FFCP PHASE1:Mm9::chr17:34734797..34734813,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11596 | |EntrezGene=11596 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=32 | |||
|TSSclassifier=NA | |||
|UniProt=O35444,C5H3H7,C5H3H4,C5H7W4,C5H7W9 | |UniProt=O35444,C5H3H7,C5H3H4,C5H7W4,C5H7W9 | ||
|association_with_transcript=0bp_to_ENSMUST00000015596,ENSMUST00000174496,NM_007425,uc008ccw.2,uc008ccx.1,uc012aqe.1,uc012aqf.1,uc012aqg.1_5end | |association_with_transcript=0bp_to_ENSMUST00000015596,ENSMUST00000174496,NM_007425,uc008ccw.2,uc008ccx.1,uc012aqe.1,uc012aqf.1,uc012aqg.1_5end | ||
|cluster_id=chr17:34734797..34734813,+ | |||
|description=CAGE_peak_1_at_Ager_5end | |description=CAGE_peak_1_at_Ager_5end | ||
|id=chr17:34734797..34734813,+ | |id=chr17:34734797..34734813,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!1.67e-11!14;UBERON:0000117!1.67e-11!14;UBERON:0000171!1.67e-11!14;UBERON:0000170!1.67e-11!14;UBERON:0005597!1.67e-11!14;UBERON:0000118!1.67e-11!14;UBERON:0005178!4.43e-11!17;UBERON:0005181!4.43e-11!17;UBERON:0002224!4.43e-11!17;UBERON:0000915!4.43e-11!17;UBERON:0008947!4.43e-11!17;UBERON:0003258!4.43e-11!17;UBERON:0005153!2.13e-10!17 | |ontology_enrichment_uberon=UBERON:0002048!1.67e-11!14;UBERON:0000117!1.67e-11!14;UBERON:0000171!1.67e-11!14;UBERON:0000170!1.67e-11!14;UBERON:0005597!1.67e-11!14;UBERON:0000118!1.67e-11!14;UBERON:0005178!4.43e-11!17;UBERON:0005181!4.43e-11!17;UBERON:0002224!4.43e-11!17;UBERON:0000915!4.43e-11!17;UBERON:0008947!4.43e-11!17;UBERON:0003258!4.43e-11!17;UBERON:0005153!2.13e-10!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,4.34e-19,14;UBERON:0000117,4.34e-19,14;UBERON:0000171,4.34e-19,14;UBERON:0000170,4.34e-19,14;UBERON:0005597,4.34e-19,14;UBERON:0000118,4.34e-19,14;UBERON:0005153,6.75e-15,17;UBERON:0005178,6.75e-15,17;UBERON:0005181,6.75e-15,17;UBERON:0002224,6.75e-15,17;UBERON:0000915,6.75e-15,17;UBERON:0008947,6.75e-15,17;UBERON:0003258,6.75e-15,17;UBERON:0005157,5.51e-12,20;UBERON:0000310,4.33e-08,6;UBERON:0001443,4.33e-08,6 | |||
|phase1_expression=0.320297694209588,0.348975407639361,1.36499771816861,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,160.56173180522,0,0,1.27993938234725,1.37645568640302,0.57423196411502,0,1.29282739611533,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,1.82478476195126,1.65192076945513,4.69434806608824,0.65407546914134,0.219686182734472,0.777719596297134,0,1.43752564364972,0,0,0,0.257259436035947,0.85960031981627,0,0,0,0,0,0.889294796111139,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0,0,0.869593466105033,0,0,0,0,0,13.7635531729117,0,0,0,0.704217098883403,0,2.54805239706646,0,0.216491041011214,0.253359865475099,0.505524445014783,32.5424057199321,0.517875767294343,0,0.346970653532272,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,2.13862664085664,0.373220911830279,1.26361379216837,0.210441855886474,0.130120442962704,0.229902104433473,0.180062129805349,0,0,0.12811372028485,0.374806898238915,0,0,0,0,0,0,0,0.411564272815887,0.796137067273973,0,0,0,0,0,1.62055855314913,0.23674473558521,0,0,0.465067889500816,7.24338183778972,0.817357396570186,0,0,0.162137619091711,0,0.219550115291051,0,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.379335801906163,0.228497025219458,2.25415471346161,1.4255592949172,0.581857461502877,1.33258057791605,1.07502113111237,0.590440591918409,0,0.246794327843601,0,0.500535317148282,0.196558995113203,0,0,0,14.2590476997595,23.0156909960649,0.648540907100142,0.274561413188081,1.43768206527355,39.0747995051929,0,0,0,0.482443521363367,1021.50038843116,1.70542270593436,7.33342393989116,25.1222726947278,74.1621184591667,314.911763990614,608.677589745537,711.652413737392,515.624556371351,566.063746742269,698.571341488451,945.327462595092,1113.30007808943,1289.25705913701,0,0,0.491764273019036,0,0,0.234423373184406,0,0,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0,0,0,1.24645922567079,0,0.329940245945071,1.32745138339963,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0,0.727067458955011,0,0.316036757935816,0,0,0,0.36012218806262,0.258717367565509,1.28602221018955,0.354680467284547,0.356737635204141,0.658196082408484,0.913394847343798,0.23467170806371,2.75381692122966,0.441056796109924,0,0,0.0603129249281559,0,0,0,0,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0.645799117388655,0.168956125490778,0.352071715937262,0.5208175393758,0,0,0,0,1.01362607645082,0.718976700153791,0.129920822977795,0.358053391334963,0.596044064343795,0.600977247599844,0.147689527174577,0.302899349844443,0.304827226619999,0,0.0974578807397524,0.481059208201647,0.116876902181569,0,0,0,0.167884616364078,0.579568782096571,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.972426868273176,0.419226325255965,2.02227859295016,22.4469195079631,22.6638562962784,26.6362943961207,24.7643267528522,26.1083678886947,24.710050721576,23.5976598824104,24.5856585234698,22.8593166443341,20.0043350338891,24.6833614262542,31.8300213765113,20.192209139362,25.6126121033851,27.4295401908332,21.6520483514392,26.4664170841526,21.5112696615846,26.5388452771232,24.7074655043695,25.0611322835698,24.4654831637194,22.8150911261048,11.2228454331548,24.6760837698282,23.4440668053841,19.2338590289754,23.3954630190809,20.8339139859633,0.249810577937946,26.902134971222,24.0655580534094,0.191288332068843,0.220591419119515,0 | |phase1_expression=0.320297694209588,0.348975407639361,1.36499771816861,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,160.56173180522,0,0,1.27993938234725,1.37645568640302,0.57423196411502,0,1.29282739611533,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,1.82478476195126,1.65192076945513,4.69434806608824,0.65407546914134,0.219686182734472,0.777719596297134,0,1.43752564364972,0,0,0,0.257259436035947,0.85960031981627,0,0,0,0,0,0.889294796111139,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0,0,0.869593466105033,0,0,0,0,0,13.7635531729117,0,0,0,0.704217098883403,0,2.54805239706646,0,0.216491041011214,0.253359865475099,0.505524445014783,32.5424057199321,0.517875767294343,0,0.346970653532272,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,2.13862664085664,0.373220911830279,1.26361379216837,0.210441855886474,0.130120442962704,0.229902104433473,0.180062129805349,0,0,0.12811372028485,0.374806898238915,0,0,0,0,0,0,0,0.411564272815887,0.796137067273973,0,0,0,0,0,1.62055855314913,0.23674473558521,0,0,0.465067889500816,7.24338183778972,0.817357396570186,0,0,0.162137619091711,0,0.219550115291051,0,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.379335801906163,0.228497025219458,2.25415471346161,1.4255592949172,0.581857461502877,1.33258057791605,1.07502113111237,0.590440591918409,0,0.246794327843601,0,0.500535317148282,0.196558995113203,0,0,0,14.2590476997595,23.0156909960649,0.648540907100142,0.274561413188081,1.43768206527355,39.0747995051929,0,0,0,0.482443521363367,1021.50038843116,1.70542270593436,7.33342393989116,25.1222726947278,74.1621184591667,314.911763990614,608.677589745537,711.652413737392,515.624556371351,566.063746742269,698.571341488451,945.327462595092,1113.30007808943,1289.25705913701,0,0,0.491764273019036,0,0,0.234423373184406,0,0,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0,0,0,1.24645922567079,0,0.329940245945071,1.32745138339963,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0,0.727067458955011,0,0.316036757935816,0,0,0,0.36012218806262,0.258717367565509,1.28602221018955,0.354680467284547,0.356737635204141,0.658196082408484,0.913394847343798,0.23467170806371,2.75381692122966,0.441056796109924,0,0,0.0603129249281559,0,0,0,0,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0.645799117388655,0.168956125490778,0.352071715937262,0.5208175393758,0,0,0,0,1.01362607645082,0.718976700153791,0.129920822977795,0.358053391334963,0.596044064343795,0.600977247599844,0.147689527174577,0.302899349844443,0.304827226619999,0,0.0974578807397524,0.481059208201647,0.116876902181569,0,0,0,0.167884616364078,0.579568782096571,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.972426868273176,0.419226325255965,2.02227859295016,22.4469195079631,22.6638562962784,26.6362943961207,24.7643267528522,26.1083678886947,24.710050721576,23.5976598824104,24.5856585234698,22.8593166443341,20.0043350338891,24.6833614262542,31.8300213765113,20.192209139362,25.6126121033851,27.4295401908332,21.6520483514392,26.4664170841526,21.5112696615846,26.5388452771232,24.7074655043695,25.0611322835698,24.4654831637194,22.8150911261048,11.2228454331548,24.6760837698282,23.4440668053841,19.2338590289754,23.3954630190809,20.8339139859633,0.249810577937946,26.902134971222,24.0655580534094,0.191288332068843,0.220591419119515,0 | ||
|short_description=p1@Ager | |short_description=p1@Ager | ||
}} | }} |
Latest revision as of 08:24, 26 September 2015
Short description: | p1@Ager |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ager_5end |
Coexpression cluster: | MCL_coexpression_mm9:32 |
Association with transcript: | 0bp_to_ENSMUST00000015596, ENSMUST00000174496, NM_007425, uc008ccw.2, uc008ccx.1, uc012aqe.1, uc012aqf.1, uc012aqg.1_5end |
EntrezGene: | Ager |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 4.34e-19 | 14 |
respiratory tube | 4.34e-19 | 14 |
respiration organ | 4.34e-19 | 14 |
pair of lungs | 4.34e-19 | 14 |
lung primordium | 4.34e-19 | 14 |
lung bud | 4.34e-19 | 14 |
epithelial bud | 6.75e-15 | 17 |
thoracic cavity element | 6.75e-15 | 17 |
thoracic segment organ | 6.75e-15 | 17 |
thoracic cavity | 6.75e-15 | 17 |
thoracic segment of trunk | 6.75e-15 | 17 |
respiratory primordium | 6.75e-15 | 17 |
endoderm of foregut | 6.75e-15 | 17 |
epithelial fold | 5.51e-12 | 20 |
breast | 4.33e-08 | 6 |
chest | 4.33e-08 | 6 |