FFCP PHASE1:Mm9::chr1:132612404..132612425,-: Difference between revisions
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{{FFCP|EntrezGene=18640|HGNC=|UniProt=Q6GTL7,P70265|association_with_transcript=-6bp_to_ENSMUST00000050406,NM_008825,NR_027859,uc007cmd.2,uc007cme.2,uc007cmg.2_5end|description=CAGE_peak_2_at_Pfkfb2_5end|id=chr1:132612404..132612425,-|ontology_enrichment_celltype=CL:0000117!4.77e-07!23;CL:0000337!4.77e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.61e-07,23;CL:0000337,4.61e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!8.52e-14!51;UBERON:0001049!4.53e-13!52;UBERON:0005068!4.53e-13!52;UBERON:0006241!4.53e-13!52;UBERON:0007135!4.53e-13!52;UBERON:0000955!9.30e-13!50;UBERON:0006238!9.30e-13!50;UBERON:0002616!2.94e-12!49;UBERON:0000033!2.30e-11!63;UBERON:0003080!3.74e-11!40;UBERON:0002780!1.27e-10!39;UBERON:0001890!1.27e-10!39;UBERON:0006240!1.27e-10!39;UBERON:0004121!1.17e-09!102;UBERON:0000924!1.17e-09!102;UBERON:0006601!1.17e-09!102;UBERON:0001017!1.22e-09!73;UBERON:0005743!1.22e-09!73;UBERON:0002020!1.42e-09!34;UBERON:0003056!3.72e-09!49;UBERON:0000073!9.13e-09!75;UBERON:0001016!9.13e-09!75;UBERON:0002791!9.28e-09!29;UBERON:0003528!9.28e-09!29;UBERON:0001893!9.28e-09!29;UBERON:0002346!3.76e-08!71;UBERON:0003075!3.76e-08!71;UBERON:0007284!3.76e-08!71;UBERON:0000468!1.57e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.91e-14,51;UBERON:0000073,3.78e-13,54;UBERON:0001049,5.07e-13,52;UBERON:0005068,5.07e-13,52;UBERON:0006241,5.07e-13,52;UBERON:0007135,5.07e-13,52;UBERON:0000955,4.74e-12,47;UBERON:0006238,4.74e-12,47;UBERON:0002616,1.48e-11,46;UBERON:0003080,4.56e-11,40;UBERON:0010371,8.17e-11,73;UBERON:0002780,1.55e-10,39;UBERON:0001890,1.55e-10,39;UBERON:0006240,1.55e-10,39;UBERON:0004121,1.59e-10,95;UBERON:0000924,1.59e-10,95;UBERON:0006601,1.59e-10,95;UBERON:0001017,1.08e-09,73;UBERON:0002020,1.75e-09,34;UBERON:0002346,3.10e-09,64;UBERON:0003075,3.10e-09,64;UBERON:0007284,3.10e-09,64;UBERON:0003056,6.19e-09,49;UBERON:0001016,9.40e-09,75;UBERON:0003528,1.15e-08,29;UBERON:0002791,1.15e-08,29;UBERON:0001893,1.15e-08,29|phase1_expression=1.76163731815273,3.14077866875425,3.63999391511629,2.41971369045464,2.50447864973174,2.35030980676646,2.33612640595526,1.54947988129892,0,0.234064526321993,0.34243593645101,0,2.73921167889929,3.2345548895029,1.33243904726265,2.22722794128809,0.699561878128147,2.05050407482854,1.91960207048034,3.81950686618227,3.74190476664707,1.19149141441062,1.04479915655574,2.23989391910769,1.60586496747019,2.29692785646008,2.15380998079537,1.939241094173,2.85035129184561,2.26827116783938,2.43903561720835,1.90509202037889,1.84519436275371,0,3.17736781726402,0.831173226792462,1.42918549383658,3.34825304589526,0.7813353445238,1.0470474879476,0.588231488031014,0,0.485510353031154,2.14024590558481,3.04130793658544,2.9367480345869,0.782391344348039,0.218025156380447,0.878744730937887,0.777719596297134,2.65974201088189,0,1.8456086666351,0.725362142011344,2.01656279485478,1.02903774414379,2.86533439938757,1.54701627683233,4.45096213891115,3.1739458756322,5.07065122804943,0.338844532069132,2.66788438833342,1.7997994345628,0.988866362566974,1.4209602298922,0.898800331555214,0.384218305321555,3.94020526772215,4.72520784160917,4.20649922702764,2.85650984403804,3.3130281142742,4.16468717330844,4.60058260887535,2.75765635983006,2.20231761998777,5.10749352340751,5.9906547969935,5.80299666012853,6.86157327018072,4.68822033501084,4.18774498502071,3.37657566019008,4.5839474333043,2.94628585473668,3.27454865837937,6.52398060388552,0.908714319998209,1.43585964202892,2.02905142091174,1.72084775396277,0,1.61910957491345,0.649776417447669,2.68816132258401,1.54488862144927,1.1930122580464,1.29893002301434,1.7666978725517,4.08445917352373,3.84979432242953,2.54805239706646,0,1.5154372870785,1.26679932737549,1.01104889002957,2.2836775943812,5.17875767294343,3.41416919849097,1.21439728736295,1.21786191324856,1.15307748628029,2.56228488939458,2.4693628498498,2.76466500925286,12.8541383221874,2.60278842455841,1.76922110389975,1.29413479957927,1.32504911076236,0.484875253135222,1.86391761218122,7.61230072230023,9.42510180660548,3.32094171771169,0.239630249011841,0.599902730993408,0.635351135365324,7.04016005202667,5.94750783664214,6.03140890141749,7.12679712788333,8.18289463457058,6.64921742590592,7.46309810111685,2.03678727700633,3.35898820647251,8.33985102831127,6.94458124425364,0.910843100738926,1.83921683546778,0.900310649026746,1.35634336052144,2.17716797284249,2.17793324484245,2.24884138943349,10.8655415710387,1.29340795759705,1.32374256117473,2.63926686245923,1.09597866213787,1.66828349535359,2.78601733217733,3.2925141825271,2.18937693500343,0.702213187313235,0.772043721344145,0.568326998791185,0.828503090142008,2.11073453982987,0.900310307305074,0.710234206755631,1.96764231747404,0.462801338662135,1.39520366850245,1.07309360559848,1.5179494507732,1.15191894939436,3.2833492815819,1.37816976227955,2.33919979880532,1.97595103761946,3.22095405024892,6.09840850835969,5.14523061896422,7.26921322564356,1.58670339998127,1.49301775374664,1.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18640 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q6GTL7,P70265 | |||
|association_with_transcript=-6bp_to_ENSMUST00000050406,NM_008825,NR_027859,uc007cmd.2,uc007cme.2,uc007cmg.2_5end | |||
|cluster_id=chr1:132612404..132612425,- | |||
|description=CAGE_peak_2_at_Pfkfb2_5end | |||
|id=chr1:132612404..132612425,- | |||
|ontology_enrichment_celltype=CL:0000117!4.77e-07!23;CL:0000337!4.77e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.61e-07,23;CL:0000337,4.61e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.52e-14!51;UBERON:0001049!4.53e-13!52;UBERON:0005068!4.53e-13!52;UBERON:0006241!4.53e-13!52;UBERON:0007135!4.53e-13!52;UBERON:0000955!9.30e-13!50;UBERON:0006238!9.30e-13!50;UBERON:0002616!2.94e-12!49;UBERON:0000033!2.30e-11!63;UBERON:0003080!3.74e-11!40;UBERON:0002780!1.27e-10!39;UBERON:0001890!1.27e-10!39;UBERON:0006240!1.27e-10!39;UBERON:0004121!1.17e-09!102;UBERON:0000924!1.17e-09!102;UBERON:0006601!1.17e-09!102;UBERON:0001017!1.22e-09!73;UBERON:0005743!1.22e-09!73;UBERON:0002020!1.42e-09!34;UBERON:0003056!3.72e-09!49;UBERON:0000073!9.13e-09!75;UBERON:0001016!9.13e-09!75;UBERON:0002791!9.28e-09!29;UBERON:0003528!9.28e-09!29;UBERON:0001893!9.28e-09!29;UBERON:0002346!3.76e-08!71;UBERON:0003075!3.76e-08!71;UBERON:0007284!3.76e-08!71;UBERON:0000468!1.57e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.91e-14,51;UBERON:0000073,3.78e-13,54;UBERON:0001049,5.07e-13,52;UBERON:0005068,5.07e-13,52;UBERON:0006241,5.07e-13,52;UBERON:0007135,5.07e-13,52;UBERON:0000955,4.74e-12,47;UBERON:0006238,4.74e-12,47;UBERON:0002616,1.48e-11,46;UBERON:0003080,4.56e-11,40;UBERON:0010371,8.17e-11,73;UBERON:0002780,1.55e-10,39;UBERON:0001890,1.55e-10,39;UBERON:0006240,1.55e-10,39;UBERON:0004121,1.59e-10,95;UBERON:0000924,1.59e-10,95;UBERON:0006601,1.59e-10,95;UBERON:0001017,1.08e-09,73;UBERON:0002020,1.75e-09,34;UBERON:0002346,3.10e-09,64;UBERON:0003075,3.10e-09,64;UBERON:0007284,3.10e-09,64;UBERON:0003056,6.19e-09,49;UBERON:0001016,9.40e-09,75;UBERON:0003528,1.15e-08,29;UBERON:0002791,1.15e-08,29;UBERON:0001893,1.15e-08,29 | |||
|phase1_expression=1.76163731815273,3.14077866875425,3.63999391511629,2.41971369045464,2.50447864973174,2.35030980676646,2.33612640595526,1.54947988129892,0,0.234064526321993,0.34243593645101,0,2.73921167889929,3.2345548895029,1.33243904726265,2.22722794128809,0.699561878128147,2.05050407482854,1.91960207048034,3.81950686618227,3.74190476664707,1.19149141441062,1.04479915655574,2.23989391910769,1.60586496747019,2.29692785646008,2.15380998079537,1.939241094173,2.85035129184561,2.26827116783938,2.43903561720835,1.90509202037889,1.84519436275371,0,3.17736781726402,0.831173226792462,1.42918549383658,3.34825304589526,0.7813353445238,1.0470474879476,0.588231488031014,0,0.485510353031154,2.14024590558481,3.04130793658544,2.9367480345869,0.782391344348039,0.218025156380447,0.878744730937887,0.777719596297134,2.65974201088189,0,1.8456086666351,0.725362142011344,2.01656279485478,1.02903774414379,2.86533439938757,1.54701627683233,4.45096213891115,3.1739458756322,5.07065122804943,0.338844532069132,2.66788438833342,1.7997994345628,0.988866362566974,1.4209602298922,0.898800331555214,0.384218305321555,3.94020526772215,4.72520784160917,4.20649922702764,2.85650984403804,3.3130281142742,4.16468717330844,4.60058260887535,2.75765635983006,2.20231761998777,5.10749352340751,5.9906547969935,5.80299666012853,6.86157327018072,4.68822033501084,4.18774498502071,3.37657566019008,4.5839474333043,2.94628585473668,3.27454865837937,6.52398060388552,0.908714319998209,1.43585964202892,2.02905142091174,1.72084775396277,0,1.61910957491345,0.649776417447669,2.68816132258401,1.54488862144927,1.1930122580464,1.29893002301434,1.7666978725517,4.08445917352373,3.84979432242953,2.54805239706646,0,1.5154372870785,1.26679932737549,1.01104889002957,2.2836775943812,5.17875767294343,3.41416919849097,1.21439728736295,1.21786191324856,1.15307748628029,2.56228488939458,2.4693628498498,2.76466500925286,12.8541383221874,2.60278842455841,1.76922110389975,1.29413479957927,1.32504911076236,0.484875253135222,1.86391761218122,7.61230072230023,9.42510180660548,3.32094171771169,0.239630249011841,0.599902730993408,0.635351135365324,7.04016005202667,5.94750783664214,6.03140890141749,7.12679712788333,8.18289463457058,6.64921742590592,7.46309810111685,2.03678727700633,3.35898820647251,8.33985102831127,6.94458124425364,0.910843100738926,1.83921683546778,0.900310649026746,1.35634336052144,2.17716797284249,2.17793324484245,2.24884138943349,10.8655415710387,1.29340795759705,1.32374256117473,2.63926686245923,1.09597866213787,1.66828349535359,2.78601733217733,3.2925141825271,2.18937693500343,0.702213187313235,0.772043721344145,0.568326998791185,0.828503090142008,2.11073453982987,0.900310307305074,0.710234206755631,1.96764231747404,0.462801338662135,1.39520366850245,1.07309360559848,1.5179494507732,1.15191894939436,3.2833492815819,1.37816976227955,2.33919979880532,1.97595103761946,3.22095405024892,6.09840850835969,5.14523061896422,7.26921322564356,1.58670339998127,1.49301775374664,1.62565670302307,2.70621668776396,7.66397393568702,5.11469500843202,5.89699440948933,1.89811624617805,3.29397909448022,5.27803938480566,3.58121649674071,5.45899443933536,5.39291645192533,4.32276099749388,3.98282546508734,0.758671603812327,1.37098215131675,1.1270773567308,2.03651327845314,2.32742984601151,2.66516115583211,3.60448261608267,3.83786384746966,3.767969468193,3.70191491765402,1.77871576252289,1.83529616287703,1.57247196090562,2.47348323623339,1.21716072833102,1.92941727801933,2.80088436959562,1.15078454980324,0.810676133875177,1.37280706594041,1.43768206527355,0.372140947668503,2.49630138491648,1.01031551178845,1.4351793081753,1.92977408545347,5.17308932466493,1.32643988239339,1.79261474086228,2.37643120085263,1.64283173801951,3.51763140627813,4.04674189506223,2.34160377429359,2.67979744980525,2.87904096543407,3.34855014180723,2.78567635016755,2.76295970985433,3.61622646453779,6.03165135757089,4.89515115436839,6.39293554924747,4.96686143348518,6.90367536947505,8.08760637486202,0.819674726883377,2.7771801992481,0,0.780877488593277,1.50796378412959,2.15071918157297,2.22798674082394,2.54768877709949,2.83367491172426,1.75353514746787,2.37172666767914,6.10510501201433,3.26462195979018,1.42452482933804,2.11753047159649,3.95928295134085,9.2921596837974,3.39892890616974,1.81394134178851,2.26326095707078,2.95301892880773,3.99665692327106,5.42699415653264,3.27180356529755,3.20847640546249,5.05658812697306,1.05418608574999,7.21948802737308,7.48967132658334,1.8006109403131,1.81102157295856,3.42939256050548,3.90148514013002,3.21063871683727,4.44282355625727,3.95804433848979,4.22409074514679,6.77862626764225,7.71849393192367,4.45192882941996,2.9063596805263,2.95533332147964,2.50681922406587,4.43180429311665,3.49777003955821,7.04616147639937,2.56306321196779,1.857481811669,0.925972636848558,1.50694765603753,1.91371918809435,2.51655990527175,0.679913719975421,0.559805809294632,0.276399947608848,2.86401185404534,0.949007980743406,1.62655573701479,3.13215488383224,2.50905955217362,2.62035076495413,2.96701562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| |||
|short_description=p2@Pfkfb2 | |||
}} |
Latest revision as of 07:59, 26 September 2015
Short description: | p2@Pfkfb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pfkfb2_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENSMUST00000050406, NM_008825, NR_027859, uc007cmd.2, uc007cme.2, uc007cmg.2_5end |
EntrezGene: | Pfkfb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.61e-07 | 23 |
neuroblast (sensu Vertebrata) | 4.61e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.91e-14 | 51 |
regional part of nervous system | 3.78e-13 | 54 |
neural tube | 5.07e-13 | 52 |
neural rod | 5.07e-13 | 52 |
future spinal cord | 5.07e-13 | 52 |
neural keel | 5.07e-13 | 52 |
brain | 4.74e-12 | 47 |
future brain | 4.74e-12 | 47 |
regional part of brain | 1.48e-11 | 46 |
anterior neural tube | 4.56e-11 | 40 |
ecto-epithelium | 8.17e-11 | 73 |
regional part of forebrain | 1.55e-10 | 39 |
forebrain | 1.55e-10 | 39 |
future forebrain | 1.55e-10 | 39 |
ectoderm-derived structure | 1.59e-10 | 95 |
ectoderm | 1.59e-10 | 95 |
presumptive ectoderm | 1.59e-10 | 95 |
central nervous system | 1.08e-09 | 73 |
gray matter | 1.75e-09 | 34 |
neurectoderm | 3.10e-09 | 64 |
neural plate | 3.10e-09 | 64 |
presumptive neural plate | 3.10e-09 | 64 |
pre-chordal neural plate | 6.19e-09 | 49 |
nervous system | 9.40e-09 | 75 |
brain grey matter | 1.15e-08 | 29 |
regional part of telencephalon | 1.15e-08 | 29 |
telencephalon | 1.15e-08 | 29 |