FFCP PHASE1:Mm9::chr17:35252416..35252465,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=266614 | |EntrezGene=266614 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=9 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K1T4 | |UniProt=Q8K1T4 | ||
|association_with_transcript=-43bp_to_ENSMUST00000062657,ENSMUST00000172854,uc008cft.2_5end | |association_with_transcript=-43bp_to_ENSMUST00000062657,ENSMUST00000172854,uc008cft.2_5end | ||
|cluster_id=chr17:35252416..35252465,- | |||
|description=CAGE_peak_1_at_Ly6g5b_5end | |description=CAGE_peak_1_at_Ly6g5b_5end | ||
|id=chr17:35252416..35252465,- | |id=chr17:35252416..35252465,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.56e-17,3;DOID:4045,1.56e-17,3;DOID:0050686,4.80e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.73e-08!29;UBERON:0002193!2.99e-07!48;UBERON:0002390!3.47e-07!45;UBERON:0003061!3.47e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000080,2.20e-13,4;UBERON:0005904,2.20e-13,4;UBERON:0006947,2.20e-13,4;UBERON:0002120,2.20e-13,4;UBERON:0004054,2.20e-13,4;UBERON:0004875,2.20e-13,4;UBERON:0004876,2.20e-13,4;UBERON:0005721,2.20e-13,4;UBERON:0005754,2.20e-13,4;UBERON:0007297,2.20e-13,4;UBERON:0001301,7.12e-09,3;UBERON:0006555,7.12e-09,3;UBERON:0005103,7.12e-09,3;UBERON:0000083,7.12e-09,3;UBERON:0009201,7.12e-09,3;UBERON:0004819,7.12e-09,3;UBERON:0006553,7.12e-09,3;UBERON:0003074,7.12e-09,3;UBERON:0003060,7.12e-09,3;UBERON:0000058,7.22e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0,0,0.607425802169478,0,0.473193248037357,0.137114433605739,0,7.56885282344521,0.992909512008853,0.783599367416806,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,56.5017701494825,43.7547792933328,53.9229456293012,72.9407045158458,61.4740936462601,84.4788014274207,0,0,0,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,6.74133216632409,0,0,0,0,0,0,0,0,0,0,23.9786147410026,4.40194402200192,0.445326417194474,0.173485326766136,0,0,0,0,0,0,0.144599356919912,3.5384422077995,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,268.09702166475,2258.33056936332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0,0,0,0,0,0,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.246794327843601,0.296452627087149,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0.172684981865896,0.723245292907558,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.8244312647074,0,0.241251699712623,0.358117032009409,0.984845398470368,0,0,0.512612642393558,0.206386867963223,0.370389054739423,0.565105371014073,0.27338845544205,0,0.339956859987711,0.139951452323658,0.138199973804424,0.954670618015114,0,0,0,0,0,0,0.165306911450672,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,1.58005560314089,0,0.616265742988964,1.03936658382236,0.716106782669926,0.39736270956253,0.721172697119813,0.886137163047463,0.302899349844443,0.228620419965,0.302478555410522,0.38983152295901,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0,0,0.607425802169478,0,0.473193248037357,0.137114433605739,0,7.56885282344521,0.992909512008853,0.783599367416806,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,56.5017701494825,43.7547792933328,53.9229456293012,72.9407045158458,61.4740936462601,84.4788014274207,0,0,0,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,6.74133216632409,0,0,0,0,0,0,0,0,0,0,23.9786147410026,4.40194402200192,0.445326417194474,0.173485326766136,0,0,0,0,0,0,0.144599356919912,3.5384422077995,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,268.09702166475,2258.33056936332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0,0,0,0,0,0,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.246794327843601,0.296452627087149,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0.172684981865896,0.723245292907558,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.8244312647074,0,0.241251699712623,0.358117032009409,0.984845398470368,0,0,0.512612642393558,0.206386867963223,0.370389054739423,0.565105371014073,0.27338845544205,0,0.339956859987711,0.139951452323658,0.138199973804424,0.954670618015114,0,0,0,0,0,0,0.165306911450672,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,1.58005560314089,0,0.616265742988964,1.03936658382236,0.716106782669926,0.39736270956253,0.721172697119813,0.886137163047463,0.302899349844443,0.228620419965,0.302478555410522,0.38983152295901,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | ||
|short_description=p1@Ly6g5b | |short_description=p1@Ly6g5b | ||
}} | }} |
Latest revision as of 09:27, 26 September 2015
Short description: | p1@Ly6g5b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ly6g5b_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | -43bp_to_ENSMUST00000062657, ENSMUST00000172854, uc008cft.2_5end |
EntrezGene: | Ly6g5b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesonephros | 2.20e-13 | 4 |
duct of male reproductive system | 2.20e-13 | 4 |
male genital duct | 2.20e-13 | 4 |
pronephros | 2.20e-13 | 4 |
internal male genitalia | 2.20e-13 | 4 |
nephrogenic cord | 2.20e-13 | 4 |
urogenital ridge | 2.20e-13 | 4 |
pronephric mesoderm | 2.20e-13 | 4 |
rostral part of nephrogenic cord | 2.20e-13 | 4 |
presumptive pronephric mesoderm | 2.20e-13 | 4 |
epididymis | 7.12e-09 | 3 |
excretory tube | 7.12e-09 | 3 |
mesonephric epithelium | 7.12e-09 | 3 |
mesonephric tubule | 7.12e-09 | 3 |
nephric duct | 7.12e-09 | 3 |
kidney epithelium | 7.12e-09 | 3 |
renal duct | 7.12e-09 | 3 |
mesonephric duct | 7.12e-09 | 3 |
pronephric duct | 7.12e-09 | 3 |
duct | 7.22e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.56e-17 | 3 |
muscle cancer | 1.56e-17 | 3 |
organ system cancer | 4.80e-09 | 6 |