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FFCP PHASE1:Mm9::chr1:137271513..137271523,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=77552
|EntrezGene=77552
|HGNC=
|HGNC=
|MCL_coexpression_id=283
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=130bp_to_ENSMUST00000159181_5end
|association_with_transcript=130bp_to_ENSMUST00000159181_5end
|cluster_id=chr1:137271513..137271523,-
|description=CAGE_peak_8_at_Shisa4_5end
|description=CAGE_peak_8_at_Shisa4_5end
|id=chr1:137271513..137271523,-
|id=chr1:137271513..137271523,-
|ontology_enrichment_celltype=CL:0000221!3.57e-12!44;CL:0000133!3.57e-12!44;CL:0000055!8.89e-12!50;CL:0002319!1.05e-11!43;CL:0002453!1.27e-07!8;CL:0000333!1.58e-07!10;CL:0000095!1.58e-07!10;CL:0000243!1.58e-07!10;CL:0000123!1.58e-07!10;CL:0000125!1.58e-07!10;CL:0000030!1.58e-07!10;CL:0000339!1.58e-07!10;CL:0000393!3.76e-07!39;CL:0000211!3.76e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000221,1.06e-17,44;CL:0000133,1.06e-17,44;CL:0002319,9.96e-17,43;CL:0002453,5.45e-16,8;CL:0002321,3.44e-14,70;CL:0000333,2.02e-12,10;CL:0000095,2.02e-12,10;CL:0000243,2.02e-12,10;CL:0000123,2.02e-12,10;CL:0000125,2.02e-12,10;CL:0000030,2.02e-12,10;CL:0000339,2.02e-12,10;CL:0000128,2.59e-12,6;CL:0000126,2.59e-12,6;CL:0000127,2.59e-12,6;CL:0000117,1.18e-09,23;CL:0000337,1.18e-09,23;CL:0000393,1.47e-09,39;CL:0000211,1.47e-09,39;CL:0000540,5.40e-08,33;CL:0000047,5.40e-08,33;CL:0000031,5.40e-08,33;CL:0000404,5.40e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.86e-21!102;UBERON:0000924!3.86e-21!102;UBERON:0006601!3.86e-21!102;UBERON:0000073!1.68e-20!75;UBERON:0001016!1.68e-20!75;UBERON:0001017!4.38e-20!73;UBERON:0005743!4.38e-20!73;UBERON:0000033!6.86e-17!63;UBERON:0002346!4.61e-15!71;UBERON:0003075!4.61e-15!71;UBERON:0007284!4.61e-15!71;UBERON:0001049!2.44e-14!52;UBERON:0005068!2.44e-14!52;UBERON:0006241!2.44e-14!52;UBERON:0007135!2.44e-14!52;UBERON:0000955!2.19e-13!50;UBERON:0006238!2.19e-13!50;UBERON:0002616!6.20e-13!49;UBERON:0002020!2.17e-10!34;UBERON:0003056!7.57e-10!49;UBERON:0003076!2.31e-08!12;UBERON:0003057!2.31e-08!12;UBERON:0007811!2.93e-08!86;UBERON:0003080!4.90e-08!40;UBERON:0002791!6.60e-08!29;UBERON:0003528!6.60e-08!29;UBERON:0001893!6.60e-08!29;UBERON:0000153!8.28e-08!94;UBERON:0002780!1.51e-07!39;UBERON:0001890!1.51e-07!39;UBERON:0006240!1.51e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.15e-25,73;UBERON:0001016,1.00e-24,75;UBERON:0004121,2.79e-21,95;UBERON:0000924,2.79e-21,95;UBERON:0006601,2.79e-21,95;UBERON:0000073,4.12e-21,54;UBERON:0001049,1.22e-18,52;UBERON:0005068,1.22e-18,52;UBERON:0006241,1.22e-18,52;UBERON:0007135,1.22e-18,52;UBERON:0002346,3.32e-16,64;UBERON:0003075,3.32e-16,64;UBERON:0007284,3.32e-16,64;UBERON:0010371,2.35e-14,73;UBERON:0002020,3.40e-14,34;UBERON:0002616,9.41e-14,46;UBERON:0000955,2.46e-13,47;UBERON:0006238,2.46e-13,47;UBERON:0003076,6.42e-11,12;UBERON:0003057,6.42e-11,12;UBERON:0003528,1.48e-10,29;UBERON:0002791,1.48e-10,29;UBERON:0001893,1.48e-10,29;UBERON:0003080,4.51e-10,40;UBERON:0010314,8.10e-10,92;UBERON:0002780,3.80e-09,39;UBERON:0001890,3.80e-09,39;UBERON:0006240,3.80e-09,39;UBERON:0003056,2.36e-08,49;UBERON:0002950,7.26e-08,4;UBERON:0001891,7.26e-08,4;UBERON:0009616,7.26e-08,4;UBERON:0010286,7.26e-08,4;UBERON:0004111,8.24e-08,122;UBERON:0002420,1.99e-07,8;UBERON:0007245,1.99e-07,8;UBERON:0010009,1.99e-07,8;UBERON:0010011,1.99e-07,8;UBERON:0000454,1.99e-07,8;UBERON:0002240,6.44e-07,6;UBERON:0005174,6.44e-07,6;UBERON:0001137,6.44e-07,6
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,1.31790010585369,2.0190142737785,2.34717403304412,7.84890562969608,4.39372365468944,5.05517737593137,3.3596741190087,7.18762821824858,0,0,0,0.514518872071894,0,0,1.01158230429799,0,0,1.35537812827653,0.889294796111139,0,0,0,3.59520132622086,7.30014780110954,0.103689612308478,0.135005938331691,0.210324961351382,1.99955689082663,1.76694832761291,0,0,0,4.40463523997555,1.78762273319263,2.30409799884365,0.659431438650969,1.09785172322892,1.04182674111352,5.30447698102624,1.68828783009504,2.75036845998258,1.17851434189467,1.42371680799103,0.931997229126503,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.702222100658759,1.36344258062446,2.07828803682295,1.7666978725517,1.12674735821344,1.28326477414318,2.54805239706646,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0.289198713839823,0.884610551949874,0.161766849947409,0.662524555381181,0.484875253135222,0,0.878342391034642,0.628340120440365,0,0,0,0,1.79748767285787,2.74500361691176,0,2.25971616249959,2.55715457330331,1.66230435647648,1.46017136760982,0.203678727700633,0,0,0.210441855886474,0.650602214813519,0.689706313300419,1.26043490863744,0.30140963567143,0.340182495756639,0.12811372028485,0.187403449119458,0.776110112217047,0.646703978798527,0.189106080167819,0,0.43839146485515,0,0,0.411564272815887,0,0,0,0,0.207125772535502,0.469052119962192,0,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0.162137619091711,0,0,0,2.3131894342054,0.308713837137853,0,0,0.213288250535234,0.928946687441754,0,0,0,0,0,0,0.502670417600539,0,0,0,0.216138049874694,0,0.758671603812327,0.456994050438915,0,0.407302655690628,0.581857461502877,0.210407459670956,0.316182685621286,0.442830443938806,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.568474235311454,0,0.339490171550376,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0.491764273019036,0,2.72936002979246,2.93029216480508,0.983609672260053,1.26235463602186,0,1.17131623288992,0.215423397732799,1.67278158566786,0.222798674082394,0.566153061577665,0,0.292255857911312,0.790575555893047,0.963963949265421,0.283880170416537,0.35613120733451,0.162886959353576,0.164970122972535,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0,2.59595422814714,0,0.412773735926445,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0.134864346384821,0.247960367176008,0.523511883968059,0,2.4853572523477,0,0.149516546043979,0,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.443971906748129,0,0.167884616364078,0.579568782096571,0.187682475451182,0,0,2.50786052017682,0,1.84130094602871,0.572895513439397,1.3748254587495,0.685082519770642,0.755393897389701,2.02506750069542,1.35096360967266,3.17199686288943,0.51776031175182,0.31136204275253,0.798049746802062,0.341467211508268,0,0.419226325255965,0,0.44449345560323,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.128050304809739,0.34461281373368,0.476293691283074,0.115884325944855,0,0,0,0.342869252385415,0.532427418478012,0,0.290692833264657,0.188218760830661,0.169229215783353,0,0,0.407412341537585,0,0.118635018124174,0,0,0.77468420592983,0,0.249810577937946,0,0,0.191288332068843,1.32354851471709,0.695603506861264
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,1.31790010585369,2.0190142737785,2.34717403304412,7.84890562969608,4.39372365468944,5.05517737593137,3.3596741190087,7.18762821824858,0,0,0,0.514518872071894,0,0,1.01158230429799,0,0,1.35537812827653,0.889294796111139,0,0,0,3.59520132622086,7.30014780110954,0.103689612308478,0.135005938331691,0.210324961351382,1.99955689082663,1.76694832761291,0,0,0,4.40463523997555,1.78762273319263,2.30409799884365,0.659431438650969,1.09785172322892,1.04182674111352,5.30447698102624,1.68828783009504,2.75036845998258,1.17851434189467,1.42371680799103,0.931997229126503,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.702222100658759,1.36344258062446,2.07828803682295,1.7666978725517,1.12674735821344,1.28326477414318,2.54805239706646,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0.289198713839823,0.884610551949874,0.161766849947409,0.662524555381181,0.484875253135222,0,0.878342391034642,0.628340120440365,0,0,0,0,1.79748767285787,2.74500361691176,0,2.25971616249959,2.55715457330331,1.66230435647648,1.46017136760982,0.203678727700633,0,0,0.210441855886474,0.650602214813519,0.689706313300419,1.26043490863744,0.30140963567143,0.340182495756639,0.12811372028485,0.187403449119458,0.776110112217047,0.646703978798527,0.189106080167819,0,0.43839146485515,0,0,0.411564272815887,0,0,0,0,0.207125772535502,0.469052119962192,0,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0.162137619091711,0,0,0,2.3131894342054,0.308713837137853,0,0,0.213288250535234,0.928946687441754,0,0,0,0,0,0,0.502670417600539,0,0,0,0.216138049874694,0,0.758671603812327,0.456994050438915,0,0.407302655690628,0.581857461502877,0.210407459670956,0.316182685621286,0.442830443938806,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.568474235311454,0,0.339490171550376,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0.491764273019036,0,2.72936002979246,2.93029216480508,0.983609672260053,1.26235463602186,0,1.17131623288992,0.215423397732799,1.67278158566786,0.222798674082394,0.566153061577665,0,0.292255857911312,0.790575555893047,0.963963949265421,0.283880170416537,0.35613120733451,0.162886959353576,0.164970122972535,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0,2.59595422814714,0,0.412773735926445,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0.134864346384821,0.247960367176008,0.523511883968059,0,2.4853572523477,0,0.149516546043979,0,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.443971906748129,0,0.167884616364078,0.579568782096571,0.187682475451182,0,0,2.50786052017682,0,1.84130094602871,0.572895513439397,1.3748254587495,0.685082519770642,0.755393897389701,2.02506750069542,1.35096360967266,3.17199686288943,0.51776031175182,0.31136204275253,0.798049746802062,0.341467211508268,0,0.419226325255965,0,0.44449345560323,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.128050304809739,0.34461281373368,0.476293691283074,0.115884325944855,0,0,0,0.342869252385415,0.532427418478012,0,0.290692833264657,0.188218760830661,0.169229215783353,0,0,0.407412341537585,0,0.118635018124174,0,0,0.77468420592983,0,0.249810577937946,0,0,0.191288332068843,1.32354851471709,0.695603506861264
|short_description=p8@Shisa4
|short_description=p8@Shisa4
}}
}}

Latest revision as of 10:42, 26 September 2015

Short description:p8@Shisa4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Shisa4_5end
Coexpression cluster:MCL_coexpression_mm9:283
Association with transcript: 130bp_to_ENSMUST00000159181_5end
EntrezGene:Shisa4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Shisa4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.85
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.39
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.06
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A32.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.15e-2573
nervous system1.00e-2475
ectoderm-derived structure2.79e-2195
ectoderm2.79e-2195
presumptive ectoderm2.79e-2195
regional part of nervous system4.12e-2154
neural tube1.22e-1852
neural rod1.22e-1852
future spinal cord1.22e-1852
neural keel1.22e-1852
neurectoderm3.32e-1664
neural plate3.32e-1664
presumptive neural plate3.32e-1664
ecto-epithelium2.35e-1473
gray matter3.40e-1434
regional part of brain9.41e-1446
brain2.46e-1347
future brain2.46e-1347
posterior neural tube6.42e-1112
chordal neural plate6.42e-1112
brain grey matter1.48e-1029
regional part of telencephalon1.48e-1029
telencephalon1.48e-1029
anterior neural tube4.51e-1040
structure with developmental contribution from neural crest8.10e-1092
regional part of forebrain3.80e-0939
forebrain3.80e-0939
future forebrain3.80e-0939
pre-chordal neural plate2.36e-0849
regional part of midbrain7.26e-084
midbrain7.26e-084
presumptive midbrain7.26e-084
midbrain neural tube7.26e-084
anatomical conduit8.24e-08122
basal ganglion1.99e-078
nuclear complex of neuraxis1.99e-078
aggregate regional part of brain1.99e-078
collection of basal ganglia1.99e-078
cerebral subcortex1.99e-078
spinal cord6.44e-076
dorsal region element6.44e-076
dorsum6.44e-076
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