FFCP PHASE1:Mm9::chr12:112680864..112680880,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:112680864..112680880,+
|short_description=p1@Tnfaip2
|description=CAGE_peak_1_at_Tnfaip2_5end
|association_with_transcript=0bp_to_ENSMUST00000021710,ENSMU...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=21928 | |EntrezGene=21928 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1074 | |||
|TSSclassifier=NA | |||
|UniProt=B2RQW1,D3Z4L9,G3UXC6,Q61333,Q3U4L9 | |UniProt=B2RQW1,D3Z4L9,G3UXC6,Q61333,Q3U4L9 | ||
|association_with_transcript=0bp_to_ENSMUST00000021710,ENSMUST00000109792,ENSMUST00000156003,ENSMUST00000172783,NM_009396,uc007pcy.2,uc007pcz.2_5end | |||
|cluster_id=chr12:112680864..112680880,+ | |||
|description=CAGE_peak_1_at_Tnfaip2_5end | |||
|id=chr12:112680864..112680880,+ | |||
|ontology_enrichment_celltype=CL:0000049!1.24e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.68e-08,19;CL:0000763,2.81e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!9.64e-11!32;UBERON:0002405!1.27e-09!70;UBERON:0002107!1.97e-08!22;UBERON:0007499!1.97e-08!22;UBERON:0006925!1.97e-08!22;UBERON:0009497!1.97e-08!22;UBERON:0000015!1.97e-08!22;UBERON:0002423!1.97e-08!22;UBERON:0006235!1.97e-08!22;UBERON:0008835!1.97e-08!22;UBERON:0003894!1.97e-08!22;UBERON:0004161!1.97e-08!22;UBERON:0008836!1.97e-08!22;UBERON:0005172!2.59e-08!49;UBERON:0005173!2.59e-08!49;UBERON:0002417!2.59e-08!49;UBERON:0000916!2.59e-08!49;UBERON:0002371!3.09e-08!16;UBERON:0005256!7.27e-08!47;UBERON:0001474!1.86e-07!22;UBERON:0004765!1.86e-07!22;UBERON:0001434!1.86e-07!22;UBERON:0009854!2.08e-07!23;UBERON:0009856!2.08e-07!23;UBERON:0009569!2.48e-07!66;UBERON:0002365!3.58e-07!25;UBERON:0002330!3.58e-07!25;UBERON:0003914!3.86e-07!47;UBERON:0000926!4.37e-07!193;UBERON:0004120!4.37e-07!193;UBERON:0006603!4.37e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.20e-12,32;UBERON:0003104,1.12e-09,61;UBERON:0009142,1.12e-09,61;UBERON:0005256,1.99e-09,45;UBERON:0002371,7.58e-09,16;UBERON:0002107,9.53e-09,22;UBERON:0007499,9.53e-09,22;UBERON:0006925,9.53e-09,22;UBERON:0009497,9.53e-09,22;UBERON:0000015,9.53e-09,22;UBERON:0002423,9.53e-09,22;UBERON:0006235,9.53e-09,22;UBERON:0008835,9.53e-09,22;UBERON:0003894,9.53e-09,22;UBERON:0004161,9.53e-09,22;UBERON:0008836,9.53e-09,22;UBERON:0001474,2.06e-08,22;UBERON:0004765,2.06e-08,22;UBERON:0001434,2.06e-08,22;UBERON:0005172,3.45e-08,49;UBERON:0005173,3.45e-08,49;UBERON:0002417,3.45e-08,49;UBERON:0000916,3.45e-08,49;UBERON:0009854,6.18e-08,23;UBERON:0009856,6.18e-08,23;UBERON:0002365,4.81e-07,25;UBERON:0002330,4.81e-07,25;UBERON:0009569,5.64e-07,66;UBERON:0002100,8.13e-07,90 | |||
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|phase1_expression=0,36.2934423944936,45.0449246995641,3.0246421130683,1.50268718983904,42.9770936094438,72.1863059440174,0,0.140788722151667,0,0,0,0,0,29.646768801594,45.7594104301007,72.0548734471991,4.57420139769445,2.74228867211478,4.66828616977833,1.61582251287033,0.695036658406197,1.30599894569468,30.8785375991275,30.5114343819336,64.8882119449973,58.1528694814751,68.0889095287409,0.190023419456374,0,34.5899596622275,59.0578526317457,46.7449238564273,0,0,0,0.204169356262369,23.8563029520037,14.0640362014284,18.8468547830567,110.587519749831,90.1620040145148,49.0365456561465,6.04304726282771,6.58950052926845,3.48738829107195,15.6478268869608,1.52617609466313,1.75748946187577,5.44403717407994,5.5994568650145,1.43752564364972,0.167782606057736,0,1.34437519656986,10.2903774414379,11.1748041576115,3.09403255366465,0,0,0,5.42151251310611,8.00365316500025,56.2437323300874,25.7105254267413,47.6021677013887,9.28760342607055,3.07374644257244,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0,0,0,0,1.36307147999731,1.36028808192214,9.85539261585705,10.3250865237766,0.679971333707751,7.55584468292944,5.19821133958135,3.13618820968135,2.66844398250329,4.4311883870295,4.93593408745451,12.0135455333516,0.14084341977668,3.84979432242953,2.54805239706646,7.11066703153331,1.29894624606728,1.26679932737549,3.0331466700887,0.5709193985953,3.88406825470758,5.64080128446334,1.90833859442749,1.21786191324856,1.38369298353635,0.904335843315735,1.05829836422134,1.50799909595611,3.21353458054686,0.578397427679647,13.2691582792481,3.23533699894818,12.5879665522424,12.6067565815158,0,1.17112318804619,0.628340120440365,1.78819938646014,6.35020159881377,15.5974710058286,10.5468288470644,0.149790639404823,0.457500602818626,0,0.173824320192276,0,0,0.162241263067758,0.509196819251581,12.1918831197891,0.252722758433675,1.05220927943237,0.130120442962704,0.459804208866946,0.360124259610698,0.30140963567143,0.272145996605311,0.384341160854549,1.03071897015702,0.258703370739016,0.431135985865684,0.378212160335639,1.58356011747554,1.7535658594206,0.834141747676794,1.74126083261083,0,0.199034266818493,15.4486901208912,23.6760074545538,8.52490498186778,1.65700618028402,0.703578179943289,1.08037236876609,0.946978942340841,0.787056926989615,0.771335564436891,0.232533944750408,1.07309360559848,0.700592054203017,1.81015834904829,3.2833492815819,3.40489000092594,4.38599962275997,4.61055242111206,4.2946054003319,0.210289948564127,0.205809224758569,0.660837565967596,0.264450566663544,0.426576501070468,1.39342003116263,0.38660238396628,0.605050573870028,0.444756087689741,0.570676878337677,1.42358718463353,0.494096864172033,0.251335208800269,0.596869416123452,1.16978452271472,0,1.29682829924817,1.7922714592893,0.569003702859245,1.25673363870702,1.1270773567308,0.610953983535943,2.13347735884388,2.17421041659988,5.6280518040589,3.69025369949005,7.22194148070324,5.67626954040282,4.15033677922008,15.5165948315967,13.3660116676978,23.3856596880248,17.6488305607998,23.153007336232,19.3515647353879,19.2756412092043,6.80967952455149,12.3552635934637,14.3768206527355,11.1642284300551,13.1055822708115,10.1031551178845,10.225652570749,4.3419916922703,4.61882975416512,0.568474235311454,0.325929952884052,0,0.234690248288502,0.837531287209079,0.476087281772027,1.56106918286239,2.67979744980525,1.7717175171902,3.34855014180723,8.84861899464985,4.66249451037918,5.64131328467895,122.140939990811,112.588476550473,0.491764273019036,1.37968373152366,0.160550589987792,0.234423373184406,0.655739781506702,6.05930225290495,1.26203287766503,0.390438744296638,0.215423397732799,0,0.445597348164788,0.283076530788832,0,0.584511715822624,0,0,0.99358059645788,1.06839362200353,0.325773918707152,5.27904393512113,0,0.485561272309963,0.302323556964751,0.565815239267694,0.590603785761546,0.614870295887855,0.516856586336442,1.09060118843252,1.78248689192361,1.26414703174326,0,0,2.04263763452273,0.18006109403131,0.517434735131018,0.428674070063185,1.24138163549592,0.535106452806212,0.822745103010605,1.2178597964584,30.5073220482823,7.20229040936989,0.220528398054962,6.10079135883476,0.807322133479528,0.904693873922338,0.716234064018819,0.820704498725306,0.582961673259701,0.18542530201051,17.2579589605831,2.27025554759545,8.14855920426731,28.066900093699,18.7271091977804,26.9958244383697,5.26933132980952,6.29781535456461,5.8043988997858,0.954670618015114,0.632671987162271,0.406638934253697,0.972048067396211,2.29997125615916,3.27543845619266,2.56242258131159,2.23164330458407,1.04702376793612,1.29614973291793,0.621339313086926,0.56369293868419,0.149516546043979,0.330916980914195,0.972255941720238,0.258319646955462,0.337912250981556,0.234714477291508,0.39061315453185,0.209718688851422,0,0.864090018773596,0.632022241256357,1.82452693761148,1.1298205288131,0.389762468933385,1.07416017400489,0.198681354781265,0.721172697119813,0.443068581523732,0.706765149637033,0.228620419965,0.403304740547362,0.779663045918019,0.962118416403295,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| ||
|short_description=p1@Tnfaip2 | |||
}} | }} |
Latest revision as of 08:32, 26 September 2015
Short description: | p1@Tnfaip2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tnfaip2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1074 |
Association with transcript: | 0bp_to_ENSMUST00000021710, ENSMUST00000109792, ENSMUST00000156003, ENSMUST00000172783, NM_009396, uc007pcy.2, uc007pcz.2_5end |
EntrezGene: | Tnfaip2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.68e-08 | 19 |
myeloid cell | 2.81e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.20e-12 | 32 |
mesenchyme | 1.12e-09 | 61 |
entire embryonic mesenchyme | 1.12e-09 | 61 |
trunk mesenchyme | 1.99e-09 | 45 |
bone marrow | 7.58e-09 | 16 |
liver | 9.53e-09 | 22 |
epithelial sac | 9.53e-09 | 22 |
digestive gland | 9.53e-09 | 22 |
epithelium of foregut-midgut junction | 9.53e-09 | 22 |
anatomical boundary | 9.53e-09 | 22 |
hepatobiliary system | 9.53e-09 | 22 |
foregut-midgut junction | 9.53e-09 | 22 |
hepatic diverticulum | 9.53e-09 | 22 |
liver primordium | 9.53e-09 | 22 |
septum transversum | 9.53e-09 | 22 |
liver bud | 9.53e-09 | 22 |
bone element | 2.06e-08 | 22 |
skeletal element | 2.06e-08 | 22 |
skeletal system | 2.06e-08 | 22 |
abdomen element | 3.45e-08 | 49 |
abdominal segment element | 3.45e-08 | 49 |
abdominal segment of trunk | 3.45e-08 | 49 |
abdomen | 3.45e-08 | 49 |
digestive tract diverticulum | 6.18e-08 | 23 |
sac | 6.18e-08 | 23 |
exocrine gland | 4.81e-07 | 25 |
exocrine system | 4.81e-07 | 25 |
subdivision of trunk | 5.64e-07 | 66 |
trunk | 8.13e-07 | 90 |