1.0470474879476,3.52938892818609,2.73218193983378,3.88408282424923,6.54663453473002,9.12392380975631,11.0128051297009,21.9069576417451,13.0815093828268,10.9843091367236,9.52706505463989,12.8787507895334,11.5002051491977,12.080347636157,10.1550699881588,11.0910953717013,9.00408026125814,10.8882707176728,9.7977697532714,70.2038119182804,82.5225927664371,82.3980824558033,8.4711133017283,16.8966011261116,4.94944844504769,2.96659908770092,6.3943210345149,18.8748069626595,18.0582603501131,27.8925057109805,34.021496459586,33.2313438935184,44.2759025825896,47.9284733865001,41.6468717330844,43.3221529002428,43.203282970671,15.4162233399144,16.2162919368188,15.0534402591119,72.5374582516066,71.6348249406868,59.9050376140274,22.8930059181132,22.5105044012672,18.7941844765476,45.0781735774712,41.5725307933381,52.0054453852589,5.2251073399897,6.42358260907677,6.66688324013859,5.16254326188832,2.719885334831,0,0,0.448026887097336,3.5111105032938,6.81721290312231,11.4305842025262,8.48014978824817,19.858922188512,16.6824420638613,15.2883143823987,0,4.97929394325792,7.85415582972806,4.04419556011827,2.62622923353838,2.33044095282455,8.46120192669501,15.6136794089522,11.8741536541735,8.07154240396205,8.28974523039424,11.0533384707563,4.77533047052767,7.66304399976559,3.18118585223806,4.42305275974937,13.9119490954772,7.06692859073259,9.21262980956922,0,28.6925181071316,35.8153868651008,1.78819938646014,14.7372603142282,9.59844369589452,8.13249453267614,23.5171303865572,15.5550204958333,56.1674953944504,11.1247564923057,17.1329356411321,18.90871205492,17.5220564113178,17.2108524907035,7.71323217782577,3.28539585963777,3.57751155007006,26.4144499214289,22.9902104433473,24.4884496535275,24.5648853072216,33.8821765773613,25.8789714975397,36.2625674046151,9.05461797586555,20.9100953144857,26.2857451433269,22.1698416446576,21.0427903130472,21.409638190371,18.1091126591527,20.9897779136102,18.5101868141199,4.91549231119264,4.88961023517959,4.54661599032948,18.8484453007307,16.8858763186389,18.1862682075625,14.4414288706978,15.1508458445501,11.415766353666,12.0917651270212,10.7309360559848,10.0418194435766,11.6837493438571,5.25335885053105,5.02626619184305,6.28659945928929,5.48875288227627,6.03928884421673,14.0894265537965,45.2780294468851,1.65209391491899,1.58670339998127,26.447743066369,19.043407092556,9.79392706047909,10.6892268050372,8.45036566610507,6.27744566171445,1.89811624617805,4.6115707322723,7.79139147280835,5.17286827306992,6.43381487493096,5.39291645192533,2.16138049874694,1.1948476395262,12.8974172648096,13.1385789501188,6.76246414038483,9.57161240872977,13.3827216145662,13.8167565183928,9.86489979138414,5.60918562322488,3.29697328466887,4.81248939295022,0.889357881261447,5.33904338291501,3.14494392181125,1.79889689907883,1.01430060694251,2.65294875727659,3.31013607315846,3.16465751195892,2.2698931748505,2.47105271869273,0,2.60498663367952,2.80833905803104,2.77836765741823,0.179397413521912,0.964887042726734,7.944387177164,26.5287976478679,20.3706220552532,19.1811946925963,18.7752198630802,19.4307258632506,14.7587057349329,26.5381761086606,23.4876364718225,22.8108630338238,26.3100368284854,12.2897486036803,11.7425787668809,11.8612228036839,4.52373851817817,0.54390568381871,1.96705709207614,1.37968373152366,17.8211154886449,20.6292568402278,7.04920265119704,4.54447668967871,14.5133780931478,10.5418460960092,20.8960695800815,22.4630670075399,25.8446461935577,26.3261173633614,22.2645885921192,23.380468632905,20.9502522311657,16.708708453934,18.4522110770749,17.2723635557238,17.7546785695398,10.8880281161873,0,8.98288353773431,8.76738315197778,2.45186603682668,7.97315110778086,7.99331384654211,8.26970538138308,7.27067458955011,3.56497378384721,2.52829406348653,0,5.15677716240934,8.5109901438447,28.6297139509783,25.3543020214199,21.8623775732224,20.3941268688615,22.652839835463,18.4294903074375,16.1366423030738,1.87737366450968,8.26145076368899,3.30792597082443,15.1695352706162,19.8601244835964,13.2085305592661,19.3383197285081,22.4873032650734,2.91480836629851,17.9862542950194,2.05045056957423,13.8279201535359,8.14855920426731,3.57900068308913,2.46049609897845,2.51655990527175,15.4680371294408,15.3946597556024,18.1041965683795,3.81868247206045,22.1435195506795,17.0788352386553,10.6925287413583,11.9180328728247,14.4119292072477,14.4304850631758,12.3980183588004,7.0674104335688,2.33306951925227,4.97071450469541,6.20062232552609,15.6992373346178,18.3658924407378,14.3893879374595,15.8866582877609,16.2197880471147,19.5986588538409,19.0098401872167,19.2941193743308,10.6297013163443,8.92893019399383,6.63623353319174,13.3798642091508,13.0442915599331,10.2637450152458,10.5625750443814,7.54989148168807,7.3319224207181,4.57837534241189,5.95702054694071,6.32516495236499,6.35204966362095,6.52967800956341,6.92725259810372,7.71387554398355,14.964205318604,4.88369097422942,2.9605572681127,5.20442310728643,6.18206700903009,4.50437941082837,5.49454872801795,37.9432030969947,4.51414893631827,20.3310663342144,16.1113832777512,16.0410743763031,18.3882905107746,8.90607275701835,14.3524840504043,8.10027000278167,13.5096360967266,13.5942722695261,20.192652158321,27.2960724146385,31.9219898720825,31.5857170645148,19.6916440825318,16.9786661728666,18.5681943534514,19.5577120465421,15.4526292929171,19.5760717851007,21.4792629999228,17.4900716924265,18.8626341386076,16.2936222997595,18.5672941974121,16.7137214660835,11.9073422820768,20.1638727144049,14.0823730938505,15.6592642305257,19.1358596174717,19.8864166383541,17.5701048097744,16.4520971063651,17.2962235792471,18.0690010397435,16.8383069704436,18.2927972872773,13.6796249947678,19.1483800522665,20.2011217796786,16.371632501136,18.3218337218548,18.0061658994663,17.3529262128282,20.0622875420387,43.9666617170785,19.6502551094143,16.3302001076707,16.6420848899894,15.0002165001271,9.27471342481686
|short_description=p1@Gpsm1
}}
}}

Latest revision as of 10:56, 26 September 2015

Short description:p1@Gpsm1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gpsm1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 0bp_to_ENSMUST00000066914, ENSMUST00000066936, ENSMUST00000078616, ENSMUST00000114135, NM_001199146, NM_153410, uc008iun.2, uc008iuo.2_5end
EntrezGene:Gpsm1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gpsm1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G724.02
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E724.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F224.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.25
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.82
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.60
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.20
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.17
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.03
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H212.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I910.71
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.55
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D99.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.01
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B721.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.08
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.88
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.08
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.09
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.89
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.80
Mouse Granule cells, donor1.CNhs12131.11713-123C370.20
Mouse Granule cells, donor2.CNhs12357.11731-123E382.52
Mouse Granule cells, donor3.CNhs12108.11636-122C782.40
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.47
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C818.87
Mouse Microglia, donor2.CNhs12634.11736-123E818.06
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D527.89
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F534.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D933.23
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F144.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D547.93
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D241.65
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F243.32
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D643.20
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.22
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D472.54
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F471.63
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D859.91
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E522.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.79
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D645.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F641.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E152.01
Mouse Schwann, donor1.CNhs12507.11728-123D95.23
Mouse Schwann, donor2.CNhs12573.11746-123F96.42
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.67
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.48
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.86
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H116.68
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.98
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D78.46
adrenal gland, embryo E14.CNhs11038.406-44C515.61
adrenal gland, embryo E16.CNhs11004.1254-43D611.87
adrenal gland, embryo E17.CNhs11043.1263-45I18.07
adrenal gland, embryo E18.CNhs11026.1262-18F58.29
adrenal gland, neonate N00.CNhs11191.1311-23C111.05
adrenal gland, neonate N25.CNhs11223.1377-27I34.78
amnion, adult pregnant day17.5.CNhs10488.583-22A87.66
aorta, adult.CNhs10498.46-23H13.18
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F513.91
bone (os femoris), neonate N16.CNhs11225.1525-43A67.07
bone (os femoris), neonate N20.CNhs11195.1350-25C39.21
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B228.69
cerebellum, neonate N30.CNhs11135.1395-42I235.82
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C714.74
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D48.13
corpora quadrigemina, adult.CNhs10501.16-22A423.52
corpus striatum, adult.CNhs10487.19-21D815.56
corpus striatum, neonate N00.CNhs11226.630-43F156.17
cortex, adult.CNhs10473.12-14D511.12
cortex, neonate N30.CNhs11107.1392-42F217.13
diencephalon, adult.CNhs10482.20-12F218.91
diencephalon, neonate N30.CNhs11201.1388-42B217.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B117.21
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.71
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C626.41
eyeball, embryo E14.CNhs10521.399-16E222.99
eyeball, embryo E15.CNhs10593.426-16C924.49
eyeball, embryo E17.CNhs11023.1261-18D424.56
eyeball, neonate N00.CNhs11207.633-15C633.88
eyeball, neonate N01.CNhs11140.1532-43E725.88
eyeball, neonate N02.CNhs11205.1551-44G836.26
eyeball, neonate N16.CNhs11188.777-19A29.05
forelimb, embryo E11.CNhs10596.335-25E220.91
forelimb, embryo E12.CNhs10600.359-14H226.29
forelimb, embryo E13.CNhs10589.384-1E222.17
forelimb, embryo E14.CNhs10577.413-26A821.04
forelimb, embryo E15.CNhs11007.437-20E721.41
forelimb, embryo E17.CNhs10598.1517-43C418.11
forelimb, embryo E18.CNhs11008.1520-43B520.99
gonad, embryo E13.CNhs11044.1564-45I618.51
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.89
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.55
heart, embryo E11.CNhs10586.331-24E918.85
heart, embryo E12.CNhs11015.353-12F516.89
heart, embryo E13.CNhs11013.376-3I918.19
heart, embryo E14.CNhs10597.403-26D414.44
heart, embryo E15.CNhs11017.431-16C815.15
heart, embryo E16.CNhs11021.457-17C611.42
heart, embryo E17.CNhs11025.479-18E512.09
heart, embryo E18.CNhs11030.1283-20G310.73
heart, neonate N00.CNhs11213.639-21E310.04
heart, neonate N03.CNhs11221.1349-25I211.68
heart, neonate N10.CNhs11118.749-24G15.25
heart, neonate N16.CNhs11209.782-15G15.03
heart, neonate N20.CNhs11127.821-26I66.29
heart, neonate N25.CNhs11196.1351-25D35.49
heart, neonate N30.CNhs11202.1390-42D26.04
hippocampus, adult.CNhs10478.13-16E814.09
hippocampus, neonate N00.CNhs11228.627-43G145.28
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I526.45
intestine, embryo E13.CNhs11010.381-16D519.04
intestine, embryo E15.CNhs10602.976-16D89.79
intestine, embryo E16.CNhs10585.463-22H410.69
intestine, embryo E17.CNhs10582.482-18D38.45
intestine, embryo E18.CNhs10526.1289-20F76.28
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E94.61
intestine, neonate N06.CNhs11102.688-20B87.79
intestine, neonate N07.CNhs11095.720-20F25.17
intestine, neonate N10.CNhs11098.755-23A56.43
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I912.90
kidney, embryo E15.CNhs10997.434-16F813.14
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I29.57
kidney, embryo E18.CNhs11001.1288-20C713.38
kidney, neonate N00.CNhs11214.646-21G713.82
kidney, neonate N10.CNhs11206.758-6D59.86
kidney, neonate N20.CNhs11113.832-19I15.61
kidney, neonate N25.CNhs11122.1353-25F33.30
kidney, neonate N30.CNhs11203.1385-42H14.81
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F85.34
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B17.94
lung, embryo E12.CNhs10522.354-16G226.53
lung, embryo E14.CNhs10604.404-26F820.37
lung, embryo E15.CNhs11020.432-17C519.18
lung, embryo E16.CNhs10998.458-17B618.78
lung, embryo E17.CNhs10605.480-44A619.43
lung, embryo E18.CNhs10583.1287-20I614.76
lung, neonate N00.CNhs11224.640-42C626.54
lung, neonate N06.CNhs11212.683-20E523.49
lung, neonate N07.CNhs11111.715-19A322.81
lung, neonate N10.CNhs11219.750-23E626.31
lung, neonate N20.CNhs11109.822-18A412.29
lung, neonate N25.CNhs11119.1359-25C711.74
lung, neonate N30.CNhs11133.1394-42H211.86
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C217.82
medulla oblongata, neonate N30.CNhs11200.1396-42A320.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.05
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E114.51
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.54
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.90
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D722.46
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D825.84
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D926.33
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D422.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.95
olfactory brain, adult.CNhs10489.18-22I916.71
ovary, adult.CNhs10507.91-2I718.45
ovary, embryo E18.CNhs11040.505-44H717.27
ovary, neonate N00.CNhs11217.1299-22I417.75
oviduct, adult pregnant day01.CNhs10500.988-6G610.89
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F48.98
pancreas, embryo E15.CNhs11042.1556-45F28.77
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G37.97
pancreas, embryo E18.CNhs10580.1535-43I77.99
pancreas, neonate N00.CNhs11105.645-26G98.27
pancreas, neonate N01.CNhs11138.1531-43D77.27
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G88.51
pituitary gland, embryo E12.CNhs11018.346-16E628.63
pituitary gland, embryo E13.CNhs11009.370-44C725.35
pituitary gland, embryo E14.CNhs11037.398-44A521.86
pituitary gland, embryo E15.CNhs10592.427-16B920.39
pituitary gland, embryo E16.CNhs11036.449-43F622.65
pituitary gland, embryo E17.CNhs11039.1265-44F518.43
pituitary gland, neonate N00.CNhs11190.1308-22E916.14
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G38.26
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C315.17
skin, neonate N00.CNhs11124.650-25G419.86
skin, neonate N03.CNhs11215.662-22H313.21
skin, neonate N06.CNhs11097.693-20I519.34
skin, neonate N10.CNhs11108.762-6C422.49
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C917.99
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C113.83
spleen, embryo E18.CNhs11011.1271-21F28.15
spleen, neonate N10.CNhs11116.752-24D13.58
spleen, neonate N20.CNhs11112.824-19H12.46
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C615.47
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C915.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D318.10
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E322.14
stomach, embryo E15.CNhs10603.1252-16G817.08
stomach, embryo E16.CNhs11022.459-17D410.69
stomach, embryo E17.CNhs11006.1035-18D511.92
stomach, embryo E18.CNhs10999.1286-20C614.41
stomach, neonate N03.CNhs11193.1340-24B814.43
stomach, neonate N07.CNhs11210.718-18A912.40
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I12.33
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F515.70
testis, embryo E15.CNhs11034.443-27C518.37
testis, embryo E16.CNhs11033.470-26G514.39
testis, embryo E17.CNhs11029.486-18I515.89
testis, embryo E18.CNhs11027.503-18G516.22
testis, neonate N00.CNhs11189.1300-22B719.60
testis, neonate N07.CNhs11222.726-26I419.01
testis, neonate N10.CNhs11204.763-44D919.29
testis, neonate N20.CNhs11110.839-18H310.63
testis, neonate N30.CNhs11130.1391-42E28.93
thymus, adult.CNhs10471.38-12B56.64
thymus, embryo E14.CNhs11041.402-44I413.38
thymus, embryo E15.CNhs11005.430-45I213.04
thymus, embryo E16.CNhs11002.456-26C510.26
thymus, embryo E17.CNhs10581.478-18C110.56
thymus, embryo E18.CNhs10595.1273-19G47.55
thymus, neonate N02.CNhs11181.1541-43F87.33
thymus, neonate N03.CNhs11137.2104-43C74.58
thymus, neonate N06.CNhs11197.681-26C45.96
thymus, neonate N07.CNhs11211.713-19D36.33
thymus, neonate N10.CNhs11194.748-24E46.35
thymus, neonate N20.CNhs11186.820-7A26.53
thymus, neonate N25.CNhs11125.1362-25G76.93
thymus, neonate N30.CNhs11132.1393-42G27.71
tongue, adult.CNhs10499.32-1B414.96
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.20
urinary bladder, adult.CNhs10481.879-12E46.18
uterus, adult pregnant day19.CNhs10497.590-15F54.50
uterus, adult.CNhs10509.92-27E55.49
vagina, adult.CNhs10502.89-27D537.94
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.33
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.04
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.51
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.59
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A920.19
whole body, embryo E11.CNhs11014.324-5I827.30
whole body, embryo E12.CNhs10587.857-27C931.92
whole body, embryo E13.CNhs10512.372-23H231.59
whole body, embryo E14.5.CNhs10578.420-27D219.69
whole body, embryo E14.CNhs10519.395-14B116.98
whole body, embryo E16.CNhs10514.453-14F218.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G519.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G515.45
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.58
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G521.48
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.49
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G518.86
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.29
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.57
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G516.71
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G520.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.08
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G519.14
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G519.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G517.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G516.45
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.30
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G516.84
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G518.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G519.15
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G520.20
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G518.32
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.01
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.35
whole body, embryo E17.5.CNhs10513.490-9F920.06
whole body, embryo E17.CNhs10517.475-3I543.97
whole body, embryo E18.CNhs10516.493-3B319.65
whole body, neonate N00.CNhs10525.657-19C216.33
whole body, neonate N01.CNhs10576.659-23C616.64
whole body, neonate N06.CNhs10515.692-21D115.00
whole body, neonate N10.CNhs10518.761-6B49.27





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.44e-1533
neuronal stem cell2.44e-1533
neuroblast2.44e-1533
electrically signaling cell2.44e-1533
ectodermal cell1.24e-1344
neurectodermal cell1.24e-1344
neural cell2.53e-1343
electrically responsive cell9.00e-1339
electrically active cell9.00e-1339
CNS neuron (sensu Vertebrata)1.38e-1223
neuroblast (sensu Vertebrata)1.38e-1223

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure3.37e-2195
ectoderm3.37e-2195
presumptive ectoderm3.37e-2195
central nervous system1.61e-2073
nervous system1.92e-1975
ecto-epithelium1.44e-1773
neurectoderm1.74e-1764
neural plate1.74e-1764
presumptive neural plate1.74e-1764
neural tube8.01e-1552
neural rod8.01e-1552
future spinal cord8.01e-1552
neural keel8.01e-1552
regional part of nervous system1.07e-1454
structure with developmental contribution from neural crest7.92e-1492
pre-chordal neural plate2.89e-1249
brain8.82e-1247
future brain8.82e-1247
regional part of brain1.08e-1146
gray matter5.33e-1034
anterior neural tube6.67e-1040
regional part of forebrain1.75e-0939
forebrain1.75e-0939
future forebrain1.75e-0939
brain grey matter3.15e-0729
regional part of telencephalon3.15e-0729
telencephalon3.15e-0729
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