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FFCP PHASE1:Mm9::chr1:133421746..133421809,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14270
|EntrezGene=14270
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=360bp_to_uc011wrq.1_5end
|association_with_transcript=360bp_to_uc011wrq.1_5end
|cluster_id=chr1:133421746..133421809,-
|description=CAGE_peak_3_at_Srgap2_5end
|description=CAGE_peak_3_at_Srgap2_5end
|id=chr1:133421746..133421809,-
|id=chr1:133421746..133421809,-
|ontology_enrichment_celltype=CL:0000117!3.66e-11!23;CL:0000337!3.66e-11!23;CL:0000540!3.66e-10!33;CL:0000047!3.66e-10!33;CL:0000031!3.66e-10!33;CL:0000404!3.66e-10!33;CL:0000393!8.76e-10!39;CL:0000211!8.76e-10!39;CL:0000221!8.87e-10!44;CL:0000133!8.87e-10!44;CL:0002319!1.26e-09!43;CL:0000055!8.78e-09!50
|ontology_enrichment_celltype=CL:0000117!3.66e-11!23;CL:0000337!3.66e-11!23;CL:0000540!3.66e-10!33;CL:0000047!3.66e-10!33;CL:0000031!3.66e-10!33;CL:0000404!3.66e-10!33;CL:0000393!8.76e-10!39;CL:0000211!8.76e-10!39;CL:0000221!8.87e-10!44;CL:0000133!8.87e-10!44;CL:0002319!1.26e-09!43;CL:0000055!8.78e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.20e-12,23;CL:0000337,3.20e-12,23;CL:0000540,8.00e-11,33;CL:0000047,8.00e-11,33;CL:0000031,8.00e-11,33;CL:0000404,8.00e-11,33;CL:0000393,1.63e-10,39;CL:0000211,1.63e-10,39;CL:0000221,2.03e-09,44;CL:0000133,2.03e-09,44;CL:0002319,3.00e-09,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!8.91e-21!75;UBERON:0001016!8.91e-21!75;UBERON:0001017!1.89e-19!73;UBERON:0005743!1.89e-19!73;UBERON:0004121!1.87e-18!102;UBERON:0000924!1.87e-18!102;UBERON:0006601!1.87e-18!102;UBERON:0002020!2.92e-17!34;UBERON:0001049!1.20e-16!52;UBERON:0005068!1.20e-16!52;UBERON:0006241!1.20e-16!52;UBERON:0007135!1.20e-16!52;UBERON:0000955!1.31e-15!50;UBERON:0006238!1.31e-15!50;UBERON:0000033!2.56e-15!63;UBERON:0002616!4.58e-15!49;UBERON:0002791!7.21e-15!29;UBERON:0003528!7.21e-15!29;UBERON:0001893!7.21e-15!29;UBERON:0002346!3.62e-13!71;UBERON:0003075!3.62e-13!71;UBERON:0007284!3.62e-13!71;UBERON:0003056!7.18e-13!49;UBERON:0003080!7.81e-13!40;UBERON:0002780!2.51e-12!39;UBERON:0001890!2.51e-12!39;UBERON:0006240!2.51e-12!39;UBERON:0000956!5.56e-11!21;UBERON:0001869!5.56e-11!21;UBERON:0000203!5.56e-11!21;UBERON:0000468!6.92e-10!333;UBERON:0002619!3.48e-09!17;UBERON:0000153!4.30e-08!94;UBERON:0002021!1.26e-07!10;UBERON:0000411!1.26e-07!10;UBERON:0001950!1.26e-07!10;UBERON:0007811!2.52e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.81e-20,95;UBERON:0000924,5.81e-20,95;UBERON:0006601,5.81e-20,95;UBERON:0001016,1.79e-19,75;UBERON:0002020,9.00e-19,34;UBERON:0001017,4.32e-18,73;UBERON:0010371,7.21e-17,73;UBERON:0000073,1.06e-16,54;UBERON:0003528,4.07e-16,29;UBERON:0002791,4.07e-16,29;UBERON:0001893,4.07e-16,29;UBERON:0001049,8.35e-16,52;UBERON:0005068,8.35e-16,52;UBERON:0006241,8.35e-16,52;UBERON:0007135,8.35e-16,52;UBERON:0002346,2.34e-15,64;UBERON:0003075,2.34e-15,64;UBERON:0007284,2.34e-15,64;UBERON:0000955,2.28e-13,47;UBERON:0006238,2.28e-13,47;UBERON:0002616,8.30e-13,46;UBERON:0003080,5.05e-12,40;UBERON:0000956,8.35e-12,21;UBERON:0001869,8.35e-12,21;UBERON:0000203,8.35e-12,21;UBERON:0003056,1.03e-11,49;UBERON:0002780,1.74e-11,39;UBERON:0001890,1.74e-11,39;UBERON:0006240,1.74e-11,39;UBERON:0002619,8.20e-10,17;UBERON:0010314,1.21e-08,92;UBERON:0002021,2.69e-08,10;UBERON:0000411,2.69e-08,10;UBERON:0001950,2.69e-08,10
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|phase1_expression=1.76163731815273,0,0,0,0,0.16787927191189,0,0.129123323441576,0.140788722151667,0.468129052643987,0.171217968225505,0,0,0,0,0,0.699561878128147,0.315462165358238,0,0,3.40173160604279,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,2.14024590558481,2.83855407414641,0.183546752161682,0.782391344348039,0.436050312760893,3.29529274101708,0.58328969722285,0.979904951377538,2.87505128729943,0,0,0,2.05807548828758,1.43266719969378,4.64104883049698,8.29497489524351,13.7537654610729,8.87363964908651,0.677689064138264,2.66788438833342,1.3498495759221,3.9554654502679,2.1314403448383,2.39680088414724,0.768436610643109,7.36196247390191,5.40023753326763,6.09942387919008,3.71346279724945,8.1721360152097,9.67677313798137,6.22995561618536,4.5960939330501,4.40463523997555,8.17198963745201,7.37311359629969,10.2871304429551,11.8019060247108,11.9810075228055,5.30447698102624,6.75315132038016,4.73674568108111,13.258286346315,12.5287079103211,10.6247684120421,23.7022985132866,14.81202578093,6.95674772884027,0,0,0,0.649776417447669,0.448026887097336,0.983110940922263,0.511290967734173,0.259786004602869,0,2.95771181531029,1.28326477414318,0,0,0.432982082022428,0.253359865475099,0,0.34255163915718,5.69663344023778,0.29688427812965,0.867426633830679,0,0.230615497256059,0.301445281105245,1.88141931417128,0.376999773989026,0.494389935468748,3.03658649531814,0,3.39710384889559,1.32504911076236,3.87900202508178,0,13.1751358655196,28.065858713003,0.510914110417183,0,0,0.254140454146129,10.1857634795279,11.4375150704657,16.0837570704466,16.339486098074,15.5986428971502,8.72709787150152,15.412919991437,1.73126918545538,4.10543003013307,2.0217820674694,0.210441855886474,0.780722657776222,0.919608417733892,2.34080768746954,2.41127708537144,4.49040894398764,7.55870949680614,5.62210347358373,3.88055056108524,0.862271971731369,1.70195472151037,2.11141348996739,1.97276159184817,1.11218899690239,5.2237824978325,3.49829631893504,0.995171334092466,0,0,0,1.03562886267751,0.938104239924385,0.36012412292203,0.473489471170421,1.37734962223183,0.462801338662135,1.62773761325285,0.536546802799238,1.28441876603886,0.987359099480883,0.492502392237286,1.29710095273369,0.584799949701329,0.439100230582101,1.07365135008297,18.5055154736432,23.4622516224768,0,0.264450566663544,0.639864751605702,0.696710015581316,0.38660238396628,0.80673409849337,0.889512175379481,0.190225626112559,0,0.164698954724011,1.75934646160189,2.98434708061726,0.38992817423824,0,0.432276099749388,0,0.758671603812327,0.799739588268102,2.25415471346161,1.22190796707189,1.55161989734101,2.03393877681924,1.13825766823663,0.590440591918409,0.941992367048249,1.23397163921801,0,0,1.17935397067922,0.449724224769707,0.608580364165509,0.964708639009667,0.25462585178142,0.287696137450811,2.2698931748505,1.64736847912849,2.87536413054709,2.23284568601102,0.624075346229121,1.01031551178845,0.358794827043824,1.92977408545347,2.03228509183265,0.947457058852424,0.814824882210129,0.169745085775188,0.469380496577004,0.167506257441816,0.238043640886014,2.92700471786698,0.945810864637146,1.99318220683897,1.59454768657487,0.81931657357869,1.38147985492716,1.73578870297814,13.5712155545345,25.0196614556606,0,0.551873492609465,6.10092241953609,7.14991288212439,0.491804836130026,0.757412781613119,1.57754109708128,1.56175497718655,1.50796378412959,2.86762557543062,2.00518806674155,6.51076020814315,2.02405350837447,1.16902343164525,0.790575555893047,11.2462460747632,1.84522110770749,0.890328018336276,1.62886959353576,0.989820737835213,2.65490276679926,1.21390318077491,0.906970670894253,1.50884063804718,1.18120757152309,2.76691633149535,1.80899805217755,3.27180356529755,1.78248689192361,2.21225730555071,1.05418608574999,2.06271086496374,1.02131881726136,0.900305470156551,0.776152102696527,0.428674070063185,0.886701168211368,0.891844088010353,0.987294123612726,1.522324745573,2.81606049676452,0.63549621259146,1.10264199027481,7.09010887648364,8.88054346827481,4.82503399425247,7.28171298419132,14.6085400773105,1.45740418314925,6.67531087237835,0.341741761595705,0.82554747185289,1.48155621895769,0.188368457004691,1.0935538217682,0.457556346413045,0.339956859987711,0.139951452323658,0,3.81868247206045,0.158167996790568,0.813277868507395,1.08005340821801,0.836353184057875,1.52853794622324,1.34864346384821,1.98368293740806,1.30877970992015,0.129614973291793,0.621339313086926,0,0.598066184175915,0.330916980914195,0.388902376688095,0.258319646955462,0.844780627453891,0.58678619322877,0.13020438484395,1.67774951081137,0.241584120826006,1.72818003754719,2.21207784439725,0,0.924398614483445,0.649604114888975,0.716106782669926,0.79472541912506,0.240390899039938,0.886137163047463,0.504832249740738,1.06689529317,0.705783295957884,0.974578807397524,1.44317762460494,0.701261413089414,1.36038230169127,0.221985953374065,0.0897138566094757,0.167884616364078,2.12508553435409,3.75364950902364,1.46521299413812,0.643105137237198,1.00314420807073,22.5900737046827,22.5559365888517,30.363462212288,13.5764014051513,13.0165678756422,14.3524840504043,15.5255175053315,18.463169332193,15.406841905463,10.8729665467882,0.31136204275253,1.19707462020309,2.90247129782028,2.91728060481953,3.14419743941973,3.67687016900028,4.00044110042907,3.5025959730612,6.4183841918363,2.77966932940177,5.0695859978048,5.09291121742406,3.83930180626518,4.09760975391163,4.47996657853783,5.23923060411381,4.86714168968393,3.47236596834669,4.12085900803307,5.00476328456951,5.82877729055206,3.19456451086807,6.19934093863034,4.21504608233753,5.27012530325851,4.65380343404221,5.12198324043763,5.78753365163254,4.75314398460516,4.48913817326191,4.27086065247027,2.56111654176465,3.6830793885272,5.11291575913688,4.05103883060397,8.49355964989016,3.74290573512653,5.80151845930405,6.88637995447836,1.98532277207564,3.01428186306548
|short_description=p3@Srgap2
|short_description=p3@Srgap2
}}
}}

Latest revision as of 08:26, 26 September 2015

Short description:p3@Srgap2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Srgap2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 360bp_to_uc011wrq.1_5end
EntrezGene:Srgap2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Srgap2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.84
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C38.29
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.36
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.40
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.17
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.68
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.23
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.29
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.80
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.26
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.62
Mouse Schwann, donor1.CNhs12507.11728-123D923.70
Mouse Schwann, donor2.CNhs12573.11746-123F914.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H95.70
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H13.04
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F53.40
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B213.18
cerebellum, neonate N30.CNhs11135.1395-42I228.07
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A410.19
corpus striatum, adult.CNhs10487.19-21D811.44
corpus striatum, neonate N00.CNhs11226.630-43F116.08
cortex, adult.CNhs10473.12-14D516.34
cortex, neonate N30.CNhs11107.1392-42F215.60
diencephalon, adult.CNhs10482.20-12F28.73
diencephalon, neonate N30.CNhs11201.1388-42B215.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.11
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C64.49
eyeball, neonate N01.CNhs11140.1532-43E77.56
eyeball, neonate N02.CNhs11205.1551-44G85.62
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C45.22
forelimb, embryo E18.CNhs11008.1520-43B53.50
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E818.51
hippocampus, neonate N00.CNhs11228.627-43G123.46
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G72.03
kidney, neonate N10.CNhs11206.758-6D51.14
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A125.02
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C26.10
medulla oblongata, neonate N30.CNhs11200.1396-42A37.15
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.51
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I911.25
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C37.09
skin, neonate N00.CNhs11124.650-25G48.88
skin, neonate N03.CNhs11215.662-22H34.83
skin, neonate N06.CNhs11097.693-20I57.28
skin, neonate N10.CNhs11108.762-6C414.61
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C96.68
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.98
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D91.68
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.59
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.56
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A330.36
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A615.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F23.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.10
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.27
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.11
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I58.49
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C25.80
whole body, neonate N01.CNhs10576.659-23C66.89
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.20e-1223
neuroblast (sensu Vertebrata)3.20e-1223
neuron8.00e-1133
neuronal stem cell8.00e-1133
neuroblast8.00e-1133
electrically signaling cell8.00e-1133
electrically responsive cell1.63e-1039
electrically active cell1.63e-1039
ectodermal cell2.03e-0944
neurectodermal cell2.03e-0944
neural cell3.00e-0943

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure5.81e-2095
ectoderm5.81e-2095
presumptive ectoderm5.81e-2095
nervous system1.79e-1975
gray matter9.00e-1934
central nervous system4.32e-1873
ecto-epithelium7.21e-1773
regional part of nervous system1.06e-1654
brain grey matter4.07e-1629
regional part of telencephalon4.07e-1629
telencephalon4.07e-1629
neural tube8.35e-1652
neural rod8.35e-1652
future spinal cord8.35e-1652
neural keel8.35e-1652
neurectoderm2.34e-1564
neural plate2.34e-1564
presumptive neural plate2.34e-1564
brain2.28e-1347
future brain2.28e-1347
regional part of brain8.30e-1346
anterior neural tube5.05e-1240
cerebral cortex8.35e-1221
cerebral hemisphere8.35e-1221
pallium8.35e-1221
pre-chordal neural plate1.03e-1149
regional part of forebrain1.74e-1139
forebrain1.74e-1139
future forebrain1.74e-1139
regional part of cerebral cortex8.20e-1017
structure with developmental contribution from neural crest1.21e-0892
occipital lobe2.69e-0810
visual cortex2.69e-0810
neocortex2.69e-0810
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