FFCP PHASE1:Mm9::chr6:103460954..103461002,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12661 | |EntrezGene=12661 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1203 | |MCL_coexpression_id=1203 | ||
|TSSclassifier=NA | |||
|UniProt=E9QMU6,A2RRK1,E9QL95,P70232 | |UniProt=E9QMU6,A2RRK1,E9QL95,P70232 | ||
|association_with_transcript=84bp_to_ENSMUST00000032163,ENSMUST00000066905,ENSMUST00000089225,NM_007697,uc009dcj.1,uc009dck.1_5end | |association_with_transcript=84bp_to_ENSMUST00000032163,ENSMUST00000066905,ENSMUST00000089225,NM_007697,uc009dcj.1,uc009dck.1_5end | ||
|cluster_id=chr6:103460954..103461002,+ | |||
|description=CAGE_peak_5_at_Chl1_5end | |description=CAGE_peak_5_at_Chl1_5end | ||
|id=chr6:103460954..103461002,+ | |id=chr6:103460954..103461002,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.44e-19!33;CL:0000047!1.44e-19!33;CL:0000031!1.44e-19!33;CL:0000404!1.44e-19!33;CL:0002319!3.88e-19!43;CL:0000221!4.46e-19!44;CL:0000133!4.46e-19!44;CL:0000393!1.42e-13!39;CL:0000211!1.42e-13!39;CL:0000055!2.35e-13!50;CL:0000117!2.93e-13!23;CL:0000337!2.93e-13!23;CL:0000107!2.16e-07!9 | |ontology_enrichment_celltype=CL:0000540!1.44e-19!33;CL:0000047!1.44e-19!33;CL:0000031!1.44e-19!33;CL:0000404!1.44e-19!33;CL:0002319!3.88e-19!43;CL:0000221!4.46e-19!44;CL:0000133!4.46e-19!44;CL:0000393!1.42e-13!39;CL:0000211!1.42e-13!39;CL:0000055!2.35e-13!50;CL:0000117!2.93e-13!23;CL:0000337!2.93e-13!23;CL:0000107!2.16e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.44e-25,33;CL:0000047,8.44e-25,33;CL:0000031,8.44e-25,33;CL:0000404,8.44e-25,33;CL:0002319,6.46e-22,43;CL:0000221,4.61e-21,44;CL:0000133,4.61e-21,44;CL:0000393,8.19e-19,39;CL:0000211,8.19e-19,39;CL:0000117,1.19e-16,23;CL:0000337,1.19e-16,23;CL:0000107,4.36e-09,9;CL:0002321,4.60e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.25e-33!75;UBERON:0001016!5.25e-33!75;UBERON:0001017!4.51e-32!73;UBERON:0005743!4.51e-32!73;UBERON:0004121!3.53e-31!102;UBERON:0000924!3.53e-31!102;UBERON:0006601!3.53e-31!102;UBERON:0001049!8.91e-21!52;UBERON:0005068!8.91e-21!52;UBERON:0006241!8.91e-21!52;UBERON:0007135!8.91e-21!52;UBERON:0002346!1.25e-20!71;UBERON:0003075!1.25e-20!71;UBERON:0007284!1.25e-20!71;UBERON:0002020!1.20e-19!34;UBERON:0000955!7.64e-19!50;UBERON:0006238!7.64e-19!50;UBERON:0002616!1.50e-18!49;UBERON:0000033!4.54e-18!63;UBERON:0002791!1.99e-16!29;UBERON:0003528!1.99e-16!29;UBERON:0001893!1.99e-16!29;UBERON:0003080!8.73e-16!40;UBERON:0002780!2.99e-15!39;UBERON:0001890!2.99e-15!39;UBERON:0006240!2.99e-15!39;UBERON:0003056!5.79e-15!49;UBERON:0000956!2.51e-12!21;UBERON:0001869!2.51e-12!21;UBERON:0000203!2.51e-12!21;UBERON:0002619!4.31e-10!17;UBERON:0007811!7.45e-10!86;UBERON:0000153!1.36e-09!94;UBERON:0000010!5.76e-08!11;UBERON:0002021!1.13e-07!10;UBERON:0000411!1.13e-07!10;UBERON:0001950!1.13e-07!10;UBERON:0002410!2.16e-07!9 | |ontology_enrichment_uberon=UBERON:0000073!5.25e-33!75;UBERON:0001016!5.25e-33!75;UBERON:0001017!4.51e-32!73;UBERON:0005743!4.51e-32!73;UBERON:0004121!3.53e-31!102;UBERON:0000924!3.53e-31!102;UBERON:0006601!3.53e-31!102;UBERON:0001049!8.91e-21!52;UBERON:0005068!8.91e-21!52;UBERON:0006241!8.91e-21!52;UBERON:0007135!8.91e-21!52;UBERON:0002346!1.25e-20!71;UBERON:0003075!1.25e-20!71;UBERON:0007284!1.25e-20!71;UBERON:0002020!1.20e-19!34;UBERON:0000955!7.64e-19!50;UBERON:0006238!7.64e-19!50;UBERON:0002616!1.50e-18!49;UBERON:0000033!4.54e-18!63;UBERON:0002791!1.99e-16!29;UBERON:0003528!1.99e-16!29;UBERON:0001893!1.99e-16!29;UBERON:0003080!8.73e-16!40;UBERON:0002780!2.99e-15!39;UBERON:0001890!2.99e-15!39;UBERON:0006240!2.99e-15!39;UBERON:0003056!5.79e-15!49;UBERON:0000956!2.51e-12!21;UBERON:0001869!2.51e-12!21;UBERON:0000203!2.51e-12!21;UBERON:0002619!4.31e-10!17;UBERON:0007811!7.45e-10!86;UBERON:0000153!1.36e-09!94;UBERON:0000010!5.76e-08!11;UBERON:0002021!1.13e-07!10;UBERON:0000411!1.13e-07!10;UBERON:0001950!1.13e-07!10;UBERON:0002410!2.16e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.37e-38,75;UBERON:0001017,1.13e-36,73;UBERON:0004121,2.41e-32,95;UBERON:0000924,2.41e-32,95;UBERON:0006601,2.41e-32,95;UBERON:0000073,6.39e-25,54;UBERON:0002020,7.30e-24,34;UBERON:0001049,1.25e-23,52;UBERON:0005068,1.25e-23,52;UBERON:0006241,1.25e-23,52;UBERON:0007135,1.25e-23,52;UBERON:0002346,6.10e-22,64;UBERON:0003075,6.10e-22,64;UBERON:0007284,6.10e-22,64;UBERON:0010371,1.55e-21,73;UBERON:0003528,9.87e-20,29;UBERON:0002791,9.87e-20,29;UBERON:0001893,9.87e-20,29;UBERON:0000955,2.67e-19,47;UBERON:0006238,2.67e-19,47;UBERON:0002616,6.26e-19,46;UBERON:0003080,1.80e-17,40;UBERON:0002780,8.38e-17,39;UBERON:0001890,8.38e-17,39;UBERON:0006240,8.38e-17,39;UBERON:0000956,1.89e-14,21;UBERON:0001869,1.89e-14,21;UBERON:0000203,1.89e-14,21;UBERON:0003056,5.95e-14,49;UBERON:0002619,1.38e-11,17;UBERON:0010314,4.48e-11,92;UBERON:0000010,7.96e-10,11;UBERON:0002021,1.89e-09,10;UBERON:0000411,1.89e-09,10;UBERON:0001950,1.89e-09,10;UBERON:0002410,4.36e-09,9;UBERON:0003076,8.67e-07,12;UBERON:0003057,8.67e-07,12 | |||
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.878744730937887,1.94429899074283,0.139986421625363,5.75010257459886,0,0,0,0,0,0,7.08107613008592,6.87688273053643,7.60597684207415,0.338844532069132,0,0,0,0,0.599200221036809,3.07374644257244,12.7538223139428,6.88530285491622,6.09942387919008,7.14127461009509,5.74258206474195,5.63457676388789,3.06705507258356,5.51531271966013,3.30347642998166,8.42736431362239,7.37311359629969,5.80299666012853,9.14876436024097,7.8137005583514,6.14202597803038,8.4414391504752,8.09830713217094,17.3830865429464,25.3421591822403,9.87917062874093,1.06016670666458,14.6608826607164,0,0,0.679971333707751,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0,0.608930956624282,0.230615497256059,0.452167921657868,0.470354828542819,0.502666365318702,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,1.86391761218122,13.1751358655196,14.4518227701284,0,0,0,0,6.89036941262184,2.74500361691176,8.16753288733619,10.2556348913443,9.2057564638919,4.98691306942944,6.32740925964255,0.203678727700633,0.248813941220186,0,0.631325567659422,0,0.459804208866946,0.180062129805349,1.05493372485001,0.95251098811859,1.0249097622788,1.12442069471675,0.776110112217047,0.215567992932842,0,0.351902248327898,0.43839146485515,0.278047249225598,3.1342694986995,2.26360350048738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,13.6688466566683,28.0929591795446,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0,0.444756087689741,0.951128130562796,0.474529061544512,0.988193728344065,1.50801125280162,0.994782360205754,1.9496408711912,0,0.432276099749388,1.1948476395262,0,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0,0,0,0,0.491764273019036,0,7.70642831941401,5.50894926983355,0,0,6.62567260774139,5.0757036758563,14.8642144435631,23.8968797952552,26.9586395639697,23.4953520554731,18.2164815753702,15.4895604692995,24.903130010631,2.89189184779626,0,0.35613120733451,0.488660878060728,0,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,1.05418608574999,1.03135543248187,1.36175842301515,0,0,1.28602221018955,0.532020700926821,0.891844088010353,1.48094118541909,0.304464949114599,0,0,0.661585194164886,5.44124634706884,3.22928853391811,2.29189114726992,0.716234064018819,2.1338316966858,0.874442509889552,7.04616147639937,0,0.206386867963223,0,0,0.136694227721025,0,0,0.279902904647316,0.138199973804424,0,0,2.23651413839534,1.62008011232702,2.50905955217362,3.71216358368502,1.75323650300267,2.23164330458407,1.83229159388821,0.518459893167171,0,0,0,0,0,0.258319646955462,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.240390899039938,0.295379054349154,0.201932899896295,0.15241361331,0.100826185136841,0.487289403698762,0.192423683280659,0.116876902181569,4.30787728868902,0,0,0,0.965947970160952,0,0,2.14368379079066,0,15.2482997506608,11.9684561491866,12.6037012956667,15.1230800462445,8.90607275701835,6.7985450765073,13.5004500046361,10.8077088773813,11.7817026335893,10.8729665467882,0.103787347584177,1.19707462020309,1.02440163452481,3.40349403895612,1.25767897576789,2.20612210140017,4.00044110042907,2.06035057238894,3.20919209591815,4.04315538822076,3.8021894983536,3.2066478035633,2.99652823903624,3.84150914429216,2.92920891673628,2.85776214769844,2.66533949673168,1.73618298417335,2.47251540481984,3.09117732282234,2.05721551431249,4.43689515398344,2.38436189947321,3.34296758254356,3.95259397744389,2.36920902096694,2.92684756596436,3.6829759601298,2.98769050460896,1.12228454331548,4.62676570684279,3.74317033027141,4.09231043169689,2.94379998253335,3.66522560864169,4.24677982494508,3.04111090979031,3.43793686477277,1.14772999241306,1.10295709559758,0.463735671240843 | |phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.878744730937887,1.94429899074283,0.139986421625363,5.75010257459886,0,0,0,0,0,0,7.08107613008592,6.87688273053643,7.60597684207415,0.338844532069132,0,0,0,0,0.599200221036809,3.07374644257244,12.7538223139428,6.88530285491622,6.09942387919008,7.14127461009509,5.74258206474195,5.63457676388789,3.06705507258356,5.51531271966013,3.30347642998166,8.42736431362239,7.37311359629969,5.80299666012853,9.14876436024097,7.8137005583514,6.14202597803038,8.4414391504752,8.09830713217094,17.3830865429464,25.3421591822403,9.87917062874093,1.06016670666458,14.6608826607164,0,0,0.679971333707751,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0,0.608930956624282,0.230615497256059,0.452167921657868,0.470354828542819,0.502666365318702,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,1.86391761218122,13.1751358655196,14.4518227701284,0,0,0,0,6.89036941262184,2.74500361691176,8.16753288733619,10.2556348913443,9.2057564638919,4.98691306942944,6.32740925964255,0.203678727700633,0.248813941220186,0,0.631325567659422,0,0.459804208866946,0.180062129805349,1.05493372485001,0.95251098811859,1.0249097622788,1.12442069471675,0.776110112217047,0.215567992932842,0,0.351902248327898,0.43839146485515,0.278047249225598,3.1342694986995,2.26360350048738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,13.6688466566683,28.0929591795446,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0,0.444756087689741,0.951128130562796,0.474529061544512,0.988193728344065,1.50801125280162,0.994782360205754,1.9496408711912,0,0.432276099749388,1.1948476395262,0,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0,0,0,0,0.491764273019036,0,7.70642831941401,5.50894926983355,0,0,6.62567260774139,5.0757036758563,14.8642144435631,23.8968797952552,26.9586395639697,23.4953520554731,18.2164815753702,15.4895604692995,24.903130010631,2.89189184779626,0,0.35613120733451,0.488660878060728,0,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,1.05418608574999,1.03135543248187,1.36175842301515,0,0,1.28602221018955,0.532020700926821,0.891844088010353,1.48094118541909,0.304464949114599,0,0,0.661585194164886,5.44124634706884,3.22928853391811,2.29189114726992,0.716234064018819,2.1338316966858,0.874442509889552,7.04616147639937,0,0.206386867963223,0,0,0.136694227721025,0,0,0.279902904647316,0.138199973804424,0,0,2.23651413839534,1.62008011232702,2.50905955217362,3.71216358368502,1.75323650300267,2.23164330458407,1.83229159388821,0.518459893167171,0,0,0,0,0,0.258319646955462,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.240390899039938,0.295379054349154,0.201932899896295,0.15241361331,0.100826185136841,0.487289403698762,0.192423683280659,0.116876902181569,4.30787728868902,0,0,0,0.965947970160952,0,0,2.14368379079066,0,15.2482997506608,11.9684561491866,12.6037012956667,15.1230800462445,8.90607275701835,6.7985450765073,13.5004500046361,10.8077088773813,11.7817026335893,10.8729665467882,0.103787347584177,1.19707462020309,1.02440163452481,3.40349403895612,1.25767897576789,2.20612210140017,4.00044110042907,2.06035057238894,3.20919209591815,4.04315538822076,3.8021894983536,3.2066478035633,2.99652823903624,3.84150914429216,2.92920891673628,2.85776214769844,2.66533949673168,1.73618298417335,2.47251540481984,3.09117732282234,2.05721551431249,4.43689515398344,2.38436189947321,3.34296758254356,3.95259397744389,2.36920902096694,2.92684756596436,3.6829759601298,2.98769050460896,1.12228454331548,4.62676570684279,3.74317033027141,4.09231043169689,2.94379998253335,3.66522560864169,4.24677982494508,3.04111090979031,3.43793686477277,1.14772999241306,1.10295709559758,0.463735671240843 | ||
|short_description=p5@Chl1 | |short_description=p5@Chl1 | ||
}} | }} |
Latest revision as of 10:27, 26 September 2015
Short description: | p5@Chl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Chl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1203 |
Association with transcript: | 84bp_to_ENSMUST00000032163, ENSMUST00000066905, ENSMUST00000089225, NM_007697, uc009dcj.1, uc009dck.1_5end |
EntrezGene: | Chl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.44e-25 | 33 |
neuronal stem cell | 8.44e-25 | 33 |
neuroblast | 8.44e-25 | 33 |
electrically signaling cell | 8.44e-25 | 33 |
neural cell | 6.46e-22 | 43 |
ectodermal cell | 4.61e-21 | 44 |
neurectodermal cell | 4.61e-21 | 44 |
electrically responsive cell | 8.19e-19 | 39 |
electrically active cell | 8.19e-19 | 39 |
CNS neuron (sensu Vertebrata) | 1.19e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.19e-16 | 23 |
autonomic neuron | 4.36e-09 | 9 |
embryonic cell | 4.60e-08 | 70 |