FFCP PHASE1:Mm9::chr9:14304807..14304821,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=244694 | |EntrezGene=244694 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=29 | |||
|TSSclassifier=NA | |||
|UniProt=Q3U2K5 | |UniProt=Q3U2K5 | ||
|association_with_transcript=22bp_to_ENSMUST00000115647_5end | |||
|cluster_id=chr9:14304807..14304821,- | |||
|description=CAGE_peak_3_at_Kdm4d_5end | |||
|id=chr9:14304807..14304821,- | |||
|ontology_enrichment_celltype=CL:0000838!2.75e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.15e-14,32;CL:0002032,2.15e-14,32;CL:0000037,2.15e-14,32;CL:0000837,2.15e-14,32;CL:0000838,1.32e-12,12;CL:0000791,3.29e-12,9;CL:0000789,3.29e-12,9;CL:0002420,3.29e-12,9;CL:0002419,3.29e-12,9;CL:0000790,3.29e-12,9;CL:0000542,1.34e-11,13;CL:0000051,1.34e-11,13;CL:0000084,5.96e-10,11;CL:0000827,5.96e-10,11;CL:0002320,1.80e-09,46;CL:0000134,1.80e-09,46;CL:0000624,5.73e-09,8;CL:0000738,9.48e-09,17;CL:0002087,9.48e-09,17;CL:0000034,1.60e-08,97;CL:0000219,8.40e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.80e-09,46 | |||
|phase1_expression=0,0,0,0,0,0,0,12.9123323441576,1.40788722151667,0.70219357896598,0,0.0797721589953364,0.856003649656029,1.83582845079895,0,0.202475267389826,0,0.946386496074713,0.274228867211478,0,0.595303031057488,0.397163804803541,0.261199789138935,0,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35292595212406,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0.139986421625363,0,1.17447824240415,3.62681071005672,4.7053131879945,0,0,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0.210324961351382,0,0.662605622854841,0.122490799214954,0,0,0,0.383062014255563,0.307213066512487,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0.151452386666368,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.68510327831436,1.8125651855302,0.148442139064825,0,0,0.461230994512117,0,0.23517741427141,0,0,0.144599356919912,0.884610551949874,0,0,0,0,0.585561594023094,0.209446706813455,0,2.27648736561249,1.79970819298022,1.52484272487678,0.149790639404823,0,0.125654352112864,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,0.203678727700633,0.248813941220186,0,0.210441855886474,0,0,0,0.30140963567143,0.0680364991513279,0,0,0,0,0,0,0,0,0.348252166522167,0,0.59710280045548,0,1.80143534980301,1.98914449576915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.420579897128254,0.205809224758569,0,0,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0.387904974335251,0.140271639780637,0.126473074248515,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0,0,0.664394068946325,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,0.481651769963376,0.117211686592203,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.668396022247182,1.13230612315533,0.809621403349789,0,1.18586333383957,0.321321316421807,0.141940085208269,0.35613120733451,0.325773918707152,0,0,0,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0,0.540183282093931,0.129358683782755,0.214337035031592,0.177340233642274,0.356737635204141,0.329098041204242,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0,0,0.370850604021019,0.170870880797853,0.206386867963223,0,0.188368457004691,0.27338845544205,0.686334519619568,3.73952545986482,2.93898049879682,1.38199973804424,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,3.38215763210514,0.299033092087958,0.330916980914195,0.194451188344048,0.516639293910924,0.168956125490778,0,0.13020438484395,0.104859344425711,3.14059357073808,3.16833006883652,0,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0.240390899039938,0,0,0.15241361331,0.504130925684203,0.0974578807397524,0.288635524920988,0.233753804363138,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0,0,0.900642406448441,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0.169229215783353,0,0,0.271608227691724,0,0,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,12.9123323441576,1.40788722151667,0.70219357896598,0,0.0797721589953364,0.856003649656029,1.83582845079895,0,0.202475267389826,0,0.946386496074713,0.274228867211478,0,0.595303031057488,0.397163804803541,0.261199789138935,0,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35292595212406,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0.139986421625363,0,1.17447824240415,3.62681071005672,4.7053131879945,0,0,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0.210324961351382,0,0.662605622854841,0.122490799214954,0,0,0,0.383062014255563,0.307213066512487,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0.151452386666368,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.68510327831436,1.8125651855302,0.148442139064825,0,0,0.461230994512117,0,0.23517741427141,0,0,0.144599356919912,0.884610551949874,0,0,0,0,0.585561594023094,0.209446706813455,0,2.27648736561249,1.79970819298022,1.52484272487678,0.149790639404823,0,0.125654352112864,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,0.203678727700633,0.248813941220186,0,0.210441855886474,0,0,0,0.30140963567143,0.0680364991513279,0,0,0,0,0,0,0,0,0.348252166522167,0,0.59710280045548,0,1.80143534980301,1.98914449576915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.420579897128254,0.205809224758569,0,0,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0.387904974335251,0.140271639780637,0.126473074248515,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0,0,0.664394068946325,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,0.481651769963376,0.117211686592203,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.668396022247182,1.13230612315533,0.809621403349789,0,1.18586333383957,0.321321316421807,0.141940085208269,0.35613120733451,0.325773918707152,0,0,0,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0,0.540183282093931,0.129358683782755,0.214337035031592,0.177340233642274,0.356737635204141,0.329098041204242,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0,0,0.370850604021019,0.170870880797853,0.206386867963223,0,0.188368457004691,0.27338845544205,0.686334519619568,3.73952545986482,2.93898049879682,1.38199973804424,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,3.38215763210514,0.299033092087958,0.330916980914195,0.194451188344048,0.516639293910924,0.168956125490778,0,0.13020438484395,0.104859344425711,3.14059357073808,3.16833006883652,0,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0.240390899039938,0,0,0.15241361331,0.504130925684203,0.0974578807397524,0.288635524920988,0.233753804363138,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0,0,0.900642406448441,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0.169229215783353,0,0,0.271608227691724,0,0,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | ||
|short_description=p3@Kdm4d | |||
}} | }} |
Latest revision as of 09:53, 26 September 2015
Short description: | p3@Kdm4d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kdm4d_5end |
Coexpression cluster: | MCL_coexpression_mm9:29 |
Association with transcript: | 22bp_to_ENSMUST00000115647_5end |
EntrezGene: | Kdm4d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.15e-14 | 32 |
hematopoietic oligopotent progenitor cell | 2.15e-14 | 32 |
hematopoietic stem cell | 2.15e-14 | 32 |
hematopoietic multipotent progenitor cell | 2.15e-14 | 32 |
lymphoid lineage restricted progenitor cell | 1.32e-12 | 12 |
mature alpha-beta T cell | 3.29e-12 | 9 |
alpha-beta T cell | 3.29e-12 | 9 |
immature T cell | 3.29e-12 | 9 |
mature T cell | 3.29e-12 | 9 |
immature alpha-beta T cell | 3.29e-12 | 9 |
lymphocyte | 1.34e-11 | 13 |
common lymphoid progenitor | 1.34e-11 | 13 |
T cell | 5.96e-10 | 11 |
pro-T cell | 5.96e-10 | 11 |
connective tissue cell | 1.80e-09 | 46 |
mesenchymal cell | 1.80e-09 | 46 |
CD4-positive, alpha-beta T cell | 5.73e-09 | 8 |
leukocyte | 9.48e-09 | 17 |
nongranular leukocyte | 9.48e-09 | 17 |
stem cell | 1.60e-08 | 97 |
motile cell | 8.40e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.80e-09 | 46 |