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FFCP PHASE1:Mm9::chr5:89315834..89315850,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=54403
|EntrezGene=54403
|HGNC=
|HGNC=
|MCL_coexpression_id=1626
|TSSclassifier=NA
|UniProt=O88343
|UniProt=O88343
|association_with_transcript=0bp_to_ENSMUST00000148750_5end
|association_with_transcript=0bp_to_ENSMUST00000148750_5end
|cluster_id=chr5:89315834..89315850,+
|description=CAGE_peak_1_at_Slc4a4_5end
|description=CAGE_peak_1_at_Slc4a4_5end
|id=chr5:89315834..89315850,+
|id=chr5:89315834..89315850,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000025!6.13e-13!114;UBERON:0004111!8.56e-11!122;UBERON:0001049!2.69e-09!52;UBERON:0005068!2.69e-09!52;UBERON:0006241!2.69e-09!52;UBERON:0007135!2.69e-09!52;UBERON:0000955!1.53e-08!50;UBERON:0006238!1.53e-08!50;UBERON:0001017!1.89e-08!73;UBERON:0005743!1.89e-08!73;UBERON:0002616!4.21e-08!49;UBERON:0003076!8.23e-08!12;UBERON:0003057!8.23e-08!12;UBERON:0000073!8.25e-08!75;UBERON:0001016!8.25e-08!75;UBERON:0000344!2.55e-07!15
|ontology_enrichment_uberon=UBERON:0000025!6.13e-13!114;UBERON:0004111!8.56e-11!122;UBERON:0001049!2.69e-09!52;UBERON:0005068!2.69e-09!52;UBERON:0006241!2.69e-09!52;UBERON:0007135!2.69e-09!52;UBERON:0000955!1.53e-08!50;UBERON:0006238!1.53e-08!50;UBERON:0001017!1.89e-08!73;UBERON:0005743!1.89e-08!73;UBERON:0002616!4.21e-08!49;UBERON:0003076!8.23e-08!12;UBERON:0003057!8.23e-08!12;UBERON:0000073!8.25e-08!75;UBERON:0001016!8.25e-08!75;UBERON:0000344!2.55e-07!15
|ontology_enrichment_uberon_v019_2=UBERON:0000025,5.89e-13,114;UBERON:0004111,8.29e-11,122;UBERON:0000073,2.24e-10,54;UBERON:0001049,2.61e-09,52;UBERON:0005068,2.61e-09,52;UBERON:0006241,2.61e-09,52;UBERON:0007135,2.61e-09,52;UBERON:0001017,1.85e-08,73;UBERON:0003076,8.05e-08,12;UBERON:0003057,8.05e-08,12;UBERON:0001016,8.08e-08,75;UBERON:0000344,2.50e-07,15;UBERON:0011216,2.51e-07,194;UBERON:0002346,3.53e-07,64;UBERON:0003075,3.53e-07,64;UBERON:0007284,3.53e-07,64;UBERON:0000955,4.33e-07,47;UBERON:0006238,4.33e-07,47
|phase1_expression=3.84357233051505,397.134013893593,390.844346635611,446.134711677574,521.933350604094,75.7135516322623,89.7072539886819,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,42.606688365686,0,0,95.195491562077,87.4049360865918,214.188522614903,164.981844528926,112.475983462034,133.776487297287,153.234318894038,102.661226433406,0,0,0,22.2415747208481,21.610503896604,28.3795405204693,0,0,0,0,0,0,31.2224108579432,39.2328723819521,1.28482726513177,110.317179553074,81.541408486287,22.1883044561817,46.8576056769023,96.7306173431255,71.8762821824858,0,0,0,13.1202312378333,41.8338822310585,44.8634720281375,10.3181395038395,13.2247744818008,15.2119536841483,36.5952094634663,80.9258264461137,2.2497492932035,0.988866362566974,0.7104801149461,83.2888307241165,146.771392632834,3.7328260431052,3.37514845829227,1.47227472945967,301.076137561609,229.92415113063,2.44981598429908,2.20444583341944,1.83843757322004,323.740690138203,290.105632129547,288.319462921969,6.59431438650969,7.04454855738554,11.9810075228055,265.782215049315,185.148898700423,235.309301576288,307.297614649035,270.221450156697,53.8694398435119,2.65041676666144,7.93501381121248,33.0445517119913,69.6943340354923,265.86879147973,92.8289489617046,98.7660154520457,133.512012355006,40.3075485778128,1.36344258062446,1.03914401841148,2.47337702157238,4.92951969218382,0,0,0,64.2978391803306,76.7680392389549,60.1574089567592,79.1294286453086,0.776813650941515,9.20341262201914,5.20455980298408,6.39377504455497,3.45923245884088,4.37095657602605,12.4644029563847,14.9543243682314,16.0676729027343,269.244002584875,0,7.44127509758082,5.07935492458905,3.39412677194655,85.7402101603362,250.913143038896,247.775454160317,118.787530671995,0,0,0,241.762091999384,117.120154321568,18.9738071690425,77.351822485563,66.7417343632163,218.385234832098,138.391797396797,20.1641940423626,14.3068016201607,21.2287117084287,67.3413938836717,6.24578126220978,6.20735681970377,8.10279584124071,11.1521565198429,12.3146063463903,11.5302348256365,13.118241438362,47.6014202159789,4.095791865724,4.34943984385984,7.9178005873777,5.04150184583422,8.61946472599353,10.447564995665,7.61393904709391,12.7381930763836,0,0,0.284163499395593,11.3919174894526,12.4298811789981,9.54328925743379,16.8088762265499,17.5120166255189,16.0437797402873,14.8821724640261,16.0964040839772,12.37712629092,17.114224391002,22.9834449710733,24.9691933401236,19.0059983652932,18.4422096844483,18.3862793701709,100.098015516525,19.7576855768226,406.084684287088,57.6502235326527,3.83918850963421,7.19933682767359,11.9846739029547,15.1262643467507,18.6797556829691,14.6473732106671,74.5010626624883,20.7520682952254,15.0801125280162,15.1206918751275,18.1316601020782,75.5008303269546,52.0892700198013,70.0977281855372,2.27601481143698,8.91138398355885,11.270773567308,15.6811522440892,21.7226785627741,25.8099817196372,27.6343667233004,20.3702004211851,24.0208053597303,31.0960853082937,77.670588296833,5.17219827719892,6.87956482896211,4.94696647246678,6.28866376304359,5.54707467430559,9.16653066413111,25.3172600956713,55.9366532373872,62.8745636200707,730.342489158961,135.831445899004,97.6677916848575,102.29444556858,73.3735421304621,100.34825244358,13.1174765018289,8.7166049414423,14.9927778326664,13.9190970335654,19.7139808562342,23.2833697844124,19.9956658344252,21.0744339686423,28.5319610832206,21.7035395855799,24.7154891419105,20.9745042836145,13.9874835311375,18.8043776155965,0,0,3.93411418415229,9.65778612066564,255.435988670577,200.900830819036,1.63934945376675,11.6136626514012,5.67914794949262,4.29482618726302,6.46270193198397,3.82350076724083,5.12436950389506,7.92614286208731,5.66734982344852,4.09158201075837,4.74345333535828,174.156153500619,26.6847360191545,14.2452482933804,20.5237568785506,69.4524217714374,2.65490276679926,6.31229654002952,6.34879469625977,5.84675747243284,9.7449624650655,13.2197113615889,12.9214146584111,10.9060118843252,17.4683715408513,8.21695570633122,8.4334886859999,6.18813259489121,16.3411010761818,10.9837267359099,12.0303575917962,16.0752776273694,26.4236948126988,29.6092237219437,24.517804069716,14.9187825066154,6.33613611772018,13.9809166770121,4.41056796109924,21.6000991353339,20.0215889102923,11.3991428114215,7.87857470420701,8.042904087508,65.5831882417164,286.852942210258,0,2.47664241555867,2.77791791054568,0.941842285023455,0.410082683163076,0.686334519619568,0.679913719975421,0.419854356970974,0.276399947608848,14.3200592702267,5.21954389408873,11.1825706919767,10.1525020372493,14.6361807210128,24.4566071395719,34.1206796353596,52.0716771069616,22.5110110106265,72.0659251502368,14.9121435140862,0,3.73791365109947,3.14371131868485,3.88902376688095,4.00395452780966,4.05494701177868,4.3422178298929,10.54655517236,3.14578033277133,0.483168241652012,2.88030006257865,12.6404448251271,8.31173382689673,11.5036272024607,5.06691209613401,6.08690765269437,5.16571522431289,2.88469078847925,3.69223817936443,5.75508764704442,5.10585604588499,3.7305688500631,4.58052039476836,2.98256709085021,4.09069157635491,3.62768613784338,1.10992976687032,0.448569283047378,0.335769232728157,16.4211154927362,21.9588496277883,34.0662021137113,6.85978813053011,2.00628841614145,132.716683015011,116.922610072823,108.850147553485,68.3975665727877,103.447460485367,99.7119944554405,103.953465035698,87.812634628723,92.4410514327777,119.60263201467,3.21740777510948,6.3843979744165,8.53668028770671,15.5588298923708,9.22297915563122,15.6266982182512,31.781282075631,27.6086976700118,30.1664057016306,25.2697211763797,32.9523089857312,28.2939512079114,24.2531504346995,25.5460358095428,25.9608319679372,29.0539151682675,28.855197160269,21.9916511328624,29.2580989570348,29.5869829470139,31.2011019670728,21.2970967391205,25.989544704258,28.4878976599364,27.7622672225225,26.4843722700947,22.500140663351,24.9916225865951,23.3583075814882,38.1576744727262,27.4046891866842,29.8468581597957,20.0523211153148,27.113947207544,22.9558867067558,17.9863616115321,25.9664085374403,61.0233793497167,61.5948429261676,54.7066719416398,51.0109238364927
|phase1_expression=3.84357233051505,397.134013893593,390.844346635611,446.134711677574,521.933350604094,75.7135516322623,89.7072539886819,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,42.606688365686,0,0,95.195491562077,87.4049360865918,214.188522614903,164.981844528926,112.475983462034,133.776487297287,153.234318894038,102.661226433406,0,0,0,22.2415747208481,21.610503896604,28.3795405204693,0,0,0,0,0,0,31.2224108579432,39.2328723819521,1.28482726513177,110.317179553074,81.541408486287,22.1883044561817,46.8576056769023,96.7306173431255,71.8762821824858,0,0,0,13.1202312378333,41.8338822310585,44.8634720281375,10.3181395038395,13.2247744818008,15.2119536841483,36.5952094634663,80.9258264461137,2.2497492932035,0.988866362566974,0.7104801149461,83.2888307241165,146.771392632834,3.7328260431052,3.37514845829227,1.47227472945967,301.076137561609,229.92415113063,2.44981598429908,2.20444583341944,1.83843757322004,323.740690138203,290.105632129547,288.319462921969,6.59431438650969,7.04454855738554,11.9810075228055,265.782215049315,185.148898700423,235.309301576288,307.297614649035,270.221450156697,53.8694398435119,2.65041676666144,7.93501381121248,33.0445517119913,69.6943340354923,265.86879147973,92.8289489617046,98.7660154520457,133.512012355006,40.3075485778128,1.36344258062446,1.03914401841148,2.47337702157238,4.92951969218382,0,0,0,64.2978391803306,76.7680392389549,60.1574089567592,79.1294286453086,0.776813650941515,9.20341262201914,5.20455980298408,6.39377504455497,3.45923245884088,4.37095657602605,12.4644029563847,14.9543243682314,16.0676729027343,269.244002584875,0,7.44127509758082,5.07935492458905,3.39412677194655,85.7402101603362,250.913143038896,247.775454160317,118.787530671995,0,0,0,241.762091999384,117.120154321568,18.9738071690425,77.351822485563,66.7417343632163,218.385234832098,138.391797396797,20.1641940423626,14.3068016201607,21.2287117084287,67.3413938836717,6.24578126220978,6.20735681970377,8.10279584124071,11.1521565198429,12.3146063463903,11.5302348256365,13.118241438362,47.6014202159789,4.095791865724,4.34943984385984,7.9178005873777,5.04150184583422,8.61946472599353,10.447564995665,7.61393904709391,12.7381930763836,0,0,0.284163499395593,11.3919174894526,12.4298811789981,9.54328925743379,16.8088762265499,17.5120166255189,16.0437797402873,14.8821724640261,16.0964040839772,12.37712629092,17.114224391002,22.9834449710733,24.9691933401236,19.0059983652932,18.4422096844483,18.3862793701709,100.098015516525,19.7576855768226,406.084684287088,57.6502235326527,3.83918850963421,7.19933682767359,11.9846739029547,15.1262643467507,18.6797556829691,14.6473732106671,74.5010626624883,20.7520682952254,15.0801125280162,15.1206918751275,18.1316601020782,75.5008303269546,52.0892700198013,70.0977281855372,2.27601481143698,8.91138398355885,11.270773567308,15.6811522440892,21.7226785627741,25.8099817196372,27.6343667233004,20.3702004211851,24.0208053597303,31.0960853082937,77.670588296833,5.17219827719892,6.87956482896211,4.94696647246678,6.28866376304359,5.54707467430559,9.16653066413111,25.3172600956713,55.9366532373872,62.8745636200707,730.342489158961,135.831445899004,97.6677916848575,102.29444556858,73.3735421304621,100.34825244358,13.1174765018289,8.7166049414423,14.9927778326664,13.9190970335654,19.7139808562342,23.2833697844124,19.9956658344252,21.0744339686423,28.5319610832206,21.7035395855799,24.7154891419105,20.9745042836145,13.9874835311375,18.8043776155965,0,0,3.93411418415229,9.65778612066564,255.435988670577,200.900830819036,1.63934945376675,11.6136626514012,5.67914794949262,4.29482618726302,6.46270193198397,3.82350076724083,5.12436950389506,7.92614286208731,5.66734982344852,4.09158201075837,4.74345333535828,174.156153500619,26.6847360191545,14.2452482933804,20.5237568785506,69.4524217714374,2.65490276679926,6.31229654002952,6.34879469625977,5.84675747243284,9.7449624650655,13.2197113615889,12.9214146584111,10.9060118843252,17.4683715408513,8.21695570633122,8.4334886859999,6.18813259489121,16.3411010761818,10.9837267359099,12.0303575917962,16.0752776273694,26.4236948126988,29.6092237219437,24.517804069716,14.9187825066154,6.33613611772018,13.9809166770121,4.41056796109924,21.6000991353339,20.0215889102923,11.3991428114215,7.87857470420701,8.042904087508,65.5831882417164,286.852942210258,0,2.47664241555867,2.77791791054568,0.941842285023455,0.410082683163076,0.686334519619568,0.679913719975421,0.419854356970974,0.276399947608848,14.3200592702267,5.21954389408873,11.1825706919767,10.1525020372493,14.6361807210128,24.4566071395719,34.1206796353596,52.0716771069616,22.5110110106265,72.0659251502368,14.9121435140862,0,3.73791365109947,3.14371131868485,3.88902376688095,4.00395452780966,4.05494701177868,4.3422178298929,10.54655517236,3.14578033277133,0.483168241652012,2.88030006257865,12.6404448251271,8.31173382689673,11.5036272024607,5.06691209613401,6.08690765269437,5.16571522431289,2.88469078847925,3.69223817936443,5.75508764704442,5.10585604588499,3.7305688500631,4.58052039476836,2.98256709085021,4.09069157635491,3.62768613784338,1.10992976687032,0.448569283047378,0.335769232728157,16.4211154927362,21.9588496277883,34.0662021137113,6.85978813053011,2.00628841614145,132.716683015011,116.922610072823,108.850147553485,68.3975665727877,103.447460485367,99.7119944554405,103.953465035698,87.812634628723,92.4410514327777,119.60263201467,3.21740777510948,6.3843979744165,8.53668028770671,15.5588298923708,9.22297915563122,15.6266982182512,31.781282075631,27.6086976700118,30.1664057016306,25.2697211763797,32.9523089857312,28.2939512079114,24.2531504346995,25.5460358095428,25.9608319679372,29.0539151682675,28.855197160269,21.9916511328624,29.2580989570348,29.5869829470139,31.2011019670728,21.2970967391205,25.989544704258,28.4878976599364,27.7622672225225,26.4843722700947,22.500140663351,24.9916225865951,23.3583075814882,38.1576744727262,27.4046891866842,29.8468581597957,20.0523211153148,27.113947207544,22.9558867067558,17.9863616115321,25.9664085374403,61.0233793497167,61.5948429261676,54.7066719416398,51.0109238364927
|short_description=p1@Slc4a4
|short_description=p1@Slc4a4
}}
}}

Latest revision as of 07:41, 26 September 2015

Short description:p1@Slc4a4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Slc4a4_5end
Coexpression cluster:MCL_coexpression_mm9:1626
Association with transcript: 0bp_to_ENSMUST00000148750_5end
EntrezGene:Slc4a4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Slc4a4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5397.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6390.84
CD326+ enterocyte, pool1.CNhs13542.11848-124I3446.13
CD326+ enterocyte, pool2.CNhs13197.11849-124I4521.93
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I775.71
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I889.71
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A342.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D195.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D287.40
GP2+ M cell, pool1.CNhs13228.11845-124H9214.19
GP2+ M cell, pool2.CNhs13231.11846-124I1164.98
GP2+ M cell, pool3.CNhs13240.11847-124I2112.48
Ileum epithelium, pool1.CNhs13199.10252-104B9133.78
Ileum epithelium, pool2.CNhs13232.10253-104C1153.23
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8102.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F522.24
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F621.61
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F728.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D831.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D939.23
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7110.32
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C281.54
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B822.19
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C346.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C496.73
Mouse Astrocytes, donor3.CNhs12107.11633-122C471.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E141.83
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C544.86
Mouse Granule cells, donor1.CNhs12131.11713-123C310.32
Mouse Granule cells, donor2.CNhs12357.11731-123E313.22
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C636.60
Mouse Meningeal cells, donor3.CNhs12109.11639-122D180.93
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C883.29
Mouse Microglia, donor2.CNhs12634.11736-123E8146.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1301.08
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5229.92
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3323.74
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3290.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7288.32
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.59
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4265.78
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5185.15
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6235.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6307.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6270.22
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E153.87
Mouse Schwann, donor1.CNhs12507.11728-123D92.65
Mouse Schwann, donor2.CNhs12573.11746-123F97.94
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G333.04
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F769.69
Mouse hepatocyte, donor1.CNhs13078.11714-123C4265.87
Mouse hepatocyte, donor3.CNhs12615.11637-122C892.83
Mouse hepatocyte, donor6.CNhs13090.11822-124F498.77
Mouse hepatocyte, donor8.CNhs13091.11824-124F6133.51
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A740.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G164.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G276.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G360.16
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B679.13
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D79.20
adrenal gland, embryo E14.CNhs11038.406-44C55.20
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C112.46
adrenal gland, neonate N25.CNhs11223.1377-27I314.95
amnion, adult pregnant day17.5.CNhs10488.583-22A816.07
aorta, adult.CNhs10498.46-23H1269.24
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F57.44
bone (os femoris), neonate N16.CNhs11225.1525-43A65.08
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H485.74
cerebellum, adult.CNhs10494.15-8B2250.91
cerebellum, neonate N30.CNhs11135.1395-42I2247.78
colon, adult.CNhs10468.36-18H7118.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4241.76
corpus striatum, adult.CNhs10487.19-21D8117.12
corpus striatum, neonate N00.CNhs11226.630-43F118.97
cortex, adult.CNhs10473.12-14D577.35
cortex, neonate N30.CNhs11107.1392-42F266.74
diencephalon, adult.CNhs10482.20-12F2218.39
diencephalon, neonate N30.CNhs11201.1388-42B2138.39
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.31
epididymis, adult.CNhs10490.58-23B221.23
eyeball, adult.CNhs10484.31-12G467.34
eyeball, embryo E12.CNhs11016.345-16C66.25
eyeball, embryo E14.CNhs10521.399-16E26.21
eyeball, embryo E15.CNhs10593.426-16C98.10
eyeball, embryo E17.CNhs11023.1261-18D411.15
eyeball, neonate N00.CNhs11207.633-15C612.31
eyeball, neonate N01.CNhs11140.1532-43E711.53
eyeball, neonate N02.CNhs11205.1551-44G813.12
eyeball, neonate N16.CNhs11188.777-19A247.60
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H24.35
forelimb, embryo E13.CNhs10589.384-1E27.92
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E78.62
forelimb, embryo E17.CNhs10598.1517-43C410.45
forelimb, embryo E18.CNhs11008.1520-43B57.61
gonad, embryo E13.CNhs11044.1564-45I612.74
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E911.39
heart, embryo E12.CNhs11015.353-12F512.43
heart, embryo E13.CNhs11013.376-3I99.54
heart, embryo E14.CNhs10597.403-26D416.81
heart, embryo E15.CNhs11017.431-16C817.51
heart, embryo E16.CNhs11021.457-17C616.04
heart, embryo E17.CNhs11025.479-18E514.88
heart, embryo E18.CNhs11030.1283-20G316.10
heart, neonate N00.CNhs11213.639-21E312.38
heart, neonate N03.CNhs11221.1349-25I217.11
heart, neonate N10.CNhs11118.749-24G122.98
heart, neonate N16.CNhs11209.782-15G124.97
heart, neonate N20.CNhs11127.821-26I619.01
heart, neonate N25.CNhs11196.1351-25D318.44
heart, neonate N30.CNhs11202.1390-42D218.39
hippocampus, adult.CNhs10478.13-16E8100.10
hippocampus, neonate N00.CNhs11228.627-43G119.76
intestinal mucosa, adult.CNhs10506.860-29I3406.08
intestine, adult.CNhs10496.178-9A357.65
intestine, embryo E12.CNhs11019.1251-16I53.84
intestine, embryo E13.CNhs11010.381-16D57.20
intestine, embryo E15.CNhs10602.976-16D811.98
intestine, embryo E16.CNhs10585.463-22H415.13
intestine, embryo E17.CNhs10582.482-18D318.68
intestine, embryo E18.CNhs10526.1289-20F714.65
intestine, neonate N00.CNhs11126.644-26D174.50
intestine, neonate N01.CNhs11192.1322-23E920.75
intestine, neonate N06.CNhs11102.688-20B815.08
intestine, neonate N07.CNhs11095.720-20F215.12
intestine, neonate N10.CNhs11098.755-23A518.13
intestine, neonate N20.CNhs11187.827-18D175.50
intestine, neonate N25.CNhs11121.1352-25E352.09
intestine, neonate N30.CNhs11131.1384-42G170.10
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F88.91
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I215.68
kidney, embryo E18.CNhs11001.1288-20C721.72
kidney, neonate N00.CNhs11214.646-21G725.81
kidney, neonate N10.CNhs11206.758-6D527.63
kidney, neonate N20.CNhs11113.832-19I120.37
kidney, neonate N25.CNhs11122.1353-25F324.02
kidney, neonate N30.CNhs11203.1385-42H131.10
liver, adult pregnant day01.CNhs10466.508-5B277.67
liver, embryo E12.CNhs10601.355-15F85.17
liver, embryo E13.CNhs10524.378-3H66.88
liver, embryo E14.CNhs10594.409-16E14.95
liver, embryo E15.CNhs10520.433-16D76.29
liver, embryo E16.CNhs10523.462-17F55.55
liver, embryo E17.CNhs10510.481-18A39.17
liver, embryo E18.CNhs10579.499-43G425.32
liver, neonate N00.CNhs11117.641-24F455.94
liver, neonate N03.CNhs11123.1345-25G262.87
liver, neonate N06.CNhs11101.684-20A8730.34
liver, neonate N07.CNhs11103.716-20H2135.83
liver, neonate N10.CNhs11115.751-24B997.67
liver, neonate N20.CNhs11220.823-25A3102.29
liver, neonate N25.CNhs11198.1368-26H173.37
liver, neonate N30.CNhs11106.1382-42D1100.35
lung, adult.CNhs10474.28-22B113.12
lung, embryo E12.CNhs10522.354-16G28.72
lung, embryo E14.CNhs10604.404-26F814.99
lung, embryo E15.CNhs11020.432-17C513.92
lung, embryo E16.CNhs10998.458-17B619.71
lung, embryo E17.CNhs10605.480-44A623.28
lung, embryo E18.CNhs10583.1287-20I620.00
lung, neonate N00.CNhs11224.640-42C621.07
lung, neonate N06.CNhs11212.683-20E528.53
lung, neonate N07.CNhs11111.715-19A321.70
lung, neonate N10.CNhs11219.750-23E624.72
lung, neonate N20.CNhs11109.822-18A420.97
lung, neonate N25.CNhs11119.1359-25C713.99
lung, neonate N30.CNhs11133.1394-42H218.80
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H29.66
medulla oblongata, adult.CNhs10477.17-12C2255.44
medulla oblongata, neonate N30.CNhs11200.1396-42A3200.90
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C211.61
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.68
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.46
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.93
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I9174.16
ovary, adult.CNhs10507.91-2I726.68
ovary, embryo E18.CNhs11040.505-44H714.25
ovary, neonate N00.CNhs11217.1299-22I420.52
oviduct, adult pregnant day01.CNhs10500.988-6G669.45
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F46.31
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E55.85
pancreas, embryo E17.CNhs10599.1558-45G39.74
pancreas, embryo E18.CNhs10580.1535-43I713.22
pancreas, neonate N00.CNhs11105.645-26G912.92
pancreas, neonate N01.CNhs11138.1531-43D710.91
pancreas, neonate N02.CNhs11139.1539-43D817.47
pancreas, neonate N16.CNhs11136.787-43B68.22
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G816.34
pituitary gland, embryo E12.CNhs11018.346-16E610.98
pituitary gland, embryo E13.CNhs11009.370-44C712.03
pituitary gland, embryo E14.CNhs11037.398-44A516.08
pituitary gland, embryo E15.CNhs10592.427-16B926.42
pituitary gland, embryo E16.CNhs11036.449-43F629.61
pituitary gland, embryo E17.CNhs11039.1265-44F524.52
pituitary gland, neonate N00.CNhs11190.1308-22E914.92
placenta, adult pregnant day10.CNhs10472.539-13I76.34
placenta, adult pregnant day17.CNhs10464.577-18G313.98
prostate, adult.CNhs10470.859-1F84.41
skin, adult.CNhs10492.30-1C321.60
skin, neonate N00.CNhs11124.650-25G420.02
skin, neonate N03.CNhs11215.662-22H311.40
skin, neonate N06.CNhs11097.693-20I57.88
skin, neonate N10.CNhs11108.762-6C48.04
small intestine, neonate N16.CNhs11114.790-21I165.58
spinal cord, adult.CNhs10505.24-13C9286.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H614.32
stomach, embryo E12.CNhs10588.356-43E35.22
stomach, embryo E15.CNhs10603.1252-16G811.18
stomach, embryo E16.CNhs11022.459-17D410.15
stomach, embryo E17.CNhs11006.1035-18D514.64
stomach, embryo E18.CNhs10999.1286-20C624.46
stomach, neonate N03.CNhs11193.1340-24B834.12
stomach, neonate N07.CNhs11210.718-18A952.07
stomach, neonate N25.CNhs11104.1355-25E422.51
stomach, neonate N30.CNhs11134.1386-42I172.07
submandibular gland, adult.CNhs10469.59-29C114.91
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.74
testis, embryo E15.CNhs11034.443-27C53.14
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I54.00
testis, embryo E18.CNhs11027.503-18G54.05
testis, neonate N00.CNhs11189.1300-22B74.34
testis, neonate N07.CNhs11222.726-26I410.55
testis, neonate N10.CNhs11204.763-44D93.15
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B512.64
thymus, embryo E14.CNhs11041.402-44I48.31
thymus, embryo E15.CNhs11005.430-45I211.50
thymus, embryo E16.CNhs11002.456-26C55.07
thymus, embryo E17.CNhs10581.478-18C16.09
thymus, embryo E18.CNhs10595.1273-19G45.17
thymus, neonate N02.CNhs11181.1541-43F82.88
thymus, neonate N03.CNhs11137.2104-43C73.69
thymus, neonate N06.CNhs11197.681-26C45.76
thymus, neonate N07.CNhs11211.713-19D35.11
thymus, neonate N10.CNhs11194.748-24E43.73
thymus, neonate N20.CNhs11186.820-7A24.58
thymus, neonate N25.CNhs11125.1362-25G72.98
thymus, neonate N30.CNhs11132.1393-42G24.09
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E416.42
uterus, adult pregnant day19.CNhs10497.590-15F521.96
uterus, adult.CNhs10509.92-27E534.07
vagina, adult.CNhs10502.89-27D56.86
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1132.72
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2116.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3108.85
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D768.40
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4103.45
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A599.71
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6103.95
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A787.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A892.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9119.60
whole body, embryo E11.CNhs11014.324-5I83.22
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H28.54
whole body, embryo E14.5.CNhs10578.420-27D215.56
whole body, embryo E14.CNhs10519.395-14B19.22
whole body, embryo E16.CNhs10514.453-14F215.63
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G531.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G527.61
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G530.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G525.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G532.95
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G528.29
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G524.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G525.55
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G525.96
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G529.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G528.86
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G521.99
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G529.26
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G529.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G531.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G521.30
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G525.99
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G528.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G527.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G526.48
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G522.50
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G524.99
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G523.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G538.16
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G527.40
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G529.85
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G527.11
whole body, embryo E17.5.CNhs10513.490-9F922.96
whole body, embryo E17.CNhs10517.475-3I517.99
whole body, embryo E18.CNhs10516.493-3B325.97
whole body, neonate N00.CNhs10525.657-19C261.02
whole body, neonate N01.CNhs10576.659-23C661.59
whole body, neonate N06.CNhs10515.692-21D154.71
whole body, neonate N10.CNhs10518.761-6B451.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
tube5.89e-13114
anatomical conduit8.29e-11122
regional part of nervous system2.24e-1054
neural tube2.61e-0952
neural rod2.61e-0952
future spinal cord2.61e-0952
neural keel2.61e-0952
central nervous system1.85e-0873
posterior neural tube8.05e-0812
chordal neural plate8.05e-0812
nervous system8.08e-0875
mucosa2.50e-0715
organ system subdivision2.51e-07194
neurectoderm3.53e-0764
neural plate3.53e-0764
presumptive neural plate3.53e-0764
brain4.33e-0747
future brain4.33e-0747
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