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FFCP PHASE1:Mm9::chr4:124762380..124762417,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=70088
|EntrezGene=70088
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=Q2VPQ9,B1ASC7
|UniProt=Q2VPQ9,B1ASC7
|association_with_transcript=0bp_to_ENSMUST00000055213,ENSMUST00000106173,ENSMUST00000124154,NM_027310,uc008urs.1,uc008urt.1,uc008uru.1_5end
|association_with_transcript=0bp_to_ENSMUST00000055213,ENSMUST00000106173,ENSMUST00000124154,NM_027310,uc008urs.1,uc008urt.1,uc008uru.1_5end
|cluster_id=chr4:124762380..124762417,+
|description=CAGE_peak_1_at_Meaf6_5end
|description=CAGE_peak_1_at_Meaf6_5end
|id=chr4:124762380..124762417,+
|id=chr4:124762380..124762417,+
|ontology_enrichment_celltype=CL:0000117!2.26e-13!23;CL:0000337!2.26e-13!23;CL:0000540!1.26e-07!33;CL:0000047!1.26e-07!33;CL:0000031!1.26e-07!33;CL:0000404!1.26e-07!33
|ontology_enrichment_celltype=CL:0000117!2.26e-13!23;CL:0000337!2.26e-13!23;CL:0000540!1.26e-07!33;CL:0000047!1.26e-07!33;CL:0000031!1.26e-07!33;CL:0000404!1.26e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.26e-13,23;CL:0000337,2.26e-13,23;CL:0000540,1.26e-07,33;CL:0000047,1.26e-07,33;CL:0000031,1.26e-07,33;CL:0000404,1.26e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!4.11e-26!94;UBERON:0007811!5.80e-25!86;UBERON:0001049!9.54e-25!52;UBERON:0005068!9.54e-25!52;UBERON:0006241!9.54e-25!52;UBERON:0007135!9.54e-25!52;UBERON:0000033!7.39e-24!63;UBERON:0000955!2.24e-23!50;UBERON:0006238!2.24e-23!50;UBERON:0002346!4.92e-23!71;UBERON:0003075!4.92e-23!71;UBERON:0007284!4.92e-23!71;UBERON:0002616!9.46e-23!49;UBERON:0003056!1.53e-22!49;UBERON:0001017!3.98e-21!73;UBERON:0005743!3.98e-21!73;UBERON:0003080!7.18e-20!40;UBERON:0000073!7.69e-20!75;UBERON:0001016!7.69e-20!75;UBERON:0002780!3.04e-19!39;UBERON:0001890!3.04e-19!39;UBERON:0006240!3.04e-19!39;UBERON:0002020!6.56e-19!34;UBERON:0002791!3.29e-16!29;UBERON:0003528!3.29e-16!29;UBERON:0001893!3.29e-16!29;UBERON:0004121!9.17e-16!102;UBERON:0000924!9.17e-16!102;UBERON:0006601!9.17e-16!102;UBERON:0000956!2.12e-11!21;UBERON:0001869!2.12e-11!21;UBERON:0000203!2.12e-11!21;UBERON:0002619!1.82e-09!17;UBERON:0000477!3.88e-08!154;UBERON:0002021!2.24e-07!10;UBERON:0000411!2.24e-07!10;UBERON:0001950!2.24e-07!10;UBERON:0000025!3.60e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.31e-26,64;UBERON:0003075,6.31e-26,64;UBERON:0007284,6.31e-26,64;UBERON:0000073,1.12e-25,54;UBERON:0001049,9.54e-25,52;UBERON:0005068,9.54e-25,52;UBERON:0006241,9.54e-25,52;UBERON:0007135,9.54e-25,52;UBERON:0003056,1.53e-22,49;UBERON:0000955,5.99e-22,47;UBERON:0006238,5.99e-22,47;UBERON:0002616,2.48e-21,46;UBERON:0001017,3.98e-21,73;UBERON:0010371,5.07e-21,73;UBERON:0003080,7.18e-20,40;UBERON:0001016,7.69e-20,75;UBERON:0002780,3.04e-19,39;UBERON:0001890,3.04e-19,39;UBERON:0006240,3.04e-19,39;UBERON:0002020,6.56e-19,34;UBERON:0010314,2.02e-18,92;UBERON:0004121,3.47e-17,95;UBERON:0000924,3.47e-17,95;UBERON:0006601,3.47e-17,95;UBERON:0003528,3.29e-16,29;UBERON:0002791,3.29e-16,29;UBERON:0001893,3.29e-16,29;UBERON:0000956,2.12e-11,21;UBERON:0001869,2.12e-11,21;UBERON:0000203,2.12e-11,21;UBERON:0002619,1.82e-09,17;UBERON:0002021,2.24e-07,10;UBERON:0000411,2.24e-07,10;UBERON:0001950,2.24e-07,10;UBERON:0000025,3.60e-07,114
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10767578,52.456422518727,38.7739173550267,36.7995400985465,34.0645599444037,39.9198465299069,34.5491444931904,28.2696417342752,26.311839578234,27.9602690889117,361.327173696566,47.6957781880292,48.4793377039296,58.3353565032143,48.8224132745824,53.3901356550859,55.8620455953789,44.5298996166309,46.767267613867,129.489088762739,169.649673685883,53.7218905067903,42.1668447803541,50.9446347537543,50.9289626072956,48.5162345258875,42.9151726327532,45.7944662671081,46.9652696415156,47.0503656758368,47.4768405460649,47.2874808291782,47.0721563973004,43.9688116296306,36.8162241871942,23.3532295123668,24.196468917773,25.5684491337006,23.3359616746069,35.7400748959552,31.9060208267009,40.8428122116001,28.7253627965948,22.069172577556,120.292142477435,113.700333417273,114.00620717444,100.362258488714,102.762377965596,111.042902916286,116.778892540102,113.931264415728,111.01989020113,118.049351079415,66.942839191794,73.4205767057897,60.4396964369635,40.8419284674734,59.530138186347,40.9971023843531,40.6711511876956,40.1768361615844,37.5475475222424,38.9153706116248,42.5845223815603,41.3091687635507,31.83811253976,37.0065380900144,35.2079424697909,41.9138448329105,38.0100589099126,39.9322086359869,37.0877310722976,35.0333429919866,46.2873490720311,46.1437096014277,35.2885561122035,36.3366041580821,38.6789553507009,36.4688960013126,42.8051456522288,42.6172932529305,37.6177395353037,46.0136662759345,36.3023155459973,35.4616136552028,36.0123317989327,35.0157261080283,39.7387618621151,64.9507502638659,37.1951257428199,38.2470476205971,28.8845381423953,30.2210244193736,34.7801753430632
|phase1_expression=43.0800398711896,11.1672130444596,8.64498554840118,22.6848158480123,22.0394121176393,24.0067358834002,26.1646157466989,58.492865519034,51.106306141055,62.0270994753283,55.3034037368381,55.2023340247728,43.8273868623887,47.8189601231916,34.6434152288289,36.040597595389,39.1754651751762,36.9090733469138,39.7631857456642,46.2584720459853,79.0902598404949,46.1702923084117,47.5383616232862,25.2788028013583,25.4644301984559,16.6527269593356,11.630573896295,19.8233534071018,25.8431850460668,16.8860186939154,19.2905544270115,38.7368710810375,27.0628506537211,15.8481681015439,37.5507105676657,30.5871747459626,39.4046857586372,14.2300754450549,28.1280724028568,17.7998072951091,16.4704816648684,18.442228093878,22.3334762394331,21.2765622378726,18.0450937570736,13.9495531642878,39.90195856175,43.1689809633284,44.3766089123633,41.2191386037481,35.2765782495914,38.8131923785423,40.6033906659722,41.3456420946466,41.3395372945231,17.4936416504444,27.2206767941819,25.2679325215947,118.557446063724,138.595636569273,121.695629473186,29.8183188220836,26.6788438833342,29.2467408116455,22.7439263390404,31.2611250576284,30.8588113833957,38.806048837477,77.4561403944328,83.2986639506531,89.3881085743374,87.6948522119677,88.3474163806454,100.197473757832,99.0083715618382,88.245003514562,69.3730050296149,81.8475837126053,76.8032666281217,159.318635578074,160.011888660614,152.106704202574,78.7296057183894,97.3579315354806,82.052659056147,87.5046898856793,87.4162120106492,115.194857520036,25.6711795399494,35.2163470097621,25.5080750057476,30.1148356943485,21.759082678648,24.2866436237018,22.0923981932207,27.7776670000348,34.549327352411,25.0532574189745,30.9145345477414,24.0270910667031,40.985435155014,23.0987659345772,45.8649431471962,7.11066703153331,18.4017384859532,20.2687892380079,19.2099289105618,33.9126122765608,72.5026074212081,34.5870184021042,34.8705506799933,41.1028395721391,35.284171080177,40.6951129492081,42.0967571545823,32.0449807890672,24.9666917411718,37.4512334422571,38.0382537338446,30.5739346400603,31.3594956213759,33.9412677194656,29.8226817948995,70.8529528767944,62.8340120440365,24.5238773000248,36.6634280988116,50.3918294034462,37.7398574407002,107.549679092663,119.407657335662,114.094151718481,106.032835317289,101.774752017472,105.764114680816,96.0468277361125,47.7626616457983,37.1976842124178,33.3594041132451,40.8257200419759,67.0120281257924,60.9240576748703,68.063485066422,60.7340415877932,67.9684626521765,65.4661110655582,55.0029123165608,58.7256651577566,74.8020935476963,66.943552379408,47.5068035242662,46.4694952746459,48.1021741160284,30.6461906539507,37.2465666898378,48.7633953705308,53.3682022358058,42.7197525810427,39.2145629165918,47.4318019106299,53.9409937956521,41.5943361974944,44.2712655544343,45.4525375336503,39.3381137862815,40.6934403313214,34.3389953791513,35.846960106721,51.0135534731789,45.3102200858303,39.7237166774693,37.1347968060344,41.2754216747175,32.0753340837289,88.1114884483693,107.329510711594,26.7639214216876,16.3959351331397,61.6403044046826,46.9118077158086,42.9128646202571,38.1181861538117,26.0182311298498,30.8165514302346,27.0481565080372,30.304607669218,31.1655658912334,36.2100779114894,38.0179969882284,35.0539569375146,29.3947747829584,25.2909417033046,79.2811825983881,45.8136535565013,48.4643263394246,41.7485222082894,41.6997847410395,38.2240218402236,35.0330415668385,35.5740456630841,34.2257226694197,31.5896739639809,28.1629995732791,41.8781215347396,43.0464199297915,36.4276622063463,41.5863248846431,34.0059795250908,30.5551022137704,23.5910832709665,29.5086112730564,31.0254396902532,20.1275489138296,32.7484033948283,22.4667124642484,35.8662006684899,25.1156378930677,38.5954817090694,36.2116252726545,55.7104750605225,52.1487924614483,39.8900951571692,44.1217666782384,41.2065393306867,36.6587206964461,36.0997248536928,55.0146652930607,37.8704619299405,38.1096897091394,36.869245811041,36.6092161555699,28.3512154819763,31.6661696272472,29.914812610029,22.1293922858566,22.6268131969881,91.6743868830292,86.8538597648226,45.9017847054691,20.4501451035542,31.5508219416257,31.2350995437311,43.0846795465598,29.3931621481639,32.9742037641943,33.6861071638711,34.0040989406911,33.6094236598009,33.5994611254545,104.750749153509,45.420827266646,53.4196811001766,42.8392703099905,40.7476203742163,25.2215762845929,47.0994434140664,37.7904446205939,30.9312330799673,35.4362271456927,25.2096821314021,34.8878195777099,35.262771759318,32.4412614330096,27.8112346983518,22.1379078007497,19.5957532171555,52.7681388918371,64.4618716632091,72.699580285908,55.9419661432456,57.1035552328121,41.5599345012824,55.6175689635169,64.2421042631805,31.2113371724735,18.6412222360162,26.6839361646504,30.3390705412323,43.7568596345904,35.1021223081867,34.8567244489158,32.171616350032,35.8521429054716,86.0373401328765,48.5273301465902,38.5943443091226,40.9279905487063,50.8594833912666,58.3684352368777,45.7556346413045,43.8544349384147,45.3442705528652,42.1509920103493,27.6854479224383,60.736510767578,52.456422518727,38.7739173550267,36.7995400985465,34.0645599444037,39.9198465299069,34.5491444931904,28.2696417342752,26.311839578234,27.9602690889117,361.327173696566,47.6957781880292,48.4793377039296,58.3353565032143,48.8224132745824,53.3901356550859,55.8620455953789,44.5298996166309,46.767267613867,129.489088762739,169.649673685883,53.7218905067903,42.1668447803541,50.9446347537543,50.9289626072956,48.5162345258875,42.9151726327532,45.7944662671081,46.9652696415156,47.0503656758368,47.4768405460649,47.2874808291782,47.0721563973004,43.9688116296306,36.8162241871942,23.3532295123668,24.196468917773,25.5684491337006,23.3359616746069,35.7400748959552,31.9060208267009,40.8428122116001,28.7253627965948,22.069172577556,120.292142477435,113.700333417273,114.00620717444,100.362258488714,102.762377965596,111.042902916286,116.778892540102,113.931264415728,111.01989020113,118.049351079415,66.942839191794,73.4205767057897,60.4396964369635,40.8419284674734,59.530138186347,40.9971023843531,40.6711511876956,40.1768361615844,37.5475475222424,38.9153706116248,42.5845223815603,41.3091687635507,31.83811253976,37.0065380900144,35.2079424697909,41.9138448329105,38.0100589099126,39.9322086359869,37.0877310722976,35.0333429919866,46.2873490720311,46.1437096014277,35.2885561122035,36.3366041580821,38.6789553507009,36.4688960013126,42.8051456522288,42.6172932529305,37.6177395353037,46.0136662759345,36.3023155459973,35.4616136552028,36.0123317989327,35.0157261080283,39.7387618621151,64.9507502638659,37.1951257428199,38.2470476205971,28.8845381423953,30.2210244193736,34.7801753430632
|short_description=p1@Meaf6
|short_description=p1@Meaf6
}}
}}

Latest revision as of 08:03, 26 September 2015

Short description:p1@Meaf6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Meaf6_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 0bp_to_ENSMUST00000055213, ENSMUST00000106173, ENSMUST00000124154, NM_027310, uc008urs.1, uc008urt.1, uc008uru.1_5end
EntrezGene:Meaf6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Meaf6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G743.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I511.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I322.68
CD326+ enterocyte, pool2.CNhs13197.11849-124I422.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I724.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I826.16
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E958.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E751.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F262.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E655.30
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F155.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E443.83
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E847.82
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A134.64
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A336.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A539.18
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A236.91
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A439.76
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A646.26
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A379.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H246.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I947.54
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D125.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D225.46
GP2+ M cell, pool1.CNhs13228.11845-124H916.65
GP2+ M cell, pool2.CNhs13231.11846-124I111.63
GP2+ M cell, pool3.CNhs13240.11847-124I219.82
Ileum epithelium, pool1.CNhs13199.10252-104B925.84
Ileum epithelium, pool2.CNhs13232.10253-104C116.89
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C819.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I338.74
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G627.06
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F537.55
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F630.59
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F739.40
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G814.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H128.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H317.80
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G916.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H218.44
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H422.33
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D821.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D918.05
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.95
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B739.90
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C243.17
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B844.38
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C341.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C435.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C438.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A240.60
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I941.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A141.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C117.49
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E127.22
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C525.27
Mouse Granule cells, donor1.CNhs12131.11713-123C3118.56
Mouse Granule cells, donor2.CNhs12357.11731-123E3138.60
Mouse Granule cells, donor3.CNhs12108.11636-122C7121.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C629.82
Mouse Meningeal cells, donor3.CNhs12109.11639-122D126.68
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C729.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E722.74
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D231.26
Mouse Microglia, donor1.CNhs12629.11718-123C830.86
Mouse Microglia, donor2.CNhs12634.11736-123E838.81
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D577.46
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F583.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D989.39
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F187.69
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D588.35
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2100.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F299.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D688.25
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D369.37
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F381.85
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D776.80
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4159.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4160.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8152.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E478.73
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E597.36
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I682.05
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D687.50
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F687.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1115.19
Mouse Schwann, donor1.CNhs12507.11728-123D925.67
Mouse Schwann, donor2.CNhs12573.11746-123F935.22
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G325.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F730.11
Mouse hepatocyte, donor1.CNhs13078.11714-123C421.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C824.29
Mouse hepatocyte, donor6.CNhs13090.11822-124F422.09
Mouse hepatocyte, donor8.CNhs13091.11824-124F627.78
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A734.55
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I725.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E330.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I824.03
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G640.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H123.10
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I845.86
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G118.40
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G220.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G319.21
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B633.91
accessory axillary lymph node, adult.CNhs10475.1063-29H972.50
adrenal gland, adult.CNhs10508.49-24D734.59
adrenal gland, embryo E14.CNhs11038.406-44C534.87
adrenal gland, embryo E16.CNhs11004.1254-43D641.10
adrenal gland, embryo E17.CNhs11043.1263-45I135.28
adrenal gland, embryo E18.CNhs11026.1262-18F540.70
adrenal gland, neonate N00.CNhs11191.1311-23C142.10
adrenal gland, neonate N25.CNhs11223.1377-27I332.04
amnion, adult pregnant day17.5.CNhs10488.583-22A824.97
aorta, adult.CNhs10498.46-23H137.45
bone (os femoris), adult.CNhs10483.56-12G238.04
bone (os femoris), neonate N02.CNhs11227.1985-43F530.57
bone (os femoris), neonate N16.CNhs11225.1525-43A631.36
bone (os femoris), neonate N20.CNhs11195.1350-25C333.94
cecum, adult.CNhs10467.37-13H429.82
cerebellum, adult.CNhs10494.15-8B270.85
cerebellum, neonate N30.CNhs11135.1395-42I262.83
colon, adult.CNhs10468.36-18H724.52
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C736.66
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D150.39
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D437.74
corpora quadrigemina, adult.CNhs10501.16-22A4107.55
corpus striatum, adult.CNhs10487.19-21D8119.41
corpus striatum, neonate N00.CNhs11226.630-43F1114.09
cortex, adult.CNhs10473.12-14D5106.03
cortex, neonate N30.CNhs11107.1392-42F2101.77
diencephalon, adult.CNhs10482.20-12F2105.76
diencephalon, neonate N30.CNhs11201.1388-42B296.05
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B147.76
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A237.20
epididymis, adult.CNhs10490.58-23B233.36
eyeball, adult.CNhs10484.31-12G440.83
eyeball, embryo E12.CNhs11016.345-16C667.01
eyeball, embryo E14.CNhs10521.399-16E260.92
eyeball, embryo E15.CNhs10593.426-16C968.06
eyeball, embryo E17.CNhs11023.1261-18D460.73
eyeball, neonate N00.CNhs11207.633-15C667.97
eyeball, neonate N01.CNhs11140.1532-43E765.47
eyeball, neonate N02.CNhs11205.1551-44G855.00
eyeball, neonate N16.CNhs11188.777-19A258.73
forelimb, embryo E11.CNhs10596.335-25E274.80
forelimb, embryo E12.CNhs10600.359-14H266.94
forelimb, embryo E13.CNhs10589.384-1E247.51
forelimb, embryo E14.CNhs10577.413-26A846.47
forelimb, embryo E15.CNhs11007.437-20E748.10
forelimb, embryo E17.CNhs10598.1517-43C430.65
forelimb, embryo E18.CNhs11008.1520-43B537.25
gonad, embryo E13.CNhs11044.1564-45I648.76
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C853.37
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D242.72
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D539.21
heart, embryo E11.CNhs10586.331-24E947.43
heart, embryo E12.CNhs11015.353-12F553.94
heart, embryo E13.CNhs11013.376-3I941.59
heart, embryo E14.CNhs10597.403-26D444.27
heart, embryo E15.CNhs11017.431-16C845.45
heart, embryo E16.CNhs11021.457-17C639.34
heart, embryo E17.CNhs11025.479-18E540.69
heart, embryo E18.CNhs11030.1283-20G334.34
heart, neonate N00.CNhs11213.639-21E335.85
heart, neonate N03.CNhs11221.1349-25I251.01
heart, neonate N10.CNhs11118.749-24G145.31
heart, neonate N16.CNhs11209.782-15G139.72
heart, neonate N20.CNhs11127.821-26I637.13
heart, neonate N25.CNhs11196.1351-25D341.28
heart, neonate N30.CNhs11202.1390-42D232.08
hippocampus, adult.CNhs10478.13-16E888.11
hippocampus, neonate N00.CNhs11228.627-43G1107.33
intestinal mucosa, adult.CNhs10506.860-29I326.76
intestine, adult.CNhs10496.178-9A316.40
intestine, embryo E12.CNhs11019.1251-16I561.64
intestine, embryo E13.CNhs11010.381-16D546.91
intestine, embryo E15.CNhs10602.976-16D842.91
intestine, embryo E16.CNhs10585.463-22H438.12
intestine, embryo E17.CNhs10582.482-18D326.02
intestine, embryo E18.CNhs10526.1289-20F730.82
intestine, neonate N00.CNhs11126.644-26D127.05
intestine, neonate N01.CNhs11192.1322-23E930.30
intestine, neonate N06.CNhs11102.688-20B831.17
intestine, neonate N07.CNhs11095.720-20F236.21
intestine, neonate N10.CNhs11098.755-23A538.02
intestine, neonate N20.CNhs11187.827-18D135.05
intestine, neonate N25.CNhs11121.1352-25E329.39
intestine, neonate N30.CNhs11131.1384-42G125.29
kidney, embryo E14.CNhs10606.411-4I979.28
kidney, embryo E15.CNhs10997.434-16F845.81
kidney, embryo E16.CNhs10584.464-22A548.46
kidney, embryo E17.CNhs11028.483-18I241.75
kidney, embryo E18.CNhs11001.1288-20C741.70
kidney, neonate N00.CNhs11214.646-21G738.22
kidney, neonate N10.CNhs11206.758-6D535.03
kidney, neonate N20.CNhs11113.832-19I135.57
kidney, neonate N25.CNhs11122.1353-25F334.23
kidney, neonate N30.CNhs11203.1385-42H131.59
liver, adult pregnant day01.CNhs10466.508-5B228.16
liver, embryo E12.CNhs10601.355-15F841.88
liver, embryo E13.CNhs10524.378-3H643.05
liver, embryo E14.CNhs10594.409-16E136.43
liver, embryo E15.CNhs10520.433-16D741.59
liver, embryo E16.CNhs10523.462-17F534.01
liver, embryo E17.CNhs10510.481-18A330.56
liver, embryo E18.CNhs10579.499-43G423.59
liver, neonate N00.CNhs11117.641-24F429.51
liver, neonate N03.CNhs11123.1345-25G231.03
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H232.75
liver, neonate N10.CNhs11115.751-24B922.47
liver, neonate N20.CNhs11220.823-25A335.87
liver, neonate N25.CNhs11198.1368-26H125.12
liver, neonate N30.CNhs11106.1382-42D138.60
lung, adult.CNhs10474.28-22B136.21
lung, embryo E12.CNhs10522.354-16G255.71
lung, embryo E14.CNhs10604.404-26F852.15
lung, embryo E15.CNhs11020.432-17C539.89
lung, embryo E16.CNhs10998.458-17B644.12
lung, embryo E17.CNhs10605.480-44A641.21
lung, embryo E18.CNhs10583.1287-20I636.66
lung, neonate N00.CNhs11224.640-42C636.10
lung, neonate N06.CNhs11212.683-20E555.01
lung, neonate N07.CNhs11111.715-19A337.87
lung, neonate N10.CNhs11219.750-23E638.11
lung, neonate N20.CNhs11109.822-18A436.87
lung, neonate N25.CNhs11119.1359-25C736.61
lung, neonate N30.CNhs11133.1394-42H228.35
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A131.67
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A129.91
mammary gland, adult lactating day02.CNhs10480.595-22B622.13
mammary gland, adult pregnant day19.CNhs10476.588-5H222.63
medulla oblongata, adult.CNhs10477.17-12C291.67
medulla oblongata, neonate N30.CNhs11200.1396-42A386.85
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C745.90
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C220.45
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E131.55
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E231.24
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E343.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D729.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D832.97
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D933.69
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D434.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D533.61
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D633.60
olfactory brain, adult.CNhs10489.18-22I9104.75
ovary, adult.CNhs10507.91-2I745.42
ovary, embryo E18.CNhs11040.505-44H753.42
ovary, neonate N00.CNhs11217.1299-22I442.84
oviduct, adult pregnant day01.CNhs10500.988-6G640.75
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F447.10
pancreas, embryo E15.CNhs11042.1556-45F237.79
pancreas, embryo E16.CNhs11003.460-26E530.93
pancreas, embryo E17.CNhs10599.1558-45G335.44
pancreas, embryo E18.CNhs10580.1535-43I725.21
pancreas, neonate N00.CNhs11105.645-26G934.89
pancreas, neonate N01.CNhs11138.1531-43D735.26
pancreas, neonate N02.CNhs11139.1539-43D832.44
pancreas, neonate N16.CNhs11136.787-43B627.81
pancreas, neonate N25.CNhs11094.1555-45E222.14
pancreas, neonate N30.CNhs11182.1548-44H519.60
pituitary gland, adult.CNhs10493.21-1G852.77
pituitary gland, embryo E12.CNhs11018.346-16E664.46
pituitary gland, embryo E13.CNhs11009.370-44C772.70
pituitary gland, embryo E14.CNhs11037.398-44A555.94
pituitary gland, embryo E15.CNhs10592.427-16B957.10
pituitary gland, embryo E16.CNhs11036.449-43F641.56
pituitary gland, embryo E17.CNhs11039.1265-44F555.62
pituitary gland, neonate N00.CNhs11190.1308-22E964.24
placenta, adult pregnant day10.CNhs10472.539-13I731.21
placenta, adult pregnant day17.CNhs10464.577-18G318.64
prostate, adult.CNhs10470.859-1F826.68
skin, adult.CNhs10492.30-1C330.34
skin, neonate N00.CNhs11124.650-25G443.76
skin, neonate N03.CNhs11215.662-22H335.10
skin, neonate N06.CNhs11097.693-20I534.86
skin, neonate N10.CNhs11108.762-6C432.17
small intestine, neonate N16.CNhs11114.790-21I135.85
spinal cord, adult.CNhs10505.24-13C986.04
spleen, adult.CNhs10465.25-2G248.53
spleen, embryo E16.CNhs11035.461-43C138.59
spleen, embryo E18.CNhs11011.1271-21F240.93
spleen, neonate N10.CNhs11116.752-24D150.86
spleen, neonate N20.CNhs11112.824-19H158.37
spleen, neonate N25.CNhs11099.1354-25G345.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C643.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C945.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D342.15
stomach, adult.CNhs10503.33-1H627.69
stomach, embryo E12.CNhs10588.356-43E360.74
stomach, embryo E15.CNhs10603.1252-16G852.46
stomach, embryo E16.CNhs11022.459-17D438.77
stomach, embryo E17.CNhs11006.1035-18D536.80
stomach, embryo E18.CNhs10999.1286-20C634.06
stomach, neonate N03.CNhs11193.1340-24B839.92
stomach, neonate N07.CNhs11210.718-18A934.55
stomach, neonate N25.CNhs11104.1355-25E428.27
stomach, neonate N30.CNhs11134.1386-42I126.31
submandibular gland, adult.CNhs10469.59-29C127.96
testis, adult.CNhs10504.57-7G5361.33
testis, embryo E13.CNhs11031.389-23F547.70
testis, embryo E15.CNhs11034.443-27C548.48
testis, embryo E16.CNhs11033.470-26G558.34
testis, embryo E17.CNhs11029.486-18I548.82
testis, embryo E18.CNhs11027.503-18G553.39
testis, neonate N00.CNhs11189.1300-22B755.86
testis, neonate N07.CNhs11222.726-26I444.53
testis, neonate N10.CNhs11204.763-44D946.77
testis, neonate N20.CNhs11110.839-18H3129.49
testis, neonate N30.CNhs11130.1391-42E2169.65
thymus, adult.CNhs10471.38-12B553.72
thymus, embryo E14.CNhs11041.402-44I442.17
thymus, embryo E15.CNhs11005.430-45I250.94
thymus, embryo E16.CNhs11002.456-26C550.93
thymus, embryo E17.CNhs10581.478-18C148.52
thymus, embryo E18.CNhs10595.1273-19G442.92
thymus, neonate N02.CNhs11181.1541-43F845.79
thymus, neonate N03.CNhs11137.2104-43C746.97
thymus, neonate N06.CNhs11197.681-26C447.05
thymus, neonate N07.CNhs11211.713-19D347.48
thymus, neonate N10.CNhs11194.748-24E447.29
thymus, neonate N20.CNhs11186.820-7A247.07
thymus, neonate N25.CNhs11125.1362-25G743.97
thymus, neonate N30.CNhs11132.1393-42G236.82
tongue, adult.CNhs10499.32-1B423.35
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H324.20
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F725.57
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G523.34
urinary bladder, adult.CNhs10481.879-12E435.74
uterus, adult pregnant day19.CNhs10497.590-15F531.91
uterus, adult.CNhs10509.92-27E540.84
vagina, adult.CNhs10502.89-27D528.73
vesicular gland, adult.CNhs10491.51-27F822.07
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1120.29
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2113.70
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3114.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7100.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4102.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5111.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6116.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7113.93
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8111.02
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9118.05
whole body, embryo E11.CNhs11014.324-5I866.94
whole body, embryo E12.CNhs10587.857-27C973.42
whole body, embryo E13.CNhs10512.372-23H260.44
whole body, embryo E14.5.CNhs10578.420-27D240.84
whole body, embryo E14.CNhs10519.395-14B159.53
whole body, embryo E16.CNhs10514.453-14F241.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G540.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G540.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G537.55
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G538.92
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G542.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G541.31
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G531.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G537.01
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G535.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G541.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G538.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G539.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G537.09
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G535.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G546.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G546.14
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G535.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G536.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G538.68
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G536.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G542.81
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G542.62
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G537.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G546.01
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G536.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G535.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G536.01
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G535.02
whole body, embryo E17.5.CNhs10513.490-9F939.74
whole body, embryo E17.CNhs10517.475-3I564.95
whole body, embryo E18.CNhs10516.493-3B337.20
whole body, neonate N00.CNhs10525.657-19C238.25
whole body, neonate N01.CNhs10576.659-23C628.88
whole body, neonate N06.CNhs10515.692-21D130.22
whole body, neonate N10.CNhs10518.761-6B434.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.26e-1323
neuroblast (sensu Vertebrata)2.26e-1323
neuron1.26e-0733
neuronal stem cell1.26e-0733
neuroblast1.26e-0733
electrically signaling cell1.26e-0733

Uber anatomy
Ontology termp-valuen
neurectoderm6.31e-2664
neural plate6.31e-2664
presumptive neural plate6.31e-2664
regional part of nervous system1.12e-2554
neural tube9.54e-2552
neural rod9.54e-2552
future spinal cord9.54e-2552
neural keel9.54e-2552
pre-chordal neural plate1.53e-2249
brain5.99e-2247
future brain5.99e-2247
regional part of brain2.48e-2146
central nervous system3.98e-2173
ecto-epithelium5.07e-2173
anterior neural tube7.18e-2040
nervous system7.69e-2075
regional part of forebrain3.04e-1939
forebrain3.04e-1939
future forebrain3.04e-1939
gray matter6.56e-1934
structure with developmental contribution from neural crest2.02e-1892
ectoderm-derived structure3.47e-1795
ectoderm3.47e-1795
presumptive ectoderm3.47e-1795
brain grey matter3.29e-1629
regional part of telencephalon3.29e-1629
telencephalon3.29e-1629
cerebral cortex2.12e-1121
cerebral hemisphere2.12e-1121
pallium2.12e-1121
regional part of cerebral cortex1.82e-0917
occipital lobe2.24e-0710
visual cortex2.24e-0710
neocortex2.24e-0710
tube3.60e-07114
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