Personal tools

FFCP PHASE1:Mm9::chr7:17545063..17545149,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=71691
|EntrezGene=71691
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q80VM8
|UniProt=Q80VM8
|association_with_transcript=0bp_to_ENSMUST00000038163,NM_001007569,uc009fip.1_5end
|association_with_transcript=0bp_to_ENSMUST00000038163,NM_001007569,uc009fip.1_5end
|cluster_id=chr7:17545063..17545149,+
|description=CAGE_peak_1_at_Pnmal1_5end
|description=CAGE_peak_1_at_Pnmal1_5end
|id=chr7:17545063..17545149,+
|id=chr7:17545063..17545149,+
|ontology_enrichment_celltype=CL:0000117!9.25e-14!23;CL:0000337!9.25e-14!23;CL:0000540!1.62e-12!33;CL:0000047!1.62e-12!33;CL:0000031!1.62e-12!33;CL:0000404!1.62e-12!33;CL:0002319!1.86e-09!43;CL:0000221!2.60e-09!44;CL:0000133!2.60e-09!44;CL:0000393!3.84e-08!39;CL:0000211!3.84e-08!39
|ontology_enrichment_celltype=CL:0000117!9.25e-14!23;CL:0000337!9.25e-14!23;CL:0000540!1.62e-12!33;CL:0000047!1.62e-12!33;CL:0000031!1.62e-12!33;CL:0000404!1.62e-12!33;CL:0002319!1.86e-09!43;CL:0000221!2.60e-09!44;CL:0000133!2.60e-09!44;CL:0000393!3.84e-08!39;CL:0000211!3.84e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,4.64e-15,23;CL:0000337,4.64e-15,23;CL:0000540,4.67e-12,33;CL:0000047,4.67e-12,33;CL:0000031,4.67e-12,33;CL:0000404,4.67e-12,33;CL:0000393,2.64e-08,39;CL:0000211,2.64e-08,39;CL:0002319,7.42e-08,43;CL:0000221,2.07e-07,44;CL:0000133,2.07e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!4.53e-33!71;UBERON:0003075!4.53e-33!71;UBERON:0007284!4.53e-33!71;UBERON:0001017!4.55e-30!73;UBERON:0005743!4.55e-30!73;UBERON:0000073!1.30e-28!75;UBERON:0001016!1.30e-28!75;UBERON:0001049!8.77e-28!52;UBERON:0005068!8.77e-28!52;UBERON:0006241!8.77e-28!52;UBERON:0007135!8.77e-28!52;UBERON:0000033!3.58e-27!63;UBERON:0000955!6.17e-27!50;UBERON:0006238!6.17e-27!50;UBERON:0002616!3.04e-26!49;UBERON:0004121!4.04e-26!102;UBERON:0000924!4.04e-26!102;UBERON:0006601!4.04e-26!102;UBERON:0003056!3.47e-25!49;UBERON:0003080!1.81e-22!40;UBERON:0002780!9.12e-22!39;UBERON:0001890!9.12e-22!39;UBERON:0006240!9.12e-22!39;UBERON:0002020!2.09e-19!34;UBERON:0002791!1.17e-16!29;UBERON:0003528!1.17e-16!29;UBERON:0001893!1.17e-16!29;UBERON:0007811!3.96e-13!86;UBERON:0000956!1.26e-11!21;UBERON:0001869!1.26e-11!21;UBERON:0000203!1.26e-11!21;UBERON:0000153!4.16e-11!94;UBERON:0002619!1.19e-09!17;UBERON:0002021!2.35e-08!10;UBERON:0000411!2.35e-08!10;UBERON:0001950!2.35e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.79e-32,64;UBERON:0003075,1.79e-32,64;UBERON:0007284,1.79e-32,64;UBERON:0000073,1.67e-30,54;UBERON:0001017,2.05e-29,73;UBERON:0001049,7.30e-29,52;UBERON:0005068,7.30e-29,52;UBERON:0006241,7.30e-29,52;UBERON:0007135,7.30e-29,52;UBERON:0001016,8.90e-28,75;UBERON:0003056,1.12e-26,49;UBERON:0000955,1.13e-25,47;UBERON:0006238,1.13e-25,47;UBERON:0010371,2.51e-25,73;UBERON:0002616,6.23e-25,46;UBERON:0004121,6.72e-24,95;UBERON:0000924,6.72e-24,95;UBERON:0006601,6.72e-24,95;UBERON:0003080,1.22e-23,40;UBERON:0002780,7.21e-23,39;UBERON:0001890,7.21e-23,39;UBERON:0006240,7.21e-23,39;UBERON:0002020,2.95e-20,34;UBERON:0010314,5.64e-20,92;UBERON:0003528,3.17e-17,29;UBERON:0002791,3.17e-17,29;UBERON:0001893,3.17e-17,29;UBERON:0000956,1.03e-11,21;UBERON:0001869,1.03e-11,21;UBERON:0000203,1.03e-11,21;UBERON:0002619,1.53e-09,17;UBERON:0002021,4.42e-09,10;UBERON:0000411,4.42e-09,10;UBERON:0001950,4.42e-09,10;UBERON:0002420,8.09e-07,8;UBERON:0007245,8.09e-07,8;UBERON:0010009,8.09e-07,8;UBERON:0010011,8.09e-07,8;UBERON:0000454,8.09e-07,8
|phase1_expression=1.12104192973356,0,0,0,0,1.6787927191189,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,17.093701320365,0,0,0.319984845586813,0.45881856213434,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.74420125104357,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,50.9837481366186,62.9499265333719,42.466704034914,0.338844532069132,0,0,0,0,2.39680088414724,1.15265491596466,16.279269132431,18.0907957364465,14.9330722559481,37.7059299413021,45.719787976984,23.885705846916,23.7696768125226,21.1420320920305,69.3730050296149,68.1850385374902,83.5619540913964,87.0449499019279,81.6984657369518,78.137005583514,60.3035277842983,104.111082855861,97.1796855860512,42.4265163082082,41.2877874317399,37.839087502536,0,0.151143120213571,0,0,0,0.539703191637817,0,0,3.93244376368905,0,0,0,0.704217098883403,0,0,0,0,0,0,2.96878087269556,0,5.64080128446334,5.55153045651635,7.91610243611567,7.61031140944993,11.1534754008941,7.4080885495494,3.39299796590124,0,0,0,0.161766849947409,0,0,1.86391761218122,30.7419836862124,26.3902850584953,1.27728527604296,0,0,0,87.9271053306309,91.5001205637253,32.1675141408933,108.814024440365,123.254850433219,91.2189515616469,98.4804466821289,1.62942982160506,0,0,3.57751155007006,7.026503919986,7.12696523743766,9.00310649026746,7.38453607395004,10.1374383735478,12.9394857487698,7.30873451565885,11.6416516832557,1.07783996466421,1.13463648100692,0.527853372491847,1.09597866213787,0,0,0,2.38841120182192,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0,0.16455984991348,0,0,0.146199987425332,0,0,123.019619910014,45.2780294468851,0,1.58670339998127,1.91959425481711,1.85789337488351,1.67527699718721,1.61346819698674,2.00140239460383,1.33157938278791,0.949058123089023,2.30578536613615,2.76468729680296,2.78539060857611,2.33956904542944,0.898819408654221,0.864552199498777,0.796565093017469,1.70701110857774,2.51346727741403,0,0,0.193952487167626,0.210407459670956,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.757965647081939,0,0.339490171550376,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,51.5367393860812,48.9944849955409,0,0,2.2085575359138,3.12350995437311,6.46270193198397,0.955875191810208,0.891194696329576,0.566153061577665,1.61924280669958,3.79932615284705,5.13874111330481,80.00900778903,0.425820255624806,4.62970569534864,2.28041743095006,0.164970122972535,2.65490276679926,5.82673526771955,5.13950046840077,3.58349651536206,5.02013217897314,3.99665692327106,3.6179961043551,7.99774204850512,3.20847640546249,2.52829406348653,1.05418608574999,0,50.0446220458068,9.72329907769075,11.6422815404479,9.21649250635847,13.3005175231705,19.9773075714319,30.4415688113924,35.0134691481789,0,0,0.882113592219848,0,0,0,0,0,0.874442509889552,39.6810146302491,0,0.82554747185289,0.555583582109135,0,0,0,0,0,0,0,1.42351197111511,1.01659733563424,1.83609079397062,2.29997125615916,2.62035076495413,1.88810084938749,2.0663363931334,1.57053565190418,1.03691978633434,0,1.69107881605257,4.78452947340732,5.46013018508422,6.22243802700952,7.74958940866387,7.94093789806657,5.04636126176742,1.5624526181274,1.15345278868282,1.44950472495604,2.59227005632079,0,0.405450430580328,0.308132871494482,0.389762468933385,0.358053391334963,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0,0,0,1.35232715822533,0.187682475451182,0.36630324853453,0,0,99.3963243006037,81.9378920982775,106.558565499728,80.4272893368458,126.055183637798,98.9566005580508,126.904230043579,125.189294496333,111.926175019099,107.694144844379,5.60451676954554,7.18244772121856,5.63420898988643,5.10524105843418,13.2056292455629,9.55986243940074,10.0011027510727,7.0051919461224,6.09746498224449,6.57012750585873,5.0695859978048,9.43131706930381,6.08669798554236,7.61899313617944,7.17943361945166,7.62069906052918,6.60540657885676,7.7163688185482,10.3021475200827,4.71036544430071,3.77156177623957,7.0990322463735,8.82213902805088,7.26732083161643,9.31682866111773,8.630690004951,6.76833499629258,9.2074399003245,6.51859746460137,7.85599180320834,5.69448086996036,6.69830480153832,7.7753898202241,6.50734732981057,4.43685205256625,16.2376875659665,10.0590591631526,4.72716318906256,1.53030665655075,0.441182838239031,0.927471342481686
|phase1_expression=1.12104192973356,0,0,0,0,1.6787927191189,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,17.093701320365,0,0,0.319984845586813,0.45881856213434,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.74420125104357,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,50.9837481366186,62.9499265333719,42.466704034914,0.338844532069132,0,0,0,0,2.39680088414724,1.15265491596466,16.279269132431,18.0907957364465,14.9330722559481,37.7059299413021,45.719787976984,23.885705846916,23.7696768125226,21.1420320920305,69.3730050296149,68.1850385374902,83.5619540913964,87.0449499019279,81.6984657369518,78.137005583514,60.3035277842983,104.111082855861,97.1796855860512,42.4265163082082,41.2877874317399,37.839087502536,0,0.151143120213571,0,0,0,0.539703191637817,0,0,3.93244376368905,0,0,0,0.704217098883403,0,0,0,0,0,0,2.96878087269556,0,5.64080128446334,5.55153045651635,7.91610243611567,7.61031140944993,11.1534754008941,7.4080885495494,3.39299796590124,0,0,0,0.161766849947409,0,0,1.86391761218122,30.7419836862124,26.3902850584953,1.27728527604296,0,0,0,87.9271053306309,91.5001205637253,32.1675141408933,108.814024440365,123.254850433219,91.2189515616469,98.4804466821289,1.62942982160506,0,0,3.57751155007006,7.026503919986,7.12696523743766,9.00310649026746,7.38453607395004,10.1374383735478,12.9394857487698,7.30873451565885,11.6416516832557,1.07783996466421,1.13463648100692,0.527853372491847,1.09597866213787,0,0,0,2.38841120182192,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0,0.16455984991348,0,0,0.146199987425332,0,0,123.019619910014,45.2780294468851,0,1.58670339998127,1.91959425481711,1.85789337488351,1.67527699718721,1.61346819698674,2.00140239460383,1.33157938278791,0.949058123089023,2.30578536613615,2.76468729680296,2.78539060857611,2.33956904542944,0.898819408654221,0.864552199498777,0.796565093017469,1.70701110857774,2.51346727741403,0,0,0.193952487167626,0.210407459670956,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.757965647081939,0,0.339490171550376,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,51.5367393860812,48.9944849955409,0,0,2.2085575359138,3.12350995437311,6.46270193198397,0.955875191810208,0.891194696329576,0.566153061577665,1.61924280669958,3.79932615284705,5.13874111330481,80.00900778903,0.425820255624806,4.62970569534864,2.28041743095006,0.164970122972535,2.65490276679926,5.82673526771955,5.13950046840077,3.58349651536206,5.02013217897314,3.99665692327106,3.6179961043551,7.99774204850512,3.20847640546249,2.52829406348653,1.05418608574999,0,50.0446220458068,9.72329907769075,11.6422815404479,9.21649250635847,13.3005175231705,19.9773075714319,30.4415688113924,35.0134691481789,0,0,0.882113592219848,0,0,0,0,0,0.874442509889552,39.6810146302491,0,0.82554747185289,0.555583582109135,0,0,0,0,0,0,0,1.42351197111511,1.01659733563424,1.83609079397062,2.29997125615916,2.62035076495413,1.88810084938749,2.0663363931334,1.57053565190418,1.03691978633434,0,1.69107881605257,4.78452947340732,5.46013018508422,6.22243802700952,7.74958940866387,7.94093789806657,5.04636126176742,1.5624526181274,1.15345278868282,1.44950472495604,2.59227005632079,0,0.405450430580328,0.308132871494482,0.389762468933385,0.358053391334963,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0,0,0,1.35232715822533,0.187682475451182,0.36630324853453,0,0,99.3963243006037,81.9378920982775,106.558565499728,80.4272893368458,126.055183637798,98.9566005580508,126.904230043579,125.189294496333,111.926175019099,107.694144844379,5.60451676954554,7.18244772121856,5.63420898988643,5.10524105843418,13.2056292455629,9.55986243940074,10.0011027510727,7.0051919461224,6.09746498224449,6.57012750585873,5.0695859978048,9.43131706930381,6.08669798554236,7.61899313617944,7.17943361945166,7.62069906052918,6.60540657885676,7.7163688185482,10.3021475200827,4.71036544430071,3.77156177623957,7.0990322463735,8.82213902805088,7.26732083161643,9.31682866111773,8.630690004951,6.76833499629258,9.2074399003245,6.51859746460137,7.85599180320834,5.69448086996036,6.69830480153832,7.7753898202241,6.50734732981057,4.43685205256625,16.2376875659665,10.0590591631526,4.72716318906256,1.53030665655075,0.441182838239031,0.927471342481686
|short_description=p1@Pnmal1
|short_description=p1@Pnmal1
}}
}}

Latest revision as of 07:24, 26 September 2015

Short description:p1@Pnmal1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pnmal1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000038163, NM_001007569, uc009fip.1_5end
EntrezGene:Pnmal1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pnmal1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C350.98
Mouse Granule cells, donor2.CNhs12357.11731-123E362.95
Mouse Granule cells, donor3.CNhs12108.11636-122C742.47
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D516.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F518.09
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.93
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F137.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D545.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D223.89
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F223.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D621.14
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D369.37
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F368.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D783.56
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D487.04
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F481.70
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D878.14
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E460.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5104.11
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I697.18
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D642.43
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F641.29
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E137.84
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D75.64
adrenal gland, embryo E14.CNhs11038.406-44C55.55
adrenal gland, embryo E16.CNhs11004.1254-43D67.92
adrenal gland, embryo E17.CNhs11043.1263-45I17.61
adrenal gland, embryo E18.CNhs11026.1262-18F511.15
adrenal gland, neonate N00.CNhs11191.1311-23C17.41
adrenal gland, neonate N25.CNhs11223.1377-27I33.39
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B230.74
cerebellum, neonate N30.CNhs11135.1395-42I226.39
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A487.93
corpus striatum, adult.CNhs10487.19-21D891.50
corpus striatum, neonate N00.CNhs11226.630-43F132.17
cortex, adult.CNhs10473.12-14D5108.81
cortex, neonate N30.CNhs11107.1392-42F2123.25
diencephalon, adult.CNhs10482.20-12F291.22
diencephalon, neonate N30.CNhs11201.1388-42B298.48
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C67.03
eyeball, embryo E14.CNhs10521.399-16E27.13
eyeball, embryo E15.CNhs10593.426-16C99.00
eyeball, embryo E17.CNhs11023.1261-18D47.38
eyeball, neonate N00.CNhs11207.633-15C610.14
eyeball, neonate N01.CNhs11140.1532-43E712.94
eyeball, neonate N02.CNhs11205.1551-44G87.31
eyeball, neonate N16.CNhs11188.777-19A211.64
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8123.02
hippocampus, neonate N00.CNhs11228.627-43G145.28
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F82.51
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C251.54
medulla oblongata, neonate N30.CNhs11200.1396-42A348.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.46
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I980.01
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H74.63
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F45.83
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D78.00
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G850.04
pituitary gland, embryo E12.CNhs11018.346-16E69.72
pituitary gland, embryo E13.CNhs11009.370-44C711.64
pituitary gland, embryo E14.CNhs11037.398-44A59.22
pituitary gland, embryo E15.CNhs10592.427-16B913.30
pituitary gland, embryo E16.CNhs11036.449-43F619.98
pituitary gland, embryo E17.CNhs11039.1265-44F530.44
pituitary gland, neonate N00.CNhs11190.1308-22E935.01
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C939.68
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A92.07
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F54.78
testis, embryo E15.CNhs11034.443-27C55.46
testis, embryo E16.CNhs11033.470-26G56.22
testis, embryo E17.CNhs11029.486-18I57.75
testis, embryo E18.CNhs11027.503-18G57.94
testis, neonate N00.CNhs11189.1300-22B75.05
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A199.40
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A281.94
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3106.56
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D780.43
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4126.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A598.96
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6126.90
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7125.19
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8111.93
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9107.69
whole body, embryo E11.CNhs11014.324-5I85.60
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H25.63
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B113.21
whole body, embryo E16.CNhs10514.453-14F29.56
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.43
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.61
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.82
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.27
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.63
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.69
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.70
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.51
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I516.24
whole body, embryo E18.CNhs10516.493-3B310.06
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.64e-1523
neuroblast (sensu Vertebrata)4.64e-1523
neuron4.67e-1233
neuronal stem cell4.67e-1233
neuroblast4.67e-1233
electrically signaling cell4.67e-1233
electrically responsive cell2.64e-0839
electrically active cell2.64e-0839
neural cell7.42e-0843
ectodermal cell2.07e-0744
neurectodermal cell2.07e-0744

Uber anatomy
Ontology termp-valuen
neurectoderm1.79e-3264
neural plate1.79e-3264
presumptive neural plate1.79e-3264
regional part of nervous system1.67e-3054
central nervous system2.05e-2973
neural tube7.30e-2952
neural rod7.30e-2952
future spinal cord7.30e-2952
neural keel7.30e-2952
nervous system8.90e-2875
pre-chordal neural plate1.12e-2649
brain1.13e-2547
future brain1.13e-2547
ecto-epithelium2.51e-2573
regional part of brain6.23e-2546
ectoderm-derived structure6.72e-2495
ectoderm6.72e-2495
presumptive ectoderm6.72e-2495
anterior neural tube1.22e-2340
regional part of forebrain7.21e-2339
forebrain7.21e-2339
future forebrain7.21e-2339
gray matter2.95e-2034
structure with developmental contribution from neural crest5.64e-2092
brain grey matter3.17e-1729
regional part of telencephalon3.17e-1729
telencephalon3.17e-1729
cerebral cortex1.03e-1121
cerebral hemisphere1.03e-1121
pallium1.03e-1121
regional part of cerebral cortex1.53e-0917
occipital lobe4.42e-0910
visual cortex4.42e-0910
neocortex4.42e-0910
basal ganglion8.09e-078
nuclear complex of neuraxis8.09e-078
aggregate regional part of brain8.09e-078
collection of basal ganglia8.09e-078
cerebral subcortex8.09e-078
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:17545063..17545149,%2B&oldid=4240736"