FFCP PHASE1:Mm9::chr1:132612582..132612609,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18640 | |EntrezGene=18640 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q6GTL7,P70265 | |UniProt=Q6GTL7,P70265 | ||
|association_with_transcript=-184bp_to_ENSMUST00000050406,NM_008825,NR_027859,uc007cmd.2,uc007cme.2,uc007cmg.2_5end | |association_with_transcript=-184bp_to_ENSMUST00000050406,NM_008825,NR_027859,uc007cmd.2,uc007cme.2,uc007cmg.2_5end | ||
|cluster_id=chr1:132612582..132612609,- | |||
|description=CAGE_peak_3_at_Pfkfb2_5end | |description=CAGE_peak_3_at_Pfkfb2_5end | ||
|id=chr1:132612582..132612609,- | |id=chr1:132612582..132612609,- | ||
|ontology_enrichment_celltype=CL:0000055!4.54e-10!50;CL:0000393!5.67e-10!39;CL:0000211!5.67e-10!39;CL:0002319!2.87e-09!43;CL:0000221!4.24e-09!44;CL:0000133!4.24e-09!44;CL:0000540!8.36e-09!33;CL:0000047!8.36e-09!33;CL:0000031!8.36e-09!33;CL:0000404!8.36e-09!33;CL:0000117!2.58e-07!23;CL:0000337!2.58e-07!23 | |ontology_enrichment_celltype=CL:0000055!4.54e-10!50;CL:0000393!5.67e-10!39;CL:0000211!5.67e-10!39;CL:0002319!2.87e-09!43;CL:0000221!4.24e-09!44;CL:0000133!4.24e-09!44;CL:0000540!8.36e-09!33;CL:0000047!8.36e-09!33;CL:0000031!8.36e-09!33;CL:0000404!8.36e-09!33;CL:0000117!2.58e-07!23;CL:0000337!2.58e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,3.16e-10,39;CL:0000211,3.16e-10,39;CL:0002319,1.84e-09,43;CL:0000221,2.74e-09,44;CL:0000133,2.74e-09,44;CL:0000540,5.49e-09,33;CL:0000047,5.49e-09,33;CL:0000031,5.49e-09,33;CL:0000404,5.49e-09,33;CL:0000117,2.15e-07,23;CL:0000337,2.15e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.36e-18!102;UBERON:0000924!1.36e-18!102;UBERON:0006601!1.36e-18!102;UBERON:0000073!2.61e-18!75;UBERON:0001016!2.61e-18!75;UBERON:0001017!4.93e-18!73;UBERON:0005743!4.93e-18!73;UBERON:0002020!7.57e-14!34;UBERON:0001049!9.42e-14!52;UBERON:0005068!9.42e-14!52;UBERON:0006241!9.42e-14!52;UBERON:0007135!9.42e-14!52;UBERON:0000033!1.62e-13!63;UBERON:0002346!3.21e-13!71;UBERON:0003075!3.21e-13!71;UBERON:0007284!3.21e-13!71;UBERON:0000955!8.83e-13!50;UBERON:0006238!8.83e-13!50;UBERON:0002616!3.64e-12!49;UBERON:0002791!3.75e-12!29;UBERON:0003528!3.75e-12!29;UBERON:0001893!3.75e-12!29;UBERON:0003056!6.35e-11!49;UBERON:0003080!4.36e-10!40;UBERON:0004111!4.58e-10!122;UBERON:0000025!6.57e-10!114;UBERON:0002780!1.39e-09!39;UBERON:0001890!1.39e-09!39;UBERON:0006240!1.39e-09!39;UBERON:0000956!1.43e-09!21;UBERON:0001869!1.43e-09!21;UBERON:0000203!1.43e-09!21;UBERON:0002619!2.10e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.38e-19,95;UBERON:0000924,9.38e-19,95;UBERON:0006601,9.38e-19,95;UBERON:0001016,1.48e-18,75;UBERON:0001017,2.91e-18,73;UBERON:0000073,5.92e-14,54;UBERON:0002020,5.92e-14,34;UBERON:0001049,8.92e-14,52;UBERON:0005068,8.92e-14,52;UBERON:0006241,8.92e-14,52;UBERON:0007135,8.92e-14,52;UBERON:0010371,9.97e-14,73;UBERON:0002346,1.13e-13,64;UBERON:0003075,1.13e-13,64;UBERON:0007284,1.13e-13,64;UBERON:0003528,3.70e-12,29;UBERON:0002791,3.70e-12,29;UBERON:0001893,3.70e-12,29;UBERON:0000955,4.62e-12,47;UBERON:0006238,4.62e-12,47;UBERON:0002616,1.99e-11,46;UBERON:0010314,3.11e-11,92;UBERON:0003056,3.01e-10,49;UBERON:0003080,6.20e-10,40;UBERON:0000956,2.05e-09,21;UBERON:0001869,2.05e-09,21;UBERON:0000203,2.05e-09,21;UBERON:0002780,2.06e-09,39;UBERON:0001890,2.06e-09,39;UBERON:0006240,2.06e-09,39;UBERON:0004111,1.09e-08,122;UBERON:0000025,1.59e-08,114;UBERON:0002619,3.75e-07,17 | |||
|phase1_expression=2.08193501236232,0.697950815278722,2.27499619694768,1.20985684522732,1.50268718983904,1.00727563147134,0,0.258246646883153,0.703943610758334,0.936258105287974,0.171217968225505,0.319088635981346,0.342401459862411,0.262261207256992,1.33243904726265,0.202475267389826,0.699561878128147,0.630924330716475,0.548457734422955,1.27316895539409,2.8064285749853,0.595745707205312,0.261199789138935,0.319984845586813,0,1.14846392823004,1.29228598847722,0.646413698057667,0.380046838912748,0.252030129759931,0,1.27006134691926,0.61506478758457,0,0,0.332469290716985,0.408338712524738,0.837063261473815,0,0,0.588231488031014,0,0,3.9028013572429,4.05507724878058,3.85448179539531,1.56478268869608,1.52617609466313,1.31811709640683,2.52758868796568,1.67983705950435,4.31257693094915,0.335565212115473,0,0.336093799142464,1.02903774414379,2.29226751951005,1.54701627683233,2.42779753031517,2.64495489636016,1.90149421051854,0.677689064138264,0.889294796111139,0.449949858640699,1.97773272513395,0,0.599200221036809,2.68952813725088,4.14758449233911,4.45519596494579,5.25812403378455,3.14216082844184,2.20868540951614,2.9397791811589,2.49198224647415,0.919218786610021,2.20231761998777,2.42605942361857,2.30409799884365,4.48413378282659,3.56801810049398,6.77187381723788,1.95428099300967,1.12552522006336,2.90316670775939,5.00868595305235,2.42031857358475,2.60959224155421,1.81742863999642,2.04043212288321,4.05810284182349,0.860423876981386,2.03991400112325,1.07940638327563,2.59910566979068,0.448026887097336,1.26399978118577,2.04516387093669,0.519572009205738,1.7666978725517,1.26759077799012,5.13305909657271,0,0,0.865964164044856,0.253359865475099,0,1.02765491747154,2.33044095282455,6.67989625791711,1.04091196059682,0.608930956624282,0.461230994512117,1.50722640552623,2.70454026412121,0.879666139307728,1.23597483867187,2.4581890676385,0.884610551949874,1.7794353494215,0.220841518460394,3.39412677194655,0,2.92780797011547,2.30391377494801,1.78819938646014,1.67741174308288,1.79970819298022,0.889491589511453,4.6435098215495,6.8625090422794,2.89005009859588,4.86708096538374,4.60287823194595,3.53239675751252,2.92034273521964,2.64782346010822,0.995255764880744,0.758168275301024,5.26104639716185,0.780722657776222,0.919608417733892,0.900310649026746,1.80845781402858,2.65342346690179,2.8185018462667,2.62364828767241,7.50239775143145,0.215567992932842,1.32374256117473,1.23165786914764,0.657587197282725,1.66828349535359,1.39300866608867,2.46938563689532,0.59710280045548,2.80885274925294,0.257347907114715,0.568326998791185,0.621377317606506,0.703578179943289,0.900310307305074,0.710234206755631,0.787056926989615,0.925602677324269,1.16266972375204,1.07309360559848,1.75148013550754,1.31647879930784,2.29834449710733,2.35099547682982,2.92399974850665,2.41505126820156,2.81833479396781,9.2527577368216,6.48299057989492,0,1.58670339998127,0.853153002140936,1.39342003116263,0.515469845288373,1.00841762311671,1.33426826306922,0.570676878337677,0.474529061544512,0.988193728344065,0.251335208800269,0.795825888164603,0.38992817423824,0,1.29682829924817,1.1948476395262,0.569003702859245,1.71372768914593,0,1.01825663922657,1.93952487167626,1.40271639780637,1.70738650235495,0.738050739898011,0.784993639206874,0.987177311374404,0.296452627087149,0.83422552858047,0.393117990226406,0.224862112384854,0.608580364165509,0.72353147925725,0.763877555344259,0,1.45921704097532,0.274561413188081,7.18841032636773,0.372140947668503,0.936113019343682,0.505157755894224,0.896987067609561,0.964887042726734,2.95605104266567,0.757965647081939,0.814824882210129,0.848725428875941,0.469380496577004,2.51259386162724,3.33261097240419,2.92700471786698,3.15270288212382,2.6575762757853,1.75400245523236,4.7520361267564,2.93564469172023,2.16973587872267,4.52373851817817,2.17562273527484,0.983528546038072,1.10374698521893,4.0137647496948,3.16471553798949,1.47541450839008,2.52470927204373,1.26203287766503,1.17131623288992,1.50796378412959,2.86762557543062,3.34198011123591,3.39691836946599,2.02405350837447,3.50707029493574,2.37172666767914,8.67567554338879,2.98074178937364,0.890328018336276,0.977321756121456,3.95928295134085,1.32745138339963,1.45668381692989,0.906970670894253,0.754420319023592,0.590603785761546,0.922305443831782,0.516856586336442,1.09060118843252,0.356497378384721,0.316036757935816,0,0,0.680879211507576,1.08036656418786,0.258717367565509,1.07168517515796,1.41872186913819,1.42695054081656,1.31639216481697,0.913394847343798,3.98941903708308,1.27099242518292,2.20528398054962,2.63818004706368,3.06782410722221,1.44751019827574,1.3130957840345,2.29797259643086,1.7488850197791,4.45020724825223,0.512612642393558,1.44470807574256,1.11116716421827,1.13021074202815,0.546776910884101,1.83022538565218,1.18984900995699,0.559805809294632,1.38199973804424,0.954670618015114,0.158167996790568,2.23651413839534,1.72808545314882,1.04544148007234,1.09181281873089,1.34864346384821,1.81837602595739,1.04702376793612,0.777689839750757,0.621339313086926,2.81846469342095,1.34564891439581,0.9927509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| |phase1_expression=2.08193501236232,0.697950815278722,2.27499619694768,1.20985684522732,1.50268718983904,1.00727563147134,0,0.258246646883153,0.703943610758334,0.936258105287974,0.171217968225505,0.319088635981346,0.342401459862411,0.262261207256992,1.33243904726265,0.202475267389826,0.699561878128147,0.630924330716475,0.548457734422955,1.27316895539409,2.8064285749853,0.595745707205312,0.261199789138935,0.319984845586813,0,1.14846392823004,1.29228598847722,0.646413698057667,0.380046838912748,0.252030129759931,0,1.27006134691926,0.61506478758457,0,0,0.332469290716985,0.408338712524738,0.837063261473815,0,0,0.588231488031014,0,0,3.9028013572429,4.05507724878058,3.85448179539531,1.56478268869608,1.52617609466313,1.31811709640683,2.52758868796568,1.67983705950435,4.31257693094915,0.335565212115473,0,0.336093799142464,1.02903774414379,2.29226751951005,1.54701627683233,2.42779753031517,2.64495489636016,1.90149421051854,0.677689064138264,0.889294796111139,0.449949858640699,1.97773272513395,0,0.599200221036809,2.68952813725088,4.14758449233911,4.45519596494579,5.25812403378455,3.14216082844184,2.20868540951614,2.9397791811589,2.49198224647415,0.919218786610021,2.20231761998777,2.42605942361857,2.30409799884365,4.48413378282659,3.56801810049398,6.77187381723788,1.95428099300967,1.12552522006336,2.90316670775939,5.00868595305235,2.42031857358475,2.60959224155421,1.81742863999642,2.04043212288321,4.05810284182349,0.860423876981386,2.03991400112325,1.07940638327563,2.59910566979068,0.448026887097336,1.26399978118577,2.04516387093669,0.519572009205738,1.7666978725517,1.26759077799012,5.13305909657271,0,0,0.865964164044856,0.253359865475099,0,1.02765491747154,2.33044095282455,6.67989625791711,1.04091196059682,0.608930956624282,0.461230994512117,1.50722640552623,2.70454026412121,0.879666139307728,1.23597483867187,2.4581890676385,0.884610551949874,1.7794353494215,0.220841518460394,3.39412677194655,0,2.92780797011547,2.30391377494801,1.78819938646014,1.67741174308288,1.79970819298022,0.889491589511453,4.6435098215495,6.8625090422794,2.89005009859588,4.86708096538374,4.60287823194595,3.53239675751252,2.92034273521964,2.64782346010822,0.995255764880744,0.758168275301024,5.26104639716185,0.780722657776222,0.919608417733892,0.900310649026746,1.80845781402858,2.65342346690179,2.8185018462667,2.62364828767241,7.50239775143145,0.215567992932842,1.32374256117473,1.23165786914764,0.657587197282725,1.66828349535359,1.39300866608867,2.46938563689532,0.59710280045548,2.80885274925294,0.257347907114715,0.568326998791185,0.621377317606506,0.703578179943289,0.900310307305074,0.710234206755631,0.787056926989615,0.925602677324269,1.16266972375204,1.07309360559848,1.75148013550754,1.31647879930784,2.29834449710733,2.35099547682982,2.92399974850665,2.41505126820156,2.81833479396781,9.2527577368216,6.48299057989492,0,1.58670339998127,0.853153002140936,1.39342003116263,0.515469845288373,1.00841762311671,1.33426826306922,0.570676878337677,0.474529061544512,0.988193728344065,0.251335208800269,0.795825888164603,0.38992817423824,0,1.29682829924817,1.1948476395262,0.569003702859245,1.71372768914593,0,1.01825663922657,1.93952487167626,1.40271639780637,1.70738650235495,0.738050739898011,0.784993639206874,0.987177311374404,0.296452627087149,0.83422552858047,0.393117990226406,0.224862112384854,0.608580364165509,0.72353147925725,0.763877555344259,0,1.45921704097532,0.274561413188081,7.18841032636773,0.372140947668503,0.936113019343682,0.505157755894224,0.896987067609561,0.964887042726734,2.95605104266567,0.757965647081939,0.814824882210129,0.848725428875941,0.469380496577004,2.51259386162724,3.33261097240419,2.92700471786698,3.15270288212382,2.6575762757853,1.75400245523236,4.7520361267564,2.93564469172023,2.16973587872267,4.52373851817817,2.17562273527484,0.983528546038072,1.10374698521893,4.0137647496948,3.16471553798949,1.47541450839008,2.52470927204373,1.26203287766503,1.17131623288992,1.50796378412959,2.86762557543062,3.34198011123591,3.39691836946599,2.02405350837447,3.50707029493574,2.37172666767914,8.67567554338879,2.98074178937364,0.890328018336276,0.977321756121456,3.95928295134085,1.32745138339963,1.45668381692989,0.906970670894253,0.754420319023592,0.590603785761546,0.922305443831782,0.516856586336442,1.09060118843252,0.356497378384721,0.316036757935816,0,0,0.680879211507576,1.08036656418786,0.258717367565509,1.07168517515796,1.41872186913819,1.42695054081656,1.31639216481697,0.913394847343798,3.98941903708308,1.27099242518292,2.20528398054962,2.63818004706368,3.06782410722221,1.44751019827574,1.3130957840345,2.29797259643086,1.7488850197791,4.45020724825223,0.512612642393558,1.44470807574256,1.11116716421827,1.13021074202815,0.546776910884101,1.83022538565218,1.18984900995699,0.559805809294632,1.38199973804424,0.954670618015114,0.158167996790568,2.23651413839534,1.72808545314882,1.04544148007234,1.09181281873089,1.34864346384821,1.81837602595739,1.04702376793612,0.777689839750757,0.621339313086926,2.81846469342095,1.34564891439581,0.9927509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| ||
|short_description=p3@Pfkfb2 | |short_description=p3@Pfkfb2 | ||
}} | }} |
Latest revision as of 07:59, 26 September 2015
Short description: | p3@Pfkfb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pfkfb2_5end |
Coexpression cluster: | NA |
Association with transcript: | -184bp_to_ENSMUST00000050406, NM_008825, NR_027859, uc007cmd.2, uc007cme.2, uc007cmg.2_5end |
EntrezGene: | Pfkfb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 3.16e-10 | 39 |
electrically active cell | 3.16e-10 | 39 |
neural cell | 1.84e-09 | 43 |
ectodermal cell | 2.74e-09 | 44 |
neurectodermal cell | 2.74e-09 | 44 |
neuron | 5.49e-09 | 33 |
neuronal stem cell | 5.49e-09 | 33 |
neuroblast | 5.49e-09 | 33 |
electrically signaling cell | 5.49e-09 | 33 |
CNS neuron (sensu Vertebrata) | 2.15e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.15e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 9.38e-19 | 95 |
ectoderm | 9.38e-19 | 95 |
presumptive ectoderm | 9.38e-19 | 95 |
nervous system | 1.48e-18 | 75 |
central nervous system | 2.91e-18 | 73 |
regional part of nervous system | 5.92e-14 | 54 |
gray matter | 5.92e-14 | 34 |
neural tube | 8.92e-14 | 52 |
neural rod | 8.92e-14 | 52 |
future spinal cord | 8.92e-14 | 52 |
neural keel | 8.92e-14 | 52 |
ecto-epithelium | 9.97e-14 | 73 |
neurectoderm | 1.13e-13 | 64 |
neural plate | 1.13e-13 | 64 |
presumptive neural plate | 1.13e-13 | 64 |
brain grey matter | 3.70e-12 | 29 |
regional part of telencephalon | 3.70e-12 | 29 |
telencephalon | 3.70e-12 | 29 |
brain | 4.62e-12 | 47 |
future brain | 4.62e-12 | 47 |
regional part of brain | 1.99e-11 | 46 |
structure with developmental contribution from neural crest | 3.11e-11 | 92 |
pre-chordal neural plate | 3.01e-10 | 49 |
anterior neural tube | 6.20e-10 | 40 |
cerebral cortex | 2.05e-09 | 21 |
cerebral hemisphere | 2.05e-09 | 21 |
pallium | 2.05e-09 | 21 |
regional part of forebrain | 2.06e-09 | 39 |
forebrain | 2.06e-09 | 39 |
future forebrain | 2.06e-09 | 39 |
anatomical conduit | 1.09e-08 | 122 |
tube | 1.59e-08 | 114 |
regional part of cerebral cortex | 3.75e-07 | 17 |