FFCP PHASE1:Mm9::chr5:91360235..91360337,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=665563 | |EntrezGene=665563 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=D3YZG8 | |UniProt=D3YZG8 | ||
|association_with_transcript=13bp_to_ENSMUST00000071652,NM_026788,uc008ybo.1,uc008ybp.1_5end | |association_with_transcript=13bp_to_ENSMUST00000071652,NM_026788,uc008ybo.1,uc008ybp.1_5end | ||
|cluster_id=chr5:91360235..91360337,+ | |||
|description=CAGE_peak_1_at_Mthfd2l_5end | |description=CAGE_peak_1_at_Mthfd2l_5end | ||
|id=chr5:91360235..91360337,+ | |id=chr5:91360235..91360337,+ | ||
|ontology_enrichment_celltype=CL:0000221!2.76e-17!44;CL:0000133!2.76e-17!44;CL:0002319!1.17e-16!43;CL:0000055!4.02e-16!50;CL:0002321!2.37e-15!70;CL:0000220!2.37e-15!70;CL:0000540!5.02e-14!33;CL:0000047!5.02e-14!33;CL:0000031!5.02e-14!33;CL:0000404!5.02e-14!33;CL:0000393!6.07e-13!39;CL:0000211!6.07e-13!39;CL:0000117!1.69e-09!23;CL:0000337!1.69e-09!23 | |ontology_enrichment_celltype=CL:0000221!2.76e-17!44;CL:0000133!2.76e-17!44;CL:0002319!1.17e-16!43;CL:0000055!4.02e-16!50;CL:0002321!2.37e-15!70;CL:0000220!2.37e-15!70;CL:0000540!5.02e-14!33;CL:0000047!5.02e-14!33;CL:0000031!5.02e-14!33;CL:0000404!5.02e-14!33;CL:0000393!6.07e-13!39;CL:0000211!6.07e-13!39;CL:0000117!1.69e-09!23;CL:0000337!1.69e-09!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.76e-17,44;CL:0000133,2.76e-17,44;CL:0002319,1.17e-16,43;CL:0002321,2.37e-15,70;CL:0000540,5.02e-14,33;CL:0000047,5.02e-14,33;CL:0000031,5.02e-14,33;CL:0000404,5.02e-14,33;CL:0000393,6.07e-13,39;CL:0000211,6.07e-13,39;CL:0000117,1.69e-09,23;CL:0000337,1.69e-09,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.06e-10!102;UBERON:0000924!1.06e-10!102;UBERON:0006601!1.06e-10!102;UBERON:0000073!3.87e-10!75;UBERON:0001016!3.87e-10!75;UBERON:0001017!1.92e-09!73;UBERON:0005743!1.92e-09!73 | |ontology_enrichment_uberon=UBERON:0004121!1.06e-10!102;UBERON:0000924!1.06e-10!102;UBERON:0006601!1.06e-10!102;UBERON:0000073!3.87e-10!75;UBERON:0001016!3.87e-10!75;UBERON:0001017!1.92e-09!73;UBERON:0005743!1.92e-09!73 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.91e-12,95;UBERON:0000924,1.91e-12,95;UBERON:0006601,1.91e-12,95;UBERON:0001016,3.87e-10,75;UBERON:0001017,1.92e-09,73;UBERON:0002346,3.90e-08,64;UBERON:0003075,3.90e-08,64;UBERON:0007284,3.90e-08,64;UBERON:0010371,5.35e-08,73 | |||
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| ||
|short_description=p1@Mthfd2l | |short_description=p1@Mthfd2l | ||
}} | }} |
Latest revision as of 08:46, 26 September 2015
Short description: | p1@Mthfd2l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mthfd2l_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENSMUST00000071652, NM_026788, uc008ybo.1, uc008ybp.1_5end |
EntrezGene: | Mthfd2l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.76e-17 | 44 |
neurectodermal cell | 2.76e-17 | 44 |
neural cell | 1.17e-16 | 43 |
embryonic cell | 2.37e-15 | 70 |
neuron | 5.02e-14 | 33 |
neuronal stem cell | 5.02e-14 | 33 |
neuroblast | 5.02e-14 | 33 |
electrically signaling cell | 5.02e-14 | 33 |
electrically responsive cell | 6.07e-13 | 39 |
electrically active cell | 6.07e-13 | 39 |
CNS neuron (sensu Vertebrata) | 1.69e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.69e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.91e-12 | 95 |
ectoderm | 1.91e-12 | 95 |
presumptive ectoderm | 1.91e-12 | 95 |
nervous system | 3.87e-10 | 75 |
central nervous system | 1.92e-09 | 73 |
neurectoderm | 3.90e-08 | 64 |
neural plate | 3.90e-08 | 64 |
presumptive neural plate | 3.90e-08 | 64 |
ecto-epithelium | 5.35e-08 | 73 |