FFCP PHASE1:Mm9::chr2:20890177..20890240,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:20890177..20890240,- to FFCP PHASE1:Mm9::chr2:20890177..20890240,-: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71435 | |EntrezGene=71435 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=F6WQR2 | |UniProt=F6WQR2 | ||
|association_with_transcript=11bp_to_ENSMUST00000125783_5end | |||
|cluster_id=chr2:20890177..20890240,- | |||
|description=CAGE_peak_2_at_Arhgap21_5end | |||
|id=chr2:20890177..20890240,- | |||
|ontology_enrichment_celltype=CL:0000540!2.39e-11!33;CL:0000047!2.39e-11!33;CL:0000031!2.39e-11!33;CL:0000404!2.39e-11!33;CL:0000117!2.87e-10!23;CL:0000337!2.87e-10!23;CL:0000393!8.75e-08!39;CL:0000211!8.75e-08!39;CL:0002319!8.66e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.35e-11,33;CL:0000047,2.35e-11,33;CL:0000031,2.35e-11,33;CL:0000404,2.35e-11,33;CL:0000117,2.83e-10,23;CL:0000337,2.83e-10,23;CL:0000393,7.86e-08,39;CL:0000211,7.86e-08,39;CL:0002319,8.59e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.41e-11!63;UBERON:0000025!2.09e-11!114;UBERON:0002346!2.71e-11!71;UBERON:0003075!2.71e-11!71;UBERON:0007284!2.71e-11!71;UBERON:0004111!4.76e-11!122;UBERON:0001017!5.78e-11!73;UBERON:0005743!5.78e-11!73;UBERON:0004121!5.49e-10!102;UBERON:0000924!5.49e-10!102;UBERON:0006601!5.49e-10!102;UBERON:0000073!6.81e-10!75;UBERON:0001016!6.81e-10!75;UBERON:0003056!3.81e-09!49;UBERON:0002616!5.47e-09!49;UBERON:0000955!7.07e-09!50;UBERON:0006238!7.07e-09!50;UBERON:0001049!3.20e-08!52;UBERON:0005068!3.20e-08!52;UBERON:0006241!3.20e-08!52;UBERON:0007135!3.20e-08!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.52e-17,92;UBERON:0002346,7.60e-12,64;UBERON:0003075,7.60e-12,64;UBERON:0007284,7.60e-12,64;UBERON:0000025,2.13e-11,114;UBERON:0004111,4.84e-11,122;UBERON:0001017,5.69e-11,73;UBERON:0004121,3.55e-10,95;UBERON:0000924,3.55e-10,95;UBERON:0006601,3.55e-10,95;UBERON:0001016,6.72e-10,75;UBERON:0003056,3.77e-09,49;UBERON:0000073,4.96e-09,54;UBERON:0010371,8.51e-09,73;UBERON:0001049,3.17e-08,52;UBERON:0005068,3.17e-08,52;UBERON:0006241,3.17e-08,52;UBERON:0007135,3.17e-08,52;UBERON:0002616,8.30e-08,46;UBERON:0000955,1.05e-07,47;UBERON:0006238,1.05e-07,47 | |||
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| ||
|short_description=p2@Arhgap21 | |||
}} | }} |
Latest revision as of 08:56, 26 September 2015
Short description: | p2@Arhgap21 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Arhgap21_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENSMUST00000125783_5end |
EntrezGene: | Arhgap21 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.35e-11 | 33 |
neuronal stem cell | 2.35e-11 | 33 |
neuroblast | 2.35e-11 | 33 |
electrically signaling cell | 2.35e-11 | 33 |
CNS neuron (sensu Vertebrata) | 2.83e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.83e-10 | 23 |
electrically responsive cell | 7.86e-08 | 39 |
electrically active cell | 7.86e-08 | 39 |
neural cell | 8.59e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 6.52e-17 | 92 |
neurectoderm | 7.60e-12 | 64 |
neural plate | 7.60e-12 | 64 |
presumptive neural plate | 7.60e-12 | 64 |
tube | 2.13e-11 | 114 |
anatomical conduit | 4.84e-11 | 122 |
central nervous system | 5.69e-11 | 73 |
ectoderm-derived structure | 3.55e-10 | 95 |
ectoderm | 3.55e-10 | 95 |
presumptive ectoderm | 3.55e-10 | 95 |
nervous system | 6.72e-10 | 75 |
pre-chordal neural plate | 3.77e-09 | 49 |
regional part of nervous system | 4.96e-09 | 54 |
ecto-epithelium | 8.51e-09 | 73 |
neural tube | 3.17e-08 | 52 |
neural rod | 3.17e-08 | 52 |
future spinal cord | 3.17e-08 | 52 |
neural keel | 3.17e-08 | 52 |
regional part of brain | 8.30e-08 | 46 |
brain | 1.05e-07 | 47 |
future brain | 1.05e-07 | 47 |