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FFCP PHASE1:Mm9::chr7:26022885..26022896,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=606496
|EntrezGene=606496
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=Q2NL51,D3Z7E5
|UniProt=Q2NL51,D3Z7E5
|association_with_transcript=-15bp_to_ENSMUST00000071739,ENSMUST00000108411,NM_001031667,uc009frx.1_5end
|association_with_transcript=-15bp_to_ENSMUST00000071739,ENSMUST00000108411,NM_001031667,uc009frx.1_5end
|cluster_id=chr7:26022885..26022896,-
|description=CAGE_peak_3_at_Gsk3a_5end
|description=CAGE_peak_3_at_Gsk3a_5end
|id=chr7:26022885..26022896,-
|id=chr7:26022885..26022896,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002453,7.77e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!6.59e-12!102;UBERON:0000924!6.59e-12!102;UBERON:0006601!6.59e-12!102;UBERON:0000073!6.90e-11!75;UBERON:0001016!6.90e-11!75;UBERON:0001017!1.91e-10!73;UBERON:0005743!1.91e-10!73;UBERON:0001049!1.09e-09!52;UBERON:0005068!1.09e-09!52;UBERON:0006241!1.09e-09!52;UBERON:0007135!1.09e-09!52;UBERON:0002346!1.47e-09!71;UBERON:0003075!1.47e-09!71;UBERON:0007284!1.47e-09!71;UBERON:0002020!8.80e-09!34;UBERON:0000033!1.25e-07!63;UBERON:0000955!2.08e-07!50;UBERON:0006238!2.08e-07!50;UBERON:0002616!3.99e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.05e-13,73;UBERON:0001016,8.14e-13,75;UBERON:0001049,2.08e-12,52;UBERON:0005068,2.08e-12,52;UBERON:0006241,2.08e-12,52;UBERON:0007135,2.08e-12,52;UBERON:0000073,9.34e-12,54;UBERON:0002020,5.81e-11,34;UBERON:0002021,7.89e-10,10;UBERON:0000411,7.89e-10,10;UBERON:0001950,7.89e-10,10;UBERON:0004121,8.61e-10,95;UBERON:0000924,8.61e-10,95;UBERON:0006601,8.61e-10,95;UBERON:0002619,8.87e-10,17;UBERON:0002346,1.08e-09,64;UBERON:0003075,1.08e-09,64;UBERON:0007284,1.08e-09,64;UBERON:0002616,9.60e-09,46;UBERON:0000955,1.92e-08,47;UBERON:0006238,1.92e-08,47;UBERON:0003528,8.65e-08,29;UBERON:0002791,8.65e-08,29;UBERON:0001893,8.65e-08,29;UBERON:0010371,1.21e-07,73;UBERON:0000956,2.28e-07,21;UBERON:0001869,2.28e-07,21;UBERON:0000203,2.28e-07,21;UBERON:0003080,2.59e-07,40;UBERON:0003076,7.09e-07,12;UBERON:0003057,7.09e-07,12
|phase1_expression=0,1.74487703819681,0.909998478779072,0.90739263392049,0.500895729946347,0.839396359559449,0.233612640595526,0.258246646883153,0.281577444303333,0,0.34243593645101,0.239316476986009,0.171200729931206,0,0.333109761815663,0.404950534779652,0,0,0,0,2.46625541438102,0.695036658406197,0,0.319984845586813,0,1.14846392823004,1.29228598847722,0.861884930743556,0.190023419456374,0.252030129759931,0,1.90509202037889,0.61506478758457,0,0,0.166234645358492,0.204169356262369,0,0.7813353445238,0.523523743973798,0,0.683045484958446,1.45653105909346,0.251793635951155,0.304130793658544,0.183546752161682,2.34717403304412,1.74420125104357,1.75748946187577,0.972149495371417,1.53985063787899,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,1.90149421051854,0.338844532069132,0,0,0,0.7104801149461,1.79760066311043,2.30530983192933,0.207379224616955,0.540023753326763,0.210324961351382,2.28520787523043,1.54607978666129,0.734944795289724,0.287536413054709,0,0,1.27687338085188,0.614426133024974,1.45074916503213,0.640413505216868,0,1.67509799400829,0.56276261003168,0.763991238884051,2.65165726926301,1.13897344639282,0.931997229126503,0.681535739998656,0.906858721281426,0.289864488701678,0.860423876981386,0,0,0.649776417447669,0,0.702222100658759,0.340860645156116,0,0.35333957451034,0.422530259330042,0,2.54805239706646,0,0.432982082022428,0.506719730950197,1.01104889002957,0.68510327831436,0,0.445326417194474,1.04091196059682,0.304465478312141,0.922461989024234,0.753613202763113,0.23517741427141,0.376999773989026,0.741584903203122,0.578397427679647,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0.585561594023094,0.628340120440365,0.255457055208591,0.359445373517761,0,0.508280908292259,1.19832511523858,0.915001205637253,1.63350657746724,0.695297280769106,1.27857728665165,0.41557608911912,1.29793010454206,0.611036183101898,0.373220911830279,0.758168275301024,0.420883711772948,0.650602214813519,0.689706313300419,0.360124259610698,0.452114453507145,0.612328492361951,0.2562274405697,0.937017245597288,1.29351685369508,0,1.13463648100692,1.05570674498369,0.43839146485515,0.556094498451196,1.0447564995665,0,0.59710280045548,0,0.257347907114715,0.284163499395593,0.414251545071004,0.469052119962192,0.720248245844059,0.473489471170421,0.590292695242212,0.462801338662135,0.232533944750408,0.268273401399619,0.467061369468678,0.329119699826961,0.492502392237286,0.243206428637567,0.292399974850665,0.219550115291051,0.402619256281115,1.89260953707715,1.85228302282712,0,0.264450566663544,0.853153002140936,0,0.38660238396628,0.605050573870028,0.444756087689741,0.570676878337677,0.474529061544512,0.329397909448022,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.758671603812327,0.456994050438915,1.1270773567308,0.203651327845314,0.193952487167626,0.280543279561274,0.505892296994058,0.295220295959204,0.31399745568275,0.370191491765402,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,1.01430060694251,1.68824011826692,0.763877555344259,0.863088412352432,0,0.549122826376163,1.43768206527355,0,0,0,0.179397413521912,0.964887042726734,0.184753190166605,0.37898282354097,0.651859905768103,0.339490171550376,0.704070744865506,0.335012514883631,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.478364305972461,0.655453258862952,0.345369963731791,0.433947175744535,0,0,0,0.551873492609465,1.44495530989013,0.937693492737625,0.819674726883377,0.252470927204373,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0.668396022247182,0.849229592366497,0,0.584511715822624,0.790575555893047,0.963963949265421,0.283880170416537,1.6025904330053,0.81443479676788,0.494910368917606,0,0.971122544619926,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0.388076051348264,0.214337035031592,0.532020700926821,0.356737635204141,0.164549020602121,1.8267896946876,0.23467170806371,0.847328283455281,0,0.32977250588296,0.484393280087717,0.603129249281559,0.596861720015682,0.656563598980245,1.1659233465194,1.11255181206306,0.341741761595705,0.82554747185289,0.370389054739423,0.188368457004691,0.820165366326151,0.457556346413045,0.339956859987711,0.139951452323658,0.414599921413271,0,0.632671987162271,0.813277868507395,0.108005340821801,0,0,0,0.41326727862668,0,0.129614973291793,0.621339313086926,7.89170114157866,1.04661582230785,0.992750942742586,0.583353565032143,1.03327858782185,0.168956125490778,0.234714477291508,0.651021924219751,1.25831213310853,5.31485065817213,10.3690802252832,1.26404448251271,0.202725215290164,1.02710957164827,0.25984164595559,0.716106782669926,0.596044064343795,1.08175904567972,0.443068581523732,0.302899349844443,0.457240839929999,0.806609481094724,0.194915761479505,0.481059208201647,0.233753804363138,1.13365191807606,0.665957860122194,1.25599399253266,0.503653849092235,0.386379188064381,0.750729901804728,0.36630324853453,0.643105137237198,0,2.25900737046827,0.920650473014354,3.43737308063638,1.54667864109319,1.37016503954128,2.2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|phase1_expression=0,1.74487703819681,0.909998478779072,0.90739263392049,0.500895729946347,0.839396359559449,0.233612640595526,0.258246646883153,0.281577444303333,0,0.34243593645101,0.239316476986009,0.171200729931206,0,0.333109761815663,0.404950534779652,0,0,0,0,2.46625541438102,0.695036658406197,0,0.319984845586813,0,1.14846392823004,1.29228598847722,0.861884930743556,0.190023419456374,0.252030129759931,0,1.90509202037889,0.61506478758457,0,0,0.166234645358492,0.204169356262369,0,0.7813353445238,0.523523743973798,0,0.683045484958446,1.45653105909346,0.251793635951155,0.304130793658544,0.183546752161682,2.34717403304412,1.74420125104357,1.75748946187577,0.972149495371417,1.53985063787899,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,1.90149421051854,0.338844532069132,0,0,0,0.7104801149461,1.79760066311043,2.30530983192933,0.207379224616955,0.540023753326763,0.210324961351382,2.28520787523043,1.54607978666129,0.734944795289724,0.287536413054709,0,0,1.27687338085188,0.614426133024974,1.45074916503213,0.640413505216868,0,1.67509799400829,0.56276261003168,0.763991238884051,2.65165726926301,1.13897344639282,0.931997229126503,0.681535739998656,0.906858721281426,0.289864488701678,0.860423876981386,0,0,0.649776417447669,0,0.702222100658759,0.340860645156116,0,0.35333957451034,0.422530259330042,0,2.54805239706646,0,0.432982082022428,0.506719730950197,1.01104889002957,0.68510327831436,0,0.445326417194474,1.04091196059682,0.304465478312141,0.922461989024234,0.753613202763113,0.23517741427141,0.376999773989026,0.741584903203122,0.578397427679647,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0.585561594023094,0.628340120440365,0.255457055208591,0.359445373517761,0,0.508280908292259,1.19832511523858,0.915001205637253,1.63350657746724,0.695297280769106,1.27857728665165,0.41557608911912,1.29793010454206,0.611036183101898,0.373220911830279,0.758168275301024,0.420883711772948,0.650602214813519,0.689706313300419,0.360124259610698,0.452114453507145,0.612328492361951,0.2562274405697,0.937017245597288,1.29351685369508,0,1.13463648100692,1.05570674498369,0.43839146485515,0.556094498451196,1.0447564995665,0,0.59710280045548,0,0.257347907114715,0.284163499395593,0.414251545071004,0.469052119962192,0.720248245844059,0.473489471170421,0.590292695242212,0.462801338662135,0.232533944750408,0.268273401399619,0.467061369468678,0.329119699826961,0.492502392237286,0.243206428637567,0.292399974850665,0.219550115291051,0.402619256281115,1.89260953707715,1.85228302282712,0,0.264450566663544,0.853153002140936,0,0.38660238396628,0.605050573870028,0.444756087689741,0.570676878337677,0.474529061544512,0.329397909448022,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.758671603812327,0.456994050438915,1.1270773567308,0.203651327845314,0.193952487167626,0.280543279561274,0.505892296994058,0.295220295959204,0.31399745568275,0.370191491765402,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,1.01430060694251,1.68824011826692,0.763877555344259,0.863088412352432,0,0.549122826376163,1.43768206527355,0,0,0,0.179397413521912,0.964887042726734,0.184753190166605,0.37898282354097,0.651859905768103,0.339490171550376,0.704070744865506,0.335012514883631,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.478364305972461,0.655453258862952,0.345369963731791,0.433947175744535,0,0,0,0.551873492609465,1.44495530989013,0.937693492737625,0.819674726883377,0.252470927204373,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0.668396022247182,0.849229592366497,0,0.584511715822624,0.790575555893047,0.963963949265421,0.283880170416537,1.6025904330053,0.81443479676788,0.494910368917606,0,0.971122544619926,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0.388076051348264,0.214337035031592,0.532020700926821,0.356737635204141,0.164549020602121,1.8267896946876,0.23467170806371,0.847328283455281,0,0.32977250588296,0.484393280087717,0.603129249281559,0.596861720015682,0.656563598980245,1.1659233465194,1.11255181206306,0.341741761595705,0.82554747185289,0.370389054739423,0.188368457004691,0.820165366326151,0.457556346413045,0.339956859987711,0.139951452323658,0.414599921413271,0,0.632671987162271,0.813277868507395,0.108005340821801,0,0,0,0.41326727862668,0,0.129614973291793,0.621339313086926,7.89170114157866,1.04661582230785,0.992750942742586,0.583353565032143,1.03327858782185,0.168956125490778,0.234714477291508,0.651021924219751,1.25831213310853,5.31485065817213,10.3690802252832,1.26404448251271,0.202725215290164,1.02710957164827,0.25984164595559,0.716106782669926,0.596044064343795,1.08175904567972,0.443068581523732,0.302899349844443,0.457240839929999,0.806609481094724,0.194915761479505,0.481059208201647,0.233753804363138,1.13365191807606,0.665957860122194,1.25599399253266,0.503653849092235,0.386379188064381,0.750729901804728,0.36630324853453,0.643105137237198,0,2.25900737046827,0.920650473014354,3.43737308063638,1.54667864109319,1.37016503954128,2.2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|short_description=p3@Gsk3a
|short_description=p3@Gsk3a
}}
}}

Latest revision as of 10:25, 26 September 2015

Short description:p3@Gsk3a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Gsk3a_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: -15bp_to_ENSMUST00000071739, ENSMUST00000108411, NM_001031667, uc009frx.1_5end
EntrezGene:Gsk3a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Gsk3a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G57.89
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H35.31
testis, neonate N30.CNhs11130.1391-42E210.37
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
oligodendrocyte precursor cell7.77e-078

Uber anatomy
Ontology termp-valuen
central nervous system2.05e-1373
nervous system8.14e-1375
neural tube2.08e-1252
neural rod2.08e-1252
future spinal cord2.08e-1252
neural keel2.08e-1252
regional part of nervous system9.34e-1254
gray matter5.81e-1134
occipital lobe7.89e-1010
visual cortex7.89e-1010
neocortex7.89e-1010
ectoderm-derived structure8.61e-1095
ectoderm8.61e-1095
presumptive ectoderm8.61e-1095
regional part of cerebral cortex8.87e-1017
neurectoderm1.08e-0964
neural plate1.08e-0964
presumptive neural plate1.08e-0964
regional part of brain9.60e-0946
brain1.92e-0847
future brain1.92e-0847
brain grey matter8.65e-0829
regional part of telencephalon8.65e-0829
telencephalon8.65e-0829
ecto-epithelium1.21e-0773
cerebral cortex2.28e-0721
cerebral hemisphere2.28e-0721
pallium2.28e-0721
anterior neural tube2.59e-0740
posterior neural tube7.09e-0712
chordal neural plate7.09e-0712
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