FFCP PHASE1:Mm9::chr5:89193953..89193971,+: Difference between revisions
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{{FFCP|EntrezGene=13178|HGNC=|MCL_coexpression_id=13|UniProt=P43346|association_with_transcript=-49bp_to_ENSMUST00000031311_5end|description=CAGE_peak_8_at_Dck_5end|id=chr5:89193953..89193971,+|ontology_enrichment_celltype=CL:0000117!1.66e-13!23;CL:0000337!1.66e-13!23;CL:0000540!2.19e-11!33;CL:0000047!2.19e-11!33;CL:0000031!2.19e-11!33;CL:0000404!2.19e-11!33;CL:0000221!1.89e-10!44;CL:0000133!1.89e-10!44;CL:0002319!3.46e-10!43;CL:0000393!6.95e-08!39;CL:0000211!6.95e-08!39;CL:0000055!7.18e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.53e-19,23;CL:0000337,2.53e-19,23;CL:0000540,6.20e-13,33;CL:0000047,6.20e-13,33;CL:0000031,6.20e-13,33;CL:0000404,6.20e-13,33;CL:0000221,6.01e-10,44;CL:0000133,6.01e-10,44;CL:0000393,1.23e-09,39;CL:0000211,1.23e-09,39;CL:0002319,1.39e-09,43;CL:0002609,2.15e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.77e-22!73;UBERON:0005743!1.77e-22!73;UBERON:0000073!7.36e-22!75;UBERON:0001016!7.36e-22!75;UBERON:0000153!1.27e-21!94;UBERON:0007811!2.72e-21!86;UBERON:0001049!1.37e-20!52;UBERON:0005068!1.37e-20!52;UBERON:0006241!1.37e-20!52;UBERON:0007135!1.37e-20!52;UBERON:0000955!3.55e-19!50;UBERON:0006238!3.55e-19!50;UBERON:0000033!9.01e-19!63;UBERON:0002616!9.44e-19!49;UBERON:0002020!1.40e-18!34;UBERON:0002346!8.23e-18!71;UBERON:0003075!8.23e-18!71;UBERON:0007284!8.23e-18!71;UBERON:0004121!4.66e-17!102;UBERON:0000924!4.66e-17!102;UBERON:0006601!4.66e-17!102;UBERON:0002791!9.23e-16!29;UBERON:0003528!9.23e-16!29;UBERON:0001893!9.23e-16!29;UBERON:0003080!3.55e-15!40;UBERON:0003056!5.00e-15!49;UBERON:0002780!1.27e-14!39;UBERON:0001890!1.27e-14!39;UBERON:0006240!1.27e-14!39;UBERON:0000956!1.53e-12!21;UBERON:0001869!1.53e-12!21;UBERON:0000203!1.53e-12!21;UBERON:0002619!5.19e-10!17;UBERON:0000064!1.69e-07!99;UBERON:0000477!2.14e-07!154;UBERON:0002021!3.16e-07!10;UBERON:0000411!3.16e-07!10;UBERON:0001950!3.16e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.37e-30,54;UBERON:0001049,2.82e-28,52;UBERON:0005068,2.82e-28,52;UBERON:0006241,2.82e-28,52;UBERON:0007135,2.82e-28,52;UBERON:0002020,1.11e-26,34;UBERON:0001017,1.19e-26,73;UBERON:0001016,2.02e-25,75;UBERON:0002346,3.24e-24,64;UBERON:0003075,3.24e-24,64;UBERON:0007284,3.24e-24,64;UBERON:0000955,1.27e-23,47;UBERON:0006238,1.27e-23,47;UBERON:0002616,5.46e-23,46;UBERON:0003528,2.50e-22,29;UBERON:0002791,2.50e-22,29;UBERON:0001893,2.50e-22,29;UBERON:0003080,9.42e-21,40;UBERON:0010371,4.75e-20,73;UBERON:0002780,6.54e-20,39;UBERON:0001890,6.54e-20,39;UBERON:0006240,6.54e-20,39;UBERON:0004121,2.24e-19,95;UBERON:0000924,2.24e-19,95;UBERON:0006601,2.24e-19,95;UBERON:0000956,4.99e-18,21;UBERON:0001869,4.99e-18,21;UBERON:0000203,4.99e-18,21;UBERON:0003056,1.08e-17,49;UBERON:0002619,3.99e-14,17;UBERON:0010314,1.70e-12,92;UBERON:0002021,2.47e-10,10;UBERON:0000411,2.47e-10,10;UBERON:0001950,2.47e-10,10;UBERON:0011216,4.42e-08,194;UBERON:0003076,5.89e-08,12;UBERON:0003057,5.89e-08,12;UBERON:0000119,1.40e-07,176;UBERON:0000483,2.14e-07,174|phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,1.16210991097419,0.422366166455,0.936258105287974,0,0.159544317990673,1.19840510951844,1.92324885321794,0.999329285446988,2.02475267389826,4.19737126876888,1.10411757875383,0.548457734422955,0.84877930359606,0.680346321208558,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0,0.332469290716985,0,1.25559489221072,0,1.0470474879476,4.70585190424811,6.14740936462601,1.94204141212461,0.125896817975577,0.202753862439029,0.183546752161682,1.56478268869608,0.65407546914134,0.439372365468944,1.36100929351998,0.419959264876088,0,0.167782606057736,1.45072428402269,0.336093799142464,0.257259436035947,0,0,2.83243045203437,7.93486468908049,8.23980824558033,0,1.77858959222228,0,0,0.7104801149461,0.898800331555214,0.768436610643109,4.04389488003063,4.86021377994086,5.46844899513593,2.85650984403804,2.65042249141936,4.16468717330844,3.54628242767475,5.51531271966013,2.20231761998777,3.95830748064082,2.91852413186863,3.29715719325485,2.65314166446988,2.6045668527838,4.4669279840221,0.56276261003168,1.98637722109853,2.65165726926301,3.41692033917847,3.91438836233131,0.151452386666368,0.68014404096107,0.289864488701678,0,0.679971333707751,1.07940638327563,0,0.448026887097336,0,0.170430322578058,0,0,1.26759077799012,0,0,0,0,0.253359865475099,0,0.68510327831436,0.517875767294343,0.148442139064825,0.346970653532272,0.608930956624282,0,0.60289056221049,0.587943535678524,0.125666591329675,0,0.289198713839823,0.884610551949874,0.485300549842228,0,0,0,1.17112318804619,1.8850203613211,0.510914110417183,0,0,0,3.2953940669061,2.28750301409313,2.51308704225729,3.30266208365325,2.30143911597297,2.28566849015516,2.59586020908412,0.305518091550949,0.248813941220186,0.505445516867349,0.631325567659422,0.390361328888111,1.37941262660084,0.360124259610698,1.05493372485001,0.612328492361951,1.40925092313335,0.843315521037559,0.517406741478031,0.215567992932842,1.1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13178 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=P43346 | |||
|association_with_transcript=-49bp_to_ENSMUST00000031311_5end | |||
|cluster_id=chr5:89193953..89193971,+ | |||
|description=CAGE_peak_8_at_Dck_5end | |||
|id=chr5:89193953..89193971,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.66e-13!23;CL:0000337!1.66e-13!23;CL:0000540!2.19e-11!33;CL:0000047!2.19e-11!33;CL:0000031!2.19e-11!33;CL:0000404!2.19e-11!33;CL:0000221!1.89e-10!44;CL:0000133!1.89e-10!44;CL:0002319!3.46e-10!43;CL:0000393!6.95e-08!39;CL:0000211!6.95e-08!39;CL:0000055!7.18e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.53e-19,23;CL:0000337,2.53e-19,23;CL:0000540,6.20e-13,33;CL:0000047,6.20e-13,33;CL:0000031,6.20e-13,33;CL:0000404,6.20e-13,33;CL:0000221,6.01e-10,44;CL:0000133,6.01e-10,44;CL:0000393,1.23e-09,39;CL:0000211,1.23e-09,39;CL:0002319,1.39e-09,43;CL:0002609,2.15e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.77e-22!73;UBERON:0005743!1.77e-22!73;UBERON:0000073!7.36e-22!75;UBERON:0001016!7.36e-22!75;UBERON:0000153!1.27e-21!94;UBERON:0007811!2.72e-21!86;UBERON:0001049!1.37e-20!52;UBERON:0005068!1.37e-20!52;UBERON:0006241!1.37e-20!52;UBERON:0007135!1.37e-20!52;UBERON:0000955!3.55e-19!50;UBERON:0006238!3.55e-19!50;UBERON:0000033!9.01e-19!63;UBERON:0002616!9.44e-19!49;UBERON:0002020!1.40e-18!34;UBERON:0002346!8.23e-18!71;UBERON:0003075!8.23e-18!71;UBERON:0007284!8.23e-18!71;UBERON:0004121!4.66e-17!102;UBERON:0000924!4.66e-17!102;UBERON:0006601!4.66e-17!102;UBERON:0002791!9.23e-16!29;UBERON:0003528!9.23e-16!29;UBERON:0001893!9.23e-16!29;UBERON:0003080!3.55e-15!40;UBERON:0003056!5.00e-15!49;UBERON:0002780!1.27e-14!39;UBERON:0001890!1.27e-14!39;UBERON:0006240!1.27e-14!39;UBERON:0000956!1.53e-12!21;UBERON:0001869!1.53e-12!21;UBERON:0000203!1.53e-12!21;UBERON:0002619!5.19e-10!17;UBERON:0000064!1.69e-07!99;UBERON:0000477!2.14e-07!154;UBERON:0002021!3.16e-07!10;UBERON:0000411!3.16e-07!10;UBERON:0001950!3.16e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.37e-30,54;UBERON:0001049,2.82e-28,52;UBERON:0005068,2.82e-28,52;UBERON:0006241,2.82e-28,52;UBERON:0007135,2.82e-28,52;UBERON:0002020,1.11e-26,34;UBERON:0001017,1.19e-26,73;UBERON:0001016,2.02e-25,75;UBERON:0002346,3.24e-24,64;UBERON:0003075,3.24e-24,64;UBERON:0007284,3.24e-24,64;UBERON:0000955,1.27e-23,47;UBERON:0006238,1.27e-23,47;UBERON:0002616,5.46e-23,46;UBERON:0003528,2.50e-22,29;UBERON:0002791,2.50e-22,29;UBERON:0001893,2.50e-22,29;UBERON:0003080,9.42e-21,40;UBERON:0010371,4.75e-20,73;UBERON:0002780,6.54e-20,39;UBERON:0001890,6.54e-20,39;UBERON:0006240,6.54e-20,39;UBERON:0004121,2.24e-19,95;UBERON:0000924,2.24e-19,95;UBERON:0006601,2.24e-19,95;UBERON:0000956,4.99e-18,21;UBERON:0001869,4.99e-18,21;UBERON:0000203,4.99e-18,21;UBERON:0003056,1.08e-17,49;UBERON:0002619,3.99e-14,17;UBERON:0010314,1.70e-12,92;UBERON:0002021,2.47e-10,10;UBERON:0000411,2.47e-10,10;UBERON:0001950,2.47e-10,10;UBERON:0011216,4.42e-08,194;UBERON:0003076,5.89e-08,12;UBERON:0003057,5.89e-08,12;UBERON:0000119,1.40e-07,176;UBERON:0000483,2.14e-07,174 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,1.16210991097419,0.422366166455,0.936258105287974,0,0.159544317990673,1.19840510951844,1.92324885321794,0.999329285446988,2.02475267389826,4.19737126876888,1.10411757875383,0.548457734422955,0.84877930359606,0.680346321208558,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0,0.332469290716985,0,1.25559489221072,0,1.0470474879476,4.70585190424811,6.14740936462601,1.94204141212461,0.125896817975577,0.202753862439029,0.183546752161682,1.56478268869608,0.65407546914134,0.439372365468944,1.36100929351998,0.419959264876088,0,0.167782606057736,1.45072428402269,0.336093799142464,0.257259436035947,0,0,2.83243045203437,7.93486468908049,8.23980824558033,0,1.77858959222228,0,0,0.7104801149461,0.898800331555214,0.768436610643109,4.04389488003063,4.86021377994086,5.46844899513593,2.85650984403804,2.65042249141936,4.16468717330844,3.54628242767475,5.51531271966013,2.20231761998777,3.95830748064082,2.91852413186863,3.29715719325485,2.65314166446988,2.6045668527838,4.4669279840221,0.56276261003168,1.98637722109853,2.65165726926301,3.41692033917847,3.91438836233131,0.151452386666368,0.68014404096107,0.289864488701678,0,0.679971333707751,1.07940638327563,0,0.448026887097336,0,0.170430322578058,0,0,1.26759077799012,0,0,0,0,0.253359865475099,0,0.68510327831436,0.517875767294343,0.148442139064825,0.346970653532272,0.608930956624282,0,0.60289056221049,0.587943535678524,0.125666591329675,0,0.289198713839823,0.884610551949874,0.485300549842228,0,0,0,1.17112318804619,1.8850203613211,0.510914110417183,0,0,0,3.2953940669061,2.28750301409313,2.51308704225729,3.30266208365325,2.30143911597297,2.28566849015516,2.59586020908412,0.305518091550949,0.248813941220186,0.505445516867349,0.631325567659422,0.390361328888111,1.37941262660084,0.360124259610698,1.05493372485001,0.612328492361951,1.40925092313335,0.843315521037559,0.517406741478031,0.215567992932842,1.13463648100692,1.93546236580344,0.43839146485515,0.834141747676794,1.0447564995665,0.411564272815887,0,0,0,0,0.828503090142008,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.617068451549513,0,0.268273401399619,0.233530684734339,0.16455984991348,0.164167464079095,0.324275238183423,0.292399974850665,0.658650345873152,0.134206418760372,3.78521907415429,4.01327988279209,0,0,0.426576501070468,0,0.257734922644187,0,0.889512175379481,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0.189667900953082,0.456994050438915,0,0.203651327845314,0,0.140271639780637,0.316182685621286,0,0.31399745568275,0,0,1.00107063429656,0.393117990226406,0.449724224769707,0.608580364165509,0.482354319504834,0.763877555344259,0.863088412352432,0,0.274561413188081,0,1.48856379067401,0,0.505157755894224,0,0,0.184753190166605,0.757965647081939,0.325929952884052,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.318909537314974,0,0.345369963731791,0.144649058581512,3.01582567878545,1.08781136763742,0.983528546038072,0,3.21101179975584,2.22702204525186,0.163934945376675,0.252470927204373,0.631016438832513,0.390438744296638,1.50796378412959,0.716906393857656,0.222798674082394,1.13230612315533,0.809621403349789,0.876767573733936,0,1.92792789853084,0.141940085208269,0,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0.377210159511796,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,1.36175842301515,1.08036656418786,1.03486947026204,0.643011105094777,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0.938686832254841,0.21183207086382,0.882113592219848,0.65954501176592,0.322928853391811,0.361877549568935,0,0,0,3.70850604021019,1.02522528478712,0.206386867963223,0.370389054739423,1.31857919903284,0.683471138605126,1.37266903923914,0,0.279902904647316,0,0,0.790839983952838,0.406638934253697,0.324016022465404,0.209088296014469,0,0.539457385539283,0.0826534557253359,0,0,0.621339313086926,0,0.598066184175915,0,0.194451188344048,0.645799117388655,1.01373675294467,0.117357238645754,0.911430693907651,0.943734099831398,0.483168241652012,0.288030006257865,2.52808896502543,1.21635129174099,1.43795340030758,1.68897069871134,1.9692936523423,1.39076948346885,1.80293174279953,1.32920574457119,1.21159739937777,1.600342939755,2.72230699869469,2.63136277997332,1.6356013078856,2.10378423926824,0.226730383615211,0.443971906748129,0.0897138566094757,0,0.386379188064381,0.375364950902364,0.183151624267265,0.643105137237198,0,3.95326289831947,5.9842280745933,5.15605962095457,3.60891682921744,3.42541259885321,2.2661816921691,3.37511250115903,4.5032120322422,2.26571204492102,5.1776031175182,1.03787347584177,1.59609949360412,2.21953687480374,0.972426868273176,0.838452650511929,1.83843508450014,0.666740183404846,1.03017528619447,1.28367683836726,0.252697211763798,0.50695859978048,0.188626341386076,0.842773567228942,0.768301828858431,0.746661096422973,1.90517476513229,0.927074607558844,0.964546102318525,2.06042950401653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| |||
|short_description=p8@Dck | |||
}} |
Latest revision as of 07:37, 26 September 2015
Short description: | p8@Dck |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Dck_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -49bp_to_ENSMUST00000031311_5end |
EntrezGene: | Dck |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.53e-19 | 23 |
neuroblast (sensu Vertebrata) | 2.53e-19 | 23 |
neuron | 6.20e-13 | 33 |
neuronal stem cell | 6.20e-13 | 33 |
neuroblast | 6.20e-13 | 33 |
electrically signaling cell | 6.20e-13 | 33 |
ectodermal cell | 6.01e-10 | 44 |
neurectodermal cell | 6.01e-10 | 44 |
electrically responsive cell | 1.23e-09 | 39 |
electrically active cell | 1.23e-09 | 39 |
neural cell | 1.39e-09 | 43 |
neuron of cerebral cortex | 2.15e-07 | 6 |