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FFCP PHASE1:Mm9::chr2:22478051..22478112,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14417
|EntrezGene=14417
|HGNC=
|HGNC=
|MCL_coexpression_id=251
|MCL_coexpression_id=251
|TSSclassifier=NA
|UniProt=P48320,Q548L4,Q3URJ3
|UniProt=P48320,Q548L4,Q3URJ3
|association_with_transcript=204bp_to_NM_008078,uc008ini.1,uc008inj.1,uc008ink.1_5end
|association_with_transcript=204bp_to_NM_008078,uc008ini.1,uc008inj.1,uc008ink.1_5end
|cluster_id=chr2:22478051..22478112,+
|description=CAGE_peak_1_at_Gad2_5end
|description=CAGE_peak_1_at_Gad2_5end
|id=chr2:22478051..22478112,+
|id=chr2:22478051..22478112,+
|ontology_enrichment_celltype=CL:0000117!1.81e-16!23;CL:0000337!1.81e-16!23;CL:0000540!3.37e-09!33;CL:0000047!3.37e-09!33;CL:0000031!3.37e-09!33;CL:0000404!3.37e-09!33;CL:0002319!9.82e-08!43;CL:0000221!2.42e-07!44;CL:0000133!2.42e-07!44
|ontology_enrichment_celltype=CL:0000117!1.81e-16!23;CL:0000337!1.81e-16!23;CL:0000540!3.37e-09!33;CL:0000047!3.37e-09!33;CL:0000031!3.37e-09!33;CL:0000404!3.37e-09!33;CL:0002319!9.82e-08!43;CL:0000221!2.42e-07!44;CL:0000133!2.42e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,1.45e-19,23;CL:0000337,1.45e-19,23;CL:0000540,4.16e-11,33;CL:0000047,4.16e-11,33;CL:0000031,4.16e-11,33;CL:0000404,4.16e-11,33;CL:0000393,3.10e-08,39;CL:0000211,3.10e-08,39;CL:0002319,2.00e-07,43;CL:0000221,4.30e-07,44;CL:0000133,4.30e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!7.06e-31!63;UBERON:0001049!5.59e-28!52;UBERON:0005068!5.59e-28!52;UBERON:0006241!5.59e-28!52;UBERON:0007135!5.59e-28!52;UBERON:0000955!1.98e-27!50;UBERON:0006238!1.98e-27!50;UBERON:0002346!7.89e-27!71;UBERON:0003075!7.89e-27!71;UBERON:0007284!7.89e-27!71;UBERON:0002616!1.89e-26!49;UBERON:0003056!3.22e-26!49;UBERON:0000073!9.39e-26!75;UBERON:0001016!9.39e-26!75;UBERON:0001017!1.96e-25!73;UBERON:0005743!1.96e-25!73;UBERON:0004121!7.88e-23!102;UBERON:0000924!7.88e-23!102;UBERON:0006601!7.88e-23!102;UBERON:0002020!1.13e-21!34;UBERON:0003080!2.22e-21!40;UBERON:0002780!1.81e-20!39;UBERON:0001890!1.81e-20!39;UBERON:0006240!1.81e-20!39;UBERON:0007811!8.06e-19!86;UBERON:0002791!2.22e-18!29;UBERON:0003528!2.22e-18!29;UBERON:0001893!2.22e-18!29;UBERON:0000153!7.03e-16!94;UBERON:0000956!2.09e-12!21;UBERON:0001869!2.09e-12!21;UBERON:0000203!2.09e-12!21;UBERON:0002619!2.14e-10!17;UBERON:0002021!5.25e-09!10;UBERON:0000411!5.25e-09!10;UBERON:0001950!5.25e-09!10;UBERON:0002420!2.84e-07!8;UBERON:0007245!2.84e-07!8;UBERON:0010009!2.84e-07!8;UBERON:0010011!2.84e-07!8;UBERON:0000454!2.84e-07!8;UBERON:0003076!4.64e-07!12;UBERON:0003057!4.64e-07!12
|ontology_enrichment_uberon=UBERON:0000033!7.06e-31!63;UBERON:0001049!5.59e-28!52;UBERON:0005068!5.59e-28!52;UBERON:0006241!5.59e-28!52;UBERON:0007135!5.59e-28!52;UBERON:0000955!1.98e-27!50;UBERON:0006238!1.98e-27!50;UBERON:0002346!7.89e-27!71;UBERON:0003075!7.89e-27!71;UBERON:0007284!7.89e-27!71;UBERON:0002616!1.89e-26!49;UBERON:0003056!3.22e-26!49;UBERON:0000073!9.39e-26!75;UBERON:0001016!9.39e-26!75;UBERON:0001017!1.96e-25!73;UBERON:0005743!1.96e-25!73;UBERON:0004121!7.88e-23!102;UBERON:0000924!7.88e-23!102;UBERON:0006601!7.88e-23!102;UBERON:0002020!1.13e-21!34;UBERON:0003080!2.22e-21!40;UBERON:0002780!1.81e-20!39;UBERON:0001890!1.81e-20!39;UBERON:0006240!1.81e-20!39;UBERON:0007811!8.06e-19!86;UBERON:0002791!2.22e-18!29;UBERON:0003528!2.22e-18!29;UBERON:0001893!2.22e-18!29;UBERON:0000153!7.03e-16!94;UBERON:0000956!2.09e-12!21;UBERON:0001869!2.09e-12!21;UBERON:0000203!2.09e-12!21;UBERON:0002619!2.14e-10!17;UBERON:0002021!5.25e-09!10;UBERON:0000411!5.25e-09!10;UBERON:0001950!5.25e-09!10;UBERON:0002420!2.84e-07!8;UBERON:0007245!2.84e-07!8;UBERON:0010009!2.84e-07!8;UBERON:0010011!2.84e-07!8;UBERON:0000454!2.84e-07!8;UBERON:0003076!4.64e-07!12;UBERON:0003057!4.64e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.51e-32,64;UBERON:0003075,2.51e-32,64;UBERON:0007284,2.51e-32,64;UBERON:0000073,3.08e-32,54;UBERON:0001049,7.36e-30,52;UBERON:0005068,7.36e-30,52;UBERON:0006241,7.36e-30,52;UBERON:0007135,7.36e-30,52;UBERON:0003056,1.64e-26,49;UBERON:0002020,3.31e-26,34;UBERON:0001017,3.39e-26,73;UBERON:0010371,5.46e-26,73;UBERON:0000955,5.66e-26,47;UBERON:0006238,5.66e-26,47;UBERON:0001016,5.39e-25,75;UBERON:0002616,7.30e-25,46;UBERON:0004121,3.70e-24,95;UBERON:0000924,3.70e-24,95;UBERON:0006601,3.70e-24,95;UBERON:0003528,3.24e-22,29;UBERON:0002791,3.24e-22,29;UBERON:0001893,3.24e-22,29;UBERON:0003080,7.24e-22,40;UBERON:0002780,8.19e-21,39;UBERON:0001890,8.19e-21,39;UBERON:0006240,8.19e-21,39;UBERON:0010314,7.51e-17,92;UBERON:0000956,5.65e-15,21;UBERON:0001869,5.65e-15,21;UBERON:0000203,5.65e-15,21;UBERON:0002619,1.51e-12,17;UBERON:0002021,1.49e-10,10;UBERON:0000411,1.49e-10,10;UBERON:0001950,1.49e-10,10;UBERON:0002420,1.83e-08,8;UBERON:0007245,1.83e-08,8;UBERON:0010009,1.83e-08,8;UBERON:0010011,1.83e-08,8;UBERON:0000454,1.83e-08,8;UBERON:0003076,2.35e-08,12;UBERON:0003057,2.35e-08,12
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.467225281191051,0.258246646883153,0.140788722151667,0,0,0.0797721589953364,0.171200729931206,0.174840804837995,0,0,0,0,0,0,9.69493507722195,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1554064790051,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0,0,0,0,0,0,0,0,0,0,12.5436205732951,15.869729378161,16.4796164911607,0,0,0,0,0,0.299600110518405,0.768436610643109,2.07379224616955,4.3201900266141,3.15487442027073,13.9968982357864,14.1355866209033,39.5645281464302,38.4340338783128,39.5264078242309,63.8672109796454,38.5615761017267,55.7591715720164,12.6610836220986,9.05727671663856,15.106487746146,41.3190838522044,35.4540444319958,34.8380004931127,23.8649154233671,19.9320353118744,10.4383689662168,0.151452386666368,0.529000920747499,0,0,0,0,0,0,2.52799956237153,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0.173485326766136,0.608930956624282,0,0,0,0,0,0,0,0,0,0,0,21.6657789788545,22.6202443358531,0,0,0,0,70.102019241457,134.047676625858,49.8847777888072,42.0654854865309,37.5901722275586,79.1672449771924,87.7725233196569,0,0,0,2.73574412652416,0.650602214813519,3.90833577536904,4.14142898552303,6.48030716693575,14.1515918234762,11.7864622662062,9.0890672822937,6.98499100995342,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0.116765342367169,0,0,0,0,0,0,34.697841513081,9.46722433889417,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,35.0000286173386,34.1086007983311,0,0,0,0,0,0,0,0,0,0,0,130.135133150832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12791290356818,2.16073312837572,0.129358683782755,0,0.532020700926821,0.356737635204141,0.329098041204242,1.2178597964584,0,0,0.220528398054962,0,0,0,0,0,0,25.0324157714188,0,0,0,0,0,0,0.849892149969277,2.6590775941495,1.93479963326193,0,0.158167996790568,0,0,0,0,0,0,0,0.129614973291793,0,3.94585057078933,0,0,0,0,0,0,0,0,0,4.03242008761012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,28.0880378259804,48.5686584650677,47.4134993602392,43.5400590213941,29.5587473631143,32.8839609489908,34.7481192799262,29.7009900101995,29.2708782095743,27.1885445390523,39.3497836931383,0.62272408550506,3.59122386060928,2.73173769206615,0.729320151204882,2.93458427679175,2.5738091183002,2.889207461421,3.29656091582231,4.1719497246936,1.26348605881899,2.5347929989024,3.2066478035633,1.03005658216871,2.36893063898016,2.23998328926892,3.33405583898152,2.43357084484197,2.31491064556446,1.64834360321323,3.09117732282234,2.40008476669791,1.77475806159337,2.62279808942053,2.0348498328526,3.10560955370591,2.70766745253365,2.92684756596436,2.10455769150274,2.8518863907631,5.61142271657738,1.89816028998679,1.97008964751127,1.22769312950907,2.94379998253335,1.35034627686799,4.24677982494508,1.40358965067245,2.14871054048298,1.53030665655075,1.32354851471709,0.695603506861264
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.467225281191051,0.258246646883153,0.140788722151667,0,0,0.0797721589953364,0.171200729931206,0.174840804837995,0,0,0,0,0,0,9.69493507722195,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1554064790051,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0,0,0,0,0,0,0,0,0,0,12.5436205732951,15.869729378161,16.4796164911607,0,0,0,0,0,0.299600110518405,0.768436610643109,2.07379224616955,4.3201900266141,3.15487442027073,13.9968982357864,14.1355866209033,39.5645281464302,38.4340338783128,39.5264078242309,63.8672109796454,38.5615761017267,55.7591715720164,12.6610836220986,9.05727671663856,15.106487746146,41.3190838522044,35.4540444319958,34.8380004931127,23.8649154233671,19.9320353118744,10.4383689662168,0.151452386666368,0.529000920747499,0,0,0,0,0,0,2.52799956237153,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0.173485326766136,0.608930956624282,0,0,0,0,0,0,0,0,0,0,0,21.6657789788545,22.6202443358531,0,0,0,0,70.102019241457,134.047676625858,49.8847777888072,42.0654854865309,37.5901722275586,79.1672449771924,87.7725233196569,0,0,0,2.73574412652416,0.650602214813519,3.90833577536904,4.14142898552303,6.48030716693575,14.1515918234762,11.7864622662062,9.0890672822937,6.98499100995342,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0.116765342367169,0,0,0,0,0,0,34.697841513081,9.46722433889417,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,35.0000286173386,34.1086007983311,0,0,0,0,0,0,0,0,0,0,0,130.135133150832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12791290356818,2.16073312837572,0.129358683782755,0,0.532020700926821,0.356737635204141,0.329098041204242,1.2178597964584,0,0,0.220528398054962,0,0,0,0,0,0,25.0324157714188,0,0,0,0,0,0,0.849892149969277,2.6590775941495,1.93479963326193,0,0.158167996790568,0,0,0,0,0,0,0,0.129614973291793,0,3.94585057078933,0,0,0,0,0,0,0,0,0,4.03242008761012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,28.0880378259804,48.5686584650677,47.4134993602392,43.5400590213941,29.5587473631143,32.8839609489908,34.7481192799262,29.7009900101995,29.2708782095743,27.1885445390523,39.3497836931383,0.62272408550506,3.59122386060928,2.73173769206615,0.729320151204882,2.93458427679175,2.5738091183002,2.889207461421,3.29656091582231,4.1719497246936,1.26348605881899,2.5347929989024,3.2066478035633,1.03005658216871,2.36893063898016,2.23998328926892,3.33405583898152,2.43357084484197,2.31491064556446,1.64834360321323,3.09117732282234,2.40008476669791,1.77475806159337,2.62279808942053,2.0348498328526,3.10560955370591,2.70766745253365,2.92684756596436,2.10455769150274,2.8518863907631,5.61142271657738,1.89816028998679,1.97008964751127,1.22769312950907,2.94379998253335,1.35034627686799,4.24677982494508,1.40358965067245,2.14871054048298,1.53030665655075,1.32354851471709,0.695603506861264
|short_description=p1@Gad2
|short_description=p1@Gad2
}}
}}

Latest revision as of 09:06, 26 September 2015

Short description:p1@Gad2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gad2_5end
Coexpression cluster:MCL_coexpression_mm9:251
Association with transcript: 204bp_to_NM_008078, uc008ini.1, uc008inj.1, uc008ink.1_5end
EntrezGene:Gad2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gad2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C312.54
Mouse Granule cells, donor2.CNhs12357.11731-123E315.87
Mouse Granule cells, donor3.CNhs12108.11636-122C716.48
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.14
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D239.56
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F238.43
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D639.53
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D363.87
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F338.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D755.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.06
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E441.32
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E535.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I634.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D623.86
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.93
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.44
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B221.67
cerebellum, neonate N30.CNhs11135.1395-42I222.62
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A470.10
corpus striatum, adult.CNhs10487.19-21D8134.05
corpus striatum, neonate N00.CNhs11226.630-43F149.88
cortex, adult.CNhs10473.12-14D542.07
cortex, neonate N30.CNhs11107.1392-42F237.59
diencephalon, adult.CNhs10482.20-12F279.17
diencephalon, neonate N30.CNhs11201.1388-42B287.77
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C94.14
eyeball, embryo E17.CNhs11023.1261-18D46.48
eyeball, neonate N00.CNhs11207.633-15C614.15
eyeball, neonate N01.CNhs11140.1532-43E711.79
eyeball, neonate N02.CNhs11205.1551-44G89.09
eyeball, neonate N16.CNhs11188.777-19A26.98
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E834.70
hippocampus, neonate N00.CNhs11228.627-43G19.47
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C235.00
medulla oblongata, neonate N30.CNhs11200.1396-42A334.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I9130.14
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C925.03
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E24.03
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F828.09
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A148.57
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A247.41
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A343.54
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D729.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A432.88
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A534.75
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A729.27
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A827.19
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A939.35
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.45e-1923
neuroblast (sensu Vertebrata)1.45e-1923
neuron4.16e-1133
neuronal stem cell4.16e-1133
neuroblast4.16e-1133
electrically signaling cell4.16e-1133
electrically responsive cell3.10e-0839
electrically active cell3.10e-0839
neural cell2.00e-0743
ectodermal cell4.30e-0744
neurectodermal cell4.30e-0744

Uber anatomy
Ontology termp-valuen
neurectoderm2.51e-3264
neural plate2.51e-3264
presumptive neural plate2.51e-3264
regional part of nervous system3.08e-3254
neural tube7.36e-3052
neural rod7.36e-3052
future spinal cord7.36e-3052
neural keel7.36e-3052
pre-chordal neural plate1.64e-2649
gray matter3.31e-2634
central nervous system3.39e-2673
ecto-epithelium5.46e-2673
brain5.66e-2647
future brain5.66e-2647
nervous system5.39e-2575
regional part of brain7.30e-2546
ectoderm-derived structure3.70e-2495
ectoderm3.70e-2495
presumptive ectoderm3.70e-2495
brain grey matter3.24e-2229
regional part of telencephalon3.24e-2229
telencephalon3.24e-2229
anterior neural tube7.24e-2240
regional part of forebrain8.19e-2139
forebrain8.19e-2139
future forebrain8.19e-2139
structure with developmental contribution from neural crest7.51e-1792
cerebral cortex5.65e-1521
cerebral hemisphere5.65e-1521
pallium5.65e-1521
regional part of cerebral cortex1.51e-1217
occipital lobe1.49e-1010
visual cortex1.49e-1010
neocortex1.49e-1010
basal ganglion1.83e-088
nuclear complex of neuraxis1.83e-088
aggregate regional part of brain1.83e-088
collection of basal ganglia1.83e-088
cerebral subcortex1.83e-088
posterior neural tube2.35e-0812
chordal neural plate2.35e-0812
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