FFCP PHASE1:Mm9::chr14:71026672..71026706,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13829 | |EntrezGene=13829 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=157bp_to_uc007uop.1_5end | |association_with_transcript=157bp_to_uc007uop.1_5end | ||
|cluster_id=chr14:71026672..71026706,- | |||
|description=CAGE_peak_4_at_Epb4.9_5end | |description=CAGE_peak_4_at_Epb4.9_5end | ||
|id=chr14:71026672..71026706,- | |id=chr14:71026672..71026706,- | ||
|ontology_enrichment_celltype=CL:0000117!9.54e-14!23;CL:0000337!9.54e-14!23;CL:0000540!6.82e-09!33;CL:0000047!6.82e-09!33;CL:0000031!6.82e-09!33;CL:0000404!6.82e-09!33 | |ontology_enrichment_celltype=CL:0000117!9.54e-14!23;CL:0000337!9.54e-14!23;CL:0000540!6.82e-09!33;CL:0000047!6.82e-09!33;CL:0000031!6.82e-09!33;CL:0000404!6.82e-09!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.97e-20,23;CL:0000337,1.97e-20,23;CL:0000540,6.94e-12,33;CL:0000047,6.94e-12,33;CL:0000031,6.94e-12,33;CL:0000404,6.94e-12,33;CL:0000393,5.89e-09,39;CL:0000211,5.89e-09,39;CL:0002319,1.70e-07,43;CL:0000221,3.54e-07,44;CL:0000133,3.54e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.35e-23!52;UBERON:0005068!1.35e-23!52;UBERON:0006241!1.35e-23!52;UBERON:0007135!1.35e-23!52;UBERON:0000955!3.50e-22!50;UBERON:0006238!3.50e-22!50;UBERON:0002346!8.55e-22!71;UBERON:0003075!8.55e-22!71;UBERON:0007284!8.55e-22!71;UBERON:0003056!8.96e-22!49;UBERON:0000033!1.04e-21!63;UBERON:0002616!1.94e-21!49;UBERON:0001017!5.28e-21!73;UBERON:0005743!5.28e-21!73;UBERON:0000073!1.17e-20!75;UBERON:0001016!1.17e-20!75;UBERON:0003080!7.36e-20!40;UBERON:0002780!3.71e-19!39;UBERON:0001890!3.71e-19!39;UBERON:0006240!3.71e-19!39;UBERON:0002020!4.19e-19!34;UBERON:0004121!3.22e-17!102;UBERON:0000924!3.22e-17!102;UBERON:0006601!3.22e-17!102;UBERON:0002791!9.48e-16!29;UBERON:0003528!9.48e-16!29;UBERON:0001893!9.48e-16!29;UBERON:0000956!6.53e-11!21;UBERON:0001869!6.53e-11!21;UBERON:0000203!6.53e-11!21;UBERON:0007811!4.12e-10!86;UBERON:0002021!6.07e-09!10;UBERON:0000411!6.07e-09!10;UBERON:0001950!6.07e-09!10;UBERON:0002619!6.11e-09!17;UBERON:0000153!1.39e-08!94;UBERON:0000025!8.30e-08!114 | |ontology_enrichment_uberon=UBERON:0001049!1.35e-23!52;UBERON:0005068!1.35e-23!52;UBERON:0006241!1.35e-23!52;UBERON:0007135!1.35e-23!52;UBERON:0000955!3.50e-22!50;UBERON:0006238!3.50e-22!50;UBERON:0002346!8.55e-22!71;UBERON:0003075!8.55e-22!71;UBERON:0007284!8.55e-22!71;UBERON:0003056!8.96e-22!49;UBERON:0000033!1.04e-21!63;UBERON:0002616!1.94e-21!49;UBERON:0001017!5.28e-21!73;UBERON:0005743!5.28e-21!73;UBERON:0000073!1.17e-20!75;UBERON:0001016!1.17e-20!75;UBERON:0003080!7.36e-20!40;UBERON:0002780!3.71e-19!39;UBERON:0001890!3.71e-19!39;UBERON:0006240!3.71e-19!39;UBERON:0002020!4.19e-19!34;UBERON:0004121!3.22e-17!102;UBERON:0000924!3.22e-17!102;UBERON:0006601!3.22e-17!102;UBERON:0002791!9.48e-16!29;UBERON:0003528!9.48e-16!29;UBERON:0001893!9.48e-16!29;UBERON:0000956!6.53e-11!21;UBERON:0001869!6.53e-11!21;UBERON:0000203!6.53e-11!21;UBERON:0007811!4.12e-10!86;UBERON:0002021!6.07e-09!10;UBERON:0000411!6.07e-09!10;UBERON:0001950!6.07e-09!10;UBERON:0002619!6.11e-09!17;UBERON:0000153!1.39e-08!94;UBERON:0000025!8.30e-08!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.64e-34,54;UBERON:0001049,6.41e-32,52;UBERON:0005068,6.41e-32,52;UBERON:0006241,6.41e-32,52;UBERON:0007135,6.41e-32,52;UBERON:0002020,7.55e-30,34;UBERON:0001017,3.12e-28,73;UBERON:0002346,7.25e-28,64;UBERON:0003075,7.25e-28,64;UBERON:0007284,7.25e-28,64;UBERON:0003080,1.17e-27,40;UBERON:0001016,5.15e-27,75;UBERON:0000955,6.85e-27,47;UBERON:0006238,6.85e-27,47;UBERON:0002780,1.38e-26,39;UBERON:0001890,1.38e-26,39;UBERON:0006240,1.38e-26,39;UBERON:0002616,8.43e-26,46;UBERON:0003056,2.51e-25,49;UBERON:0003528,1.33e-24,29;UBERON:0002791,1.33e-24,29;UBERON:0001893,1.33e-24,29;UBERON:0010371,1.92e-22,73;UBERON:0004121,2.34e-21,95;UBERON:0000924,2.34e-21,95;UBERON:0006601,2.34e-21,95;UBERON:0000956,4.79e-17,21;UBERON:0001869,4.79e-17,21;UBERON:0000203,4.79e-17,21;UBERON:0010314,1.27e-14,92;UBERON:0002619,5.53e-14,17;UBERON:0002021,5.44e-13,10;UBERON:0000411,5.44e-13,10;UBERON:0001950,5.44e-13,10;UBERON:0002420,1.13e-08,8;UBERON:0007245,1.13e-08,8;UBERON:0010009,1.13e-08,8;UBERON:0010011,1.13e-08,8;UBERON:0000454,1.13e-08,8;UBERON:0000025,1.98e-07,114;UBERON:0002240,3.55e-07,6;UBERON:0005174,3.55e-07,6;UBERON:0001137,3.55e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.82227740650843,1.39912375625629,0,0.137114433605739,0,7.22867966284093,0,0,0,0,0,0,0,0,0,0,1.90509202037889,3.07532393792285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,6.06949382578793,8.46385566835253,3.1691570175309,0,0,0,0,0,0,0,2.17748185847803,1.4850653216486,2.3135745748652,11.1403883917483,8.83474163806454,2.08234358665422,1.15014565221884,2.75765635983006,4.40463523997555,7.53355294702608,7.37311359629969,7.25374582516066,6.49562269577109,7.29278718779464,6.14202597803038,3.93933827022176,4.27835093775068,9.42811473515737,9.39653093274079,6.89677949553612,0.151452386666368,0.151143120213571,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0.60289056221049,0.23517741427141,0,0,0.578397427679647,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.878342391034642,0.83778682725382,0,0,0,0,9.43681028250383,58.5600771607842,8.16753288733619,55.1023095009516,51.1430914660661,10.1816141834184,22.8760180925538,0.101839363850316,0.248813941220186,0,0.420883711772948,0.390361328888111,0.689706313300419,1.0803727788321,0.90422890701429,1.2246569847239,0.512454881139399,1.87403449119458,1.29351685369508,0.215567992932842,0,0.351902248327898,0,0,0.348252166522167,0,0.59710280045548,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0,0.465067889500816,0,0.233530684734339,0.16455984991348,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0,22.5010244963616,7.61494131606705,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0.380451252225118,0,0,0,0,0,0.898819408654221,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0,0.126473074248515,0,0,0,0,0.500535317148282,0.196558995113203,0.674586337154561,1.01430060694251,0.72353147925725,0.50925170356284,0.287696137450811,0.162135226775035,0.549122826376163,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0.327726629431476,0,0,0,0,0,0,7.06422595946285,4.57125577709592,0,0,0,0,0,0.238968797952552,0.445597348164788,0,0,0.584511715822624,0.790575555893047,30.2042037436499,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0.340439605753788,1.62054984628179,2.8458910432206,1.07168517515796,0.354680467284547,1.42695054081656,1.97458824722545,0.608929898229199,0,0.42366414172764,0,0.16488625294148,0,0,0,0,0.291480836629851,4.82105785227325,0.512612642393558,0,0.370389054739423,0.188368457004691,1.91371918809435,1.14389086603261,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0.418176592028937,0.218362563746178,0.674321731924103,0.165306911450672,0,0,0,0,0.299033092087958,0,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,50.2629139929189,49.2548003062679,60.726924424576,53.6181928912305,76.7292422143119,68.7408446624627,58.0519350199353,63.0449684513909,52.5645194421677,70.4154023982475,0.207574695168353,1.59609949360412,1.02440163452481,0.486213434136588,1.67690530102386,1.47074806760011,0.888986911206461,1.03017528619447,1.60459604795908,1.51618327058278,1.77435509923168,2.64076877940507,1.68554713445788,1.40855335290712,1.43588672389033,0.952587382566147,1.15884325944855,1.73618298417335,1.64834360321323,1.76638704161277,1.37147700954166,0.887379030796687,1.66905332963125,2.32554266611726,1.31753132581463,1.4384483341585,1.64635175585495,1.8414879800649,1.22223702461276,3.36685362994643,0.949080144993393,1.57607171800902,1.22769312950907,1.23949472948773,1.35034627686799,2.49810577937946,0.701794825336225,1.50409737833809,1.14772999241306,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.82227740650843,1.39912375625629,0,0.137114433605739,0,7.22867966284093,0,0,0,0,0,0,0,0,0,0,1.90509202037889,3.07532393792285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,6.06949382578793,8.46385566835253,3.1691570175309,0,0,0,0,0,0,0,2.17748185847803,1.4850653216486,2.3135745748652,11.1403883917483,8.83474163806454,2.08234358665422,1.15014565221884,2.75765635983006,4.40463523997555,7.53355294702608,7.37311359629969,7.25374582516066,6.49562269577109,7.29278718779464,6.14202597803038,3.93933827022176,4.27835093775068,9.42811473515737,9.39653093274079,6.89677949553612,0.151452386666368,0.151143120213571,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0.60289056221049,0.23517741427141,0,0,0.578397427679647,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.878342391034642,0.83778682725382,0,0,0,0,9.43681028250383,58.5600771607842,8.16753288733619,55.1023095009516,51.1430914660661,10.1816141834184,22.8760180925538,0.101839363850316,0.248813941220186,0,0.420883711772948,0.390361328888111,0.689706313300419,1.0803727788321,0.90422890701429,1.2246569847239,0.512454881139399,1.87403449119458,1.29351685369508,0.215567992932842,0,0.351902248327898,0,0,0.348252166522167,0,0.59710280045548,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0,0.465067889500816,0,0.233530684734339,0.16455984991348,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0,22.5010244963616,7.61494131606705,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0.380451252225118,0,0,0,0,0,0.898819408654221,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0,0.126473074248515,0,0,0,0,0.500535317148282,0.196558995113203,0.674586337154561,1.01430060694251,0.72353147925725,0.50925170356284,0.287696137450811,0.162135226775035,0.549122826376163,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0.327726629431476,0,0,0,0,0,0,7.06422595946285,4.57125577709592,0,0,0,0,0,0.238968797952552,0.445597348164788,0,0,0.584511715822624,0.790575555893047,30.2042037436499,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0.340439605753788,1.62054984628179,2.8458910432206,1.07168517515796,0.354680467284547,1.42695054081656,1.97458824722545,0.608929898229199,0,0.42366414172764,0,0.16488625294148,0,0,0,0,0.291480836629851,4.82105785227325,0.512612642393558,0,0.370389054739423,0.188368457004691,1.91371918809435,1.14389086603261,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0.418176592028937,0.218362563746178,0.674321731924103,0.165306911450672,0,0,0,0,0.299033092087958,0,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,50.2629139929189,49.2548003062679,60.726924424576,53.6181928912305,76.7292422143119,68.7408446624627,58.0519350199353,63.0449684513909,52.5645194421677,70.4154023982475,0.207574695168353,1.59609949360412,1.02440163452481,0.486213434136588,1.67690530102386,1.47074806760011,0.888986911206461,1.03017528619447,1.60459604795908,1.51618327058278,1.77435509923168,2.64076877940507,1.68554713445788,1.40855335290712,1.43588672389033,0.952587382566147,1.15884325944855,1.73618298417335,1.64834360321323,1.76638704161277,1.37147700954166,0.887379030796687,1.66905332963125,2.32554266611726,1.31753132581463,1.4384483341585,1.64635175585495,1.8414879800649,1.22223702461276,3.36685362994643,0.949080144993393,1.57607171800902,1.22769312950907,1.23949472948773,1.35034627686799,2.49810577937946,0.701794825336225,1.50409737833809,1.14772999241306,0.441182838239031,0 | ||
|short_description=p4@Epb4.9 | |short_description=p4@Epb4.9 | ||
}} | }} |
Latest revision as of 08:47, 26 September 2015
Short description: | p4@Epb4.9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Epb4.9_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 157bp_to_uc007uop.1_5end |
EntrezGene: | Epb4.9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.97e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.97e-20 | 23 |
neuron | 6.94e-12 | 33 |
neuronal stem cell | 6.94e-12 | 33 |
neuroblast | 6.94e-12 | 33 |
electrically signaling cell | 6.94e-12 | 33 |
electrically responsive cell | 5.89e-09 | 39 |
electrically active cell | 5.89e-09 | 39 |
neural cell | 1.70e-07 | 43 |
ectodermal cell | 3.54e-07 | 44 |
neurectodermal cell | 3.54e-07 | 44 |