FFCP PHASE1:Mm9::chr7:25230713..25230722,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=210145 | |EntrezGene=210145 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=142 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z720 | |UniProt=D3Z720 | ||
|association_with_transcript=-12bp_to_NM_199013,uc009fpp.1_5end | |association_with_transcript=-12bp_to_NM_199013,uc009fpp.1_5end | ||
|cluster_id=chr7:25230713..25230722,- | |||
|description=CAGE_peak_7_at_Irgc1_5end | |description=CAGE_peak_7_at_Irgc1_5end | ||
|id=chr7:25230713..25230722,- | |id=chr7:25230713..25230722,- | ||
|ontology_enrichment_celltype=CL:0000988!6.28e-16!32;CL:0002032!6.28e-16!32;CL:0000037!6.28e-16!32;CL:0000566!6.28e-16!32;CL:0000837!6.28e-16!32;CL:0002320!4.46e-10!46;CL:0000134!4.46e-10!46;CL:0000049!5.72e-10!19;CL:0000624!1.15e-08!8;CL:0000219!4.15e-08!54;CL:0000838!9.47e-08!12;CL:0000791!1.16e-07!9;CL:0000789!1.16e-07!9;CL:0002420!1.16e-07!9;CL:0002419!1.16e-07!9;CL:0000790!1.16e-07!9;CL:0002031!2.38e-07!25;CL:0000542!4.23e-07!13;CL:0000051!4.23e-07!13 | |ontology_enrichment_celltype=CL:0000988!6.28e-16!32;CL:0002032!6.28e-16!32;CL:0000037!6.28e-16!32;CL:0000566!6.28e-16!32;CL:0000837!6.28e-16!32;CL:0002320!4.46e-10!46;CL:0000134!4.46e-10!46;CL:0000049!5.72e-10!19;CL:0000624!1.15e-08!8;CL:0000219!4.15e-08!54;CL:0000838!9.47e-08!12;CL:0000791!1.16e-07!9;CL:0000789!1.16e-07!9;CL:0002420!1.16e-07!9;CL:0002419!1.16e-07!9;CL:0000790!1.16e-07!9;CL:0002031!2.38e-07!25;CL:0000542!4.23e-07!13;CL:0000051!4.23e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000355,9.19e-09,9 | |||
|ontology_enrichment_disease=DOID:0060100!1.17e-09!3;DOID:4045!1.17e-09!3 | |ontology_enrichment_disease=DOID:0060100!1.17e-09!3;DOID:4045!1.17e-09!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.91e-24,3;DOID:4045,3.91e-24,3;DOID:0050686,1.24e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!4.46e-10!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,9.19e-09,9;UBERON:0002036,9.19e-09,9;UBERON:0002385,9.19e-09,9;UBERON:0000486,9.19e-09,9;UBERON:0007503,9.19e-09,9;UBERON:0001015,9.19e-09,9;UBERON:0002329,9.19e-09,9;UBERON:0003082,9.19e-09,9;UBERON:0003059,9.19e-09,9;UBERON:0007282,9.19e-09,9;UBERON:0004290,9.19e-09,9;UBERON:0009618,9.19e-09,9;UBERON:0000383,5.53e-08,10;UBERON:0007524,2.41e-07,11;UBERON:0003077,2.41e-07,11;UBERON:0007285,2.41e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0.234064526321993,0,0,0.856003649656029,0.611942816932982,0,0.202475267389826,0,0.315462165358238,0.411343300817216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53356935326434,5.4693474116666,0.523523743973798,6.47054636834116,14.3439551841274,2.42755176515577,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0.234064526321993,0,0,0.856003649656029,0.611942816932982,0,0.202475267389826,0,0.315462165358238,0.411343300817216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53356935326434,5.4693474116666,0.523523743973798,6.47054636834116,14.3439551841274,2.42755176515577,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p7@Irgc1 | |short_description=p7@Irgc1 | ||
}} | }} |
Latest revision as of 09:29, 26 September 2015
Short description: | p7@Irgc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Irgc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:142 |
Association with transcript: | -12bp_to_NM_199013, uc009fpp.1_5end |
EntrezGene: | Irgc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 9.19e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 9.19e-09 | 9 |
striated muscle tissue | 9.19e-09 | 9 |
muscle tissue | 9.19e-09 | 9 |
multilaminar epithelium | 9.19e-09 | 9 |
epithelial vesicle | 9.19e-09 | 9 |
musculature | 9.19e-09 | 9 |
somite | 9.19e-09 | 9 |
myotome | 9.19e-09 | 9 |
presomitic mesoderm | 9.19e-09 | 9 |
presumptive segmental plate | 9.19e-09 | 9 |
dermomyotome | 9.19e-09 | 9 |
trunk paraxial mesoderm | 9.19e-09 | 9 |
musculature of body | 5.53e-08 | 10 |
dense mesenchyme tissue | 2.41e-07 | 11 |
paraxial mesoderm | 2.41e-07 | 11 |
presumptive paraxial mesoderm | 2.41e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.91e-24 | 3 |
muscle cancer | 3.91e-24 | 3 |
organ system cancer | 1.24e-12 | 6 |