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FFCP PHASE1:Mm9::chr17:34740422..34740433,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:34740422..34740433,-
|DHSsupport=NA
|short_description=p5@Rnf5
|DPIdataset=NA
|description=CAGE_peak_5_at_Rnf5_5end
|association_with_transcript=72bp_to_NM_019403,uc008ccy.1_5end
|EntrezGene=54197
|EntrezGene=54197
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=O35445
|UniProt=O35445
|association_with_transcript=72bp_to_NM_019403,uc008ccy.1_5end
|cluster_id=chr17:34740422..34740433,-
|description=CAGE_peak_5_at_Rnf5_5end
|id=chr17:34740422..34740433,-
|ontology_enrichment_celltype=CL:0000540!5.05e-09!33;CL:0000047!5.05e-09!33;CL:0000031!5.05e-09!33;CL:0000404!5.05e-09!33;CL:0000117!3.68e-08!23;CL:0000337!3.68e-08!23;CL:0000221!5.22e-08!44;CL:0000133!5.22e-08!44;CL:0002319!1.54e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,9.37e-11,23;CL:0000337,9.37e-11,23;CL:0000540,5.01e-09,33;CL:0000047,5.01e-09,33;CL:0000031,5.01e-09,33;CL:0000404,5.01e-09,33;CL:0000221,1.18e-08,44;CL:0000133,1.18e-08,44;CL:0002319,6.75e-08,43;CL:0000393,6.98e-07,39;CL:0000211,6.98e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.58e-12!73;UBERON:0005743!1.58e-12!73;UBERON:0000073!2.06e-12!75;UBERON:0001016!2.06e-12!75;UBERON:0004121!1.04e-11!102;UBERON:0000924!1.04e-11!102;UBERON:0006601!1.04e-11!102;UBERON:0002346!2.39e-10!71;UBERON:0003075!2.39e-10!71;UBERON:0007284!2.39e-10!71;UBERON:0003056!4.62e-09!49;UBERON:0001049!8.28e-09!52;UBERON:0005068!8.28e-09!52;UBERON:0006241!8.28e-09!52;UBERON:0007135!8.28e-09!52;UBERON:0002020!1.87e-08!34;UBERON:0003080!5.73e-08!40;UBERON:0002780!6.14e-08!39;UBERON:0001890!6.14e-08!39;UBERON:0006240!6.14e-08!39;UBERON:0000033!6.76e-08!63;UBERON:0000955!4.70e-07!50;UBERON:0006238!4.70e-07!50
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.50e-14,73;UBERON:0001016,2.46e-13,75;UBERON:0004121,2.20e-12,95;UBERON:0000924,2.20e-12,95;UBERON:0006601,2.20e-12,95;UBERON:0002346,1.00e-11,64;UBERON:0003075,1.00e-11,64;UBERON:0007284,1.00e-11,64;UBERON:0010371,5.33e-11,73;UBERON:0002020,2.42e-10,34;UBERON:0000073,2.78e-10,54;UBERON:0001049,4.68e-10,52;UBERON:0005068,4.68e-10,52;UBERON:0006241,4.68e-10,52;UBERON:0007135,4.68e-10,52;UBERON:0003056,4.17e-09,49;UBERON:0002780,1.06e-08,39;UBERON:0001890,1.06e-08,39;UBERON:0006240,1.06e-08,39;UBERON:0003080,2.40e-08,40;UBERON:0010314,4.19e-08,92;UBERON:0001948,5.99e-08,5;UBERON:0002315,5.99e-08,5;UBERON:0000369,1.90e-07,5;UBERON:0002435,1.90e-07,5;UBERON:0000204,1.90e-07,5;UBERON:0010082,1.90e-07,5;UBERON:0000955,3.01e-07,47;UBERON:0006238,3.01e-07,47
|phase1_expression=1.28119077683835,0.697950815278722,1.81999695755814,0.30246421130683,0.500895729946347,1.00727563147134,0.467225281191051,0.387369970324729,0.422366166455,0.468129052643987,0,0.0797721589953364,0.171200729931206,0.437102012094987,0,0.202475267389826,0,0.315462165358238,0,0,0.680346321208558,1.29078236561151,1.30599894569468,0.639969691173627,0.91763712426868,1.72269589234506,0.86152399231815,1.07735616342945,0,0,0.886922042621219,0,0,0,0,0.166234645358492,0.204169356262369,0.837063261473815,0,1.0470474879476,0,0,0,0.125896817975577,0.405507724878058,0.367093504323363,0,0.65407546914134,0.659058548203415,0.194429899074283,0,0,0.167782606057736,0,0,0,0,0,3.03474691289397,3.1739458756322,5.07065122804943,1.69422266034566,0,3.5995988691256,1.97773272513395,0.7104801149461,4.49400165777607,6.14749288514487,1.14058573539325,0.945041568321835,0,4.28476476605705,3.09215957332259,0.979926393719632,0.958454710182364,1.83843757322004,1.10115880999389,0.766124028511126,0.46081959976873,2.63772575460388,3.56801810049398,4.16730696445408,0.279182999001381,1.12552522006336,0.30559649555362,4.41942878210502,1.70846016958924,3.16879057903011,0.37863096666592,0.604572480854284,0,0,0.679971333707751,0.539703191637817,0,0.448026887097336,0.280888840263504,0.170430322578058,0.259786004602869,0.70667914902068,2.53518155598025,0,0,0,0.432982082022428,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0.693941307064543,0.608930956624282,0.230615497256059,0.753613202763113,0.587943535678524,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0,0,0.510914110417183,0.599075622529601,0,0.762421362438388,0.599162557619291,1.37250180845588,2.26177833803156,0.869121600961382,1.53429274398198,0.62336413367868,1.1356888414743,0.407357455401265,0.622034853050465,0.758168275301024,0.420883711772948,1.43132487258974,1.60931473103431,0.720248519221397,1.35634336052144,1.02054748726992,0.640568601424249,0.187403449119458,0.517406741478031,0.646703978798527,0.945530400839096,1.58356011747554,0.876782929710299,1.39023624612799,0,0.205782136407943,0.796137067273973,0.702213187313235,0.257347907114715,0.284163499395593,1.03562886267751,1.17263029990548,0.540186184383045,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.350296027101508,0.493679549740441,0.492502392237286,0.0810688095458557,0.438599962275997,0.219550115291051,0,1.68231958851302,0.823236899034275,0,0,1.70630600428187,0.928946687441754,0.38660238396628,0.403367049246685,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0.397912944082302,0,0,0,0,1.70701110857774,0.456994050438915,0,1.83286195060783,1.16371492300575,0.771494018793504,0.632365371242573,0.590440591918409,0.156998727841375,0.740382983530803,0.296452627087149,0.166845105716094,0.786235980452812,0,0.608580364165509,0,0.50925170356284,0.287696137450811,0.162135226775035,1.09824565275233,2.87536413054709,0.744281895337007,0.624075346229121,1.01031551178845,0.717589654087649,1.92977408545347,0,0.757965647081939,0.651859905768103,0.509235257325564,0.469380496577004,0.335012514883631,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.144649058581512,1.50791283939272,1.08781136763742,0.491764273019036,0.827810238914197,0.481651769963376,0.586058432961016,0.327869890753351,0,0.94652465824877,1.17131623288992,1.07711698866399,0.238968797952552,0.668396022247182,0.283076530788832,0.809621403349789,0.584511715822624,0.790575555893047,2.57057053137446,0.283880170416537,0.534196811001766,0,0.329940245945071,0,0.728341908464944,0.302323556964751,0.754420319023592,0.295301892880773,0.614870295887855,0,0,0,0.316036757935816,0,0,0,1.98067203434441,1.81102157295856,1.50035924522115,0.886701168211368,0.535106452806212,1.48094118541909,2.13125464380219,0.23467170806371,0,0.220528398054962,0.8244312647074,0.322928853391811,0.301564624640779,0.238744688006273,0.328281799490123,0.582961673259701,0.927126510052548,0.170870880797853,0.82554747185289,0.185194527369712,0.188368457004691,0.410082683163076,0.228778173206523,0,0,0.276399947608848,0.954670618015114,1.10717597753397,0.609958401380546,0.432021363287205,0.627264888043406,0.655087691238533,0.134864346384821,0,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0.165458490457098,0.583353565032143,0.387479470433193,0.337912250981556,0.234714477291508,0.13020438484395,0.314578033277133,0,0,0,0.608175645870493,0.616265742988964,0.51968329191118,0.358053391334963,0.993406773906324,0.240390899039938,1.03382669022204,0.605798699688886,0.533447646584999,0.403304740547362,0.194915761479505,0.577271049841977,0.584384510907845,0,0.221985953374065,0,0,0.19318959403219,0.375364950902364,0.549454872801795,0.214368379079066,1.00314420807073,3.3885110557024,1.38097570952153,2.86447756719698,2.23409137046794,0,0.755393897389701,0.675022500231806,0,2.71885445390523,0.51776031175182,1.55681021376265,2.39414924040619,0.682934423016537,0,1.46729213839588,0.183843508450014,1.33348036680969,0.2060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|phase1_expression=1.28119077683835,0.697950815278722,1.81999695755814,0.30246421130683,0.500895729946347,1.00727563147134,0.467225281191051,0.387369970324729,0.422366166455,0.468129052643987,0,0.0797721589953364,0.171200729931206,0.437102012094987,0,0.202475267389826,0,0.315462165358238,0,0,0.680346321208558,1.29078236561151,1.30599894569468,0.639969691173627,0.91763712426868,1.72269589234506,0.86152399231815,1.07735616342945,0,0,0.886922042621219,0,0,0,0,0.166234645358492,0.204169356262369,0.837063261473815,0,1.0470474879476,0,0,0,0.125896817975577,0.405507724878058,0.367093504323363,0,0.65407546914134,0.659058548203415,0.194429899074283,0,0,0.167782606057736,0,0,0,0,0,3.03474691289397,3.1739458756322,5.07065122804943,1.69422266034566,0,3.5995988691256,1.97773272513395,0.7104801149461,4.49400165777607,6.14749288514487,1.14058573539325,0.945041568321835,0,4.28476476605705,3.09215957332259,0.979926393719632,0.958454710182364,1.83843757322004,1.10115880999389,0.766124028511126,0.46081959976873,2.63772575460388,3.56801810049398,4.16730696445408,0.279182999001381,1.12552522006336,0.30559649555362,4.41942878210502,1.70846016958924,3.16879057903011,0.37863096666592,0.604572480854284,0,0,0.679971333707751,0.539703191637817,0,0.448026887097336,0.280888840263504,0.170430322578058,0.259786004602869,0.70667914902068,2.53518155598025,0,0,0,0.432982082022428,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0.693941307064543,0.608930956624282,0.230615497256059,0.753613202763113,0.587943535678524,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0,0,0.510914110417183,0.599075622529601,0,0.762421362438388,0.599162557619291,1.37250180845588,2.26177833803156,0.869121600961382,1.53429274398198,0.62336413367868,1.1356888414743,0.407357455401265,0.622034853050465,0.758168275301024,0.420883711772948,1.43132487258974,1.60931473103431,0.720248519221397,1.35634336052144,1.02054748726992,0.640568601424249,0.187403449119458,0.517406741478031,0.646703978798527,0.945530400839096,1.58356011747554,0.876782929710299,1.39023624612799,0,0.205782136407943,0.796137067273973,0.702213187313235,0.257347907114715,0.284163499395593,1.03562886267751,1.17263029990548,0.540186184383045,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.350296027101508,0.493679549740441,0.492502392237286,0.0810688095458557,0.438599962275997,0.219550115291051,0,1.68231958851302,0.823236899034275,0,0,1.70630600428187,0.928946687441754,0.38660238396628,0.403367049246685,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0.397912944082302,0,0,0,0,1.70701110857774,0.456994050438915,0,1.83286195060783,1.16371492300575,0.771494018793504,0.632365371242573,0.590440591918409,0.156998727841375,0.740382983530803,0.296452627087149,0.166845105716094,0.786235980452812,0,0.608580364165509,0,0.50925170356284,0.287696137450811,0.162135226775035,1.09824565275233,2.87536413054709,0.744281895337007,0.624075346229121,1.01031551178845,0.717589654087649,1.92977408545347,0,0.757965647081939,0.651859905768103,0.509235257325564,0.469380496577004,0.335012514883631,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.144649058581512,1.50791283939272,1.08781136763742,0.491764273019036,0.827810238914197,0.481651769963376,0.586058432961016,0.327869890753351,0,0.94652465824877,1.17131623288992,1.07711698866399,0.238968797952552,0.668396022247182,0.283076530788832,0.809621403349789,0.584511715822624,0.790575555893047,2.57057053137446,0.283880170416537,0.534196811001766,0,0.329940245945071,0,0.728341908464944,0.302323556964751,0.754420319023592,0.295301892880773,0.614870295887855,0,0,0,0.316036757935816,0,0,0,1.98067203434441,1.81102157295856,1.50035924522115,0.886701168211368,0.535106452806212,1.48094118541909,2.13125464380219,0.23467170806371,0,0.220528398054962,0.8244312647074,0.322928853391811,0.301564624640779,0.238744688006273,0.328281799490123,0.582961673259701,0.927126510052548,0.170870880797853,0.82554747185289,0.185194527369712,0.188368457004691,0.410082683163076,0.228778173206523,0,0,0.276399947608848,0.954670618015114,1.10717597753397,0.609958401380546,0.432021363287205,0.627264888043406,0.655087691238533,0.134864346384821,0,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0.165458490457098,0.583353565032143,0.387479470433193,0.337912250981556,0.234714477291508,0.13020438484395,0.314578033277133,0,0,0,0.608175645870493,0.616265742988964,0.51968329191118,0.358053391334963,0.993406773906324,0.240390899039938,1.03382669022204,0.605798699688886,0.533447646584999,0.403304740547362,0.194915761479505,0.577271049841977,0.584384510907845,0,0.221985953374065,0,0,0.19318959403219,0.375364950902364,0.549454872801795,0.214368379079066,1.00314420807073,3.3885110557024,1.38097570952153,2.86447756719698,2.23409137046794,0,0.755393897389701,0.675022500231806,0,2.71885445390523,0.51776031175182,1.55681021376265,2.39414924040619,0.682934423016537,0,1.46729213839588,0.183843508450014,1.33348036680969,0.2060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|short_description=p5@Rnf5
}}
}}

Latest revision as of 08:25, 26 September 2015

Short description:p5@Rnf5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Rnf5_5end
Coexpression cluster:NA
Association with transcript: 72bp_to_NM_019403, uc008ccy.1_5end
EntrezGene:Rnf5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Rnf5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E86.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.37e-1123
neuroblast (sensu Vertebrata)9.37e-1123
neuron5.01e-0933
neuronal stem cell5.01e-0933
neuroblast5.01e-0933
electrically signaling cell5.01e-0933
ectodermal cell1.18e-0844
neurectodermal cell1.18e-0844
neural cell6.75e-0843
electrically responsive cell6.98e-0739
electrically active cell6.98e-0739

Uber anatomy
Ontology termp-valuen
central nervous system5.50e-1473
nervous system2.46e-1375
ectoderm-derived structure2.20e-1295
ectoderm2.20e-1295
presumptive ectoderm2.20e-1295
neurectoderm1.00e-1164
neural plate1.00e-1164
presumptive neural plate1.00e-1164
ecto-epithelium5.33e-1173
gray matter2.42e-1034
regional part of nervous system2.78e-1054
neural tube4.68e-1052
neural rod4.68e-1052
future spinal cord4.68e-1052
neural keel4.68e-1052
pre-chordal neural plate4.17e-0949
regional part of forebrain1.06e-0839
forebrain1.06e-0839
future forebrain1.06e-0839
anterior neural tube2.40e-0840
structure with developmental contribution from neural crest4.19e-0892
regional part of spinal cord5.99e-085
gray matter of spinal cord5.99e-085
corpus striatum1.90e-075
striatum1.90e-075
ventral part of telencephalon1.90e-075
future corpus striatum1.90e-075
brain3.01e-0747
future brain3.01e-0747
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