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FFCP PHASE1:Mm9::chr7:17503029..17503048,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12313,12314,12315
|EntrezGene=12313,12314,12315
|HGNC=
|HGNC=
|MCL_coexpression_id=741
|TSSclassifier=NA
|UniProt=G3UZ90
|UniProt=G3UZ90
|association_with_transcript=-477bp_to_ENSMUST00000173139_5end
|association_with_transcript=-477bp_to_ENSMUST00000173139_5end
|cluster_id=chr7:17503029..17503048,-
|description=CAGE_peak_7_at_Calm2_5end,CAGE_peak_8_at_Calm3_5end,CAGE_peak_9_at_Calm1_5end
|description=CAGE_peak_7_at_Calm2_5end,CAGE_peak_8_at_Calm3_5end,CAGE_peak_9_at_Calm1_5end
|id=chr7:17503029..17503048,-
|id=chr7:17503029..17503048,-
|ontology_enrichment_celltype=CL:0000144!1.20e-14!121;CL:0000012!1.20e-14!121;CL:0002371!6.14e-14!118;CL:0000548!8.38e-13!115;CL:0000004!8.38e-13!115;CL:0000255!8.38e-13!115;CL:0000117!5.62e-12!23;CL:0000337!5.62e-12!23;CL:0002321!1.28e-11!70;CL:0000220!1.28e-11!70;CL:0000055!4.27e-11!50;CL:0000221!9.07e-11!44;CL:0000133!9.07e-11!44;CL:0002319!1.87e-10!43;CL:0000723!4.96e-10!91;CL:0000048!4.96e-10!91;CL:0000034!1.53e-09!97;CL:0000393!5.41e-07!39;CL:0000211!5.41e-07!39
|ontology_enrichment_celltype=CL:0000144!1.20e-14!121;CL:0000012!1.20e-14!121;CL:0002371!6.14e-14!118;CL:0000548!8.38e-13!115;CL:0000004!8.38e-13!115;CL:0000255!8.38e-13!115;CL:0000117!5.62e-12!23;CL:0000337!5.62e-12!23;CL:0002321!1.28e-11!70;CL:0000220!1.28e-11!70;CL:0000055!4.27e-11!50;CL:0000221!9.07e-11!44;CL:0000133!9.07e-11!44;CL:0002319!1.87e-10!43;CL:0000723!4.96e-10!91;CL:0000048!4.96e-10!91;CL:0000034!1.53e-09!97;CL:0000393!5.41e-07!39;CL:0000211!5.41e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,4.52e-17,23;CL:0000337,4.52e-17,23;CL:0000221,2.64e-15,44;CL:0000133,2.64e-15,44;CL:0002319,8.72e-15,43;CL:0002321,1.20e-14,70;CL:0000723,5.85e-10,91;CL:0000048,5.85e-10,91;CL:0000540,9.46e-10,33;CL:0000047,9.46e-10,33;CL:0000031,9.46e-10,33;CL:0000404,9.46e-10,33;CL:0000034,3.45e-09,97;CL:0000393,5.06e-09,39;CL:0000211,5.06e-09,39;CL:0002453,1.41e-08,8
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!8.02e-18!75;UBERON:0001016!8.02e-18!75;UBERON:0001017!9.29e-18!73;UBERON:0005743!9.29e-18!73;UBERON:0001049!3.60e-17!52;UBERON:0005068!3.60e-17!52;UBERON:0006241!3.60e-17!52;UBERON:0007135!3.60e-17!52;UBERON:0002020!4.31e-16!34;UBERON:0000955!8.18e-16!50;UBERON:0006238!8.18e-16!50;UBERON:0002616!1.35e-15!49;UBERON:0002791!5.11e-13!29;UBERON:0003528!5.11e-13!29;UBERON:0001893!5.11e-13!29;UBERON:0002780!6.95e-12!39;UBERON:0001890!6.95e-12!39;UBERON:0006240!6.95e-12!39;UBERON:0003080!1.79e-11!40;UBERON:0000956!7.66e-11!21;UBERON:0001869!7.66e-11!21;UBERON:0000203!7.66e-11!21;UBERON:0002346!1.22e-10!71;UBERON:0003075!1.22e-10!71;UBERON:0007284!1.22e-10!71;UBERON:0000033!1.59e-10!63;UBERON:0002619!1.14e-09!17;UBERON:0004121!3.77e-09!102;UBERON:0000924!3.77e-09!102;UBERON:0006601!3.77e-09!102;UBERON:0003056!5.81e-08!49;UBERON:0002021!7.81e-08!10;UBERON:0000411!7.81e-08!10;UBERON:0001950!7.81e-08!10;UBERON:0003076!8.33e-07!12;UBERON:0003057!8.33e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.34e-24,34;UBERON:0000073,1.60e-23,54;UBERON:0001017,3.29e-22,73;UBERON:0001049,3.29e-21,52;UBERON:0005068,3.29e-21,52;UBERON:0006241,3.29e-21,52;UBERON:0007135,3.29e-21,52;UBERON:0001016,3.45e-21,75;UBERON:0003528,9.50e-19,29;UBERON:0002791,9.50e-19,29;UBERON:0001893,9.50e-19,29;UBERON:0002616,5.88e-16,46;UBERON:0000956,2.17e-15,21;UBERON:0001869,2.17e-15,21;UBERON:0000203,2.17e-15,21;UBERON:0000955,2.17e-15,47;UBERON:0006238,2.17e-15,47;UBERON:0002346,8.07e-15,64;UBERON:0003075,8.07e-15,64;UBERON:0007284,8.07e-15,64;UBERON:0002619,1.43e-14,17;UBERON:0004121,3.09e-14,95;UBERON:0000924,3.09e-14,95;UBERON:0006601,3.09e-14,95;UBERON:0002780,7.97e-14,39;UBERON:0001890,7.97e-14,39;UBERON:0006240,7.97e-14,39;UBERON:0003080,2.97e-13,40;UBERON:0010371,2.86e-12,73;UBERON:0002021,3.30e-12,10;UBERON:0000411,3.30e-12,10;UBERON:0001950,3.30e-12,10;UBERON:0003056,3.09e-09,49;UBERON:0003076,3.14e-09,12;UBERON:0003057,3.14e-09,12;UBERON:0010314,1.37e-08,92;UBERON:0002240,4.31e-07,6;UBERON:0005174,4.31e-07,6;UBERON:0001137,4.31e-07,6
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3404846,0.618105171716683,0.320919209591815,0.505394423527595,1.01391719956096,0,0.280924522409647,0.576226371643824,0.34461281373368,0,0.231768651889711,0.38581844092741,0.824171801606613,0.588795680537589,1.02860775715625,0.887379030796687,0.953744759789284,0.145346416632329,0.470546902076653,0.507687647350059,0,0.263069711437843,0.679020569229309,0,0.474540072496697,0.197008964751127,0,0,0,0.499621155875892,0.467863216890817,0.644613162144895,0.57386499620653,0.220591419119515,0.695603506861264
|phase1_expression=0.320297694209588,1.04692622291808,0.909998478779072,3.0246421130683,1.00179145989269,1.00727563147134,2.33612640595526,0.645616617207881,0.281577444303333,0,0.171217968225505,0.239316476986009,0.856003649656029,0.611942816932982,0.666219523631325,0.809901069559304,2.09868563438444,1.10411757875383,0.685572168028694,0.42438965179803,1.10556277196391,0.794327609607082,0.783599367416806,3.51983330145495,0.45881856213434,1.72269589234506,0.86152399231815,1.72376986148711,4.75058548640935,3.2763916868791,1.99557459589774,0.635030673459631,0,0,0.866554859253824,1.16364251750945,0.612508068787107,1.25559489221072,1.5626706890476,2.09409497589519,0,0.683045484958446,1.94204141212461,0.503587271902309,0.811015449756117,0.183546752161682,3.12956537739216,3.70642765846759,1.5378032791413,3.69416808241138,3.77963338388479,4.31257693094915,0.335565212115473,0,0.336093799142464,1.54355661621568,0.573066879877513,1.54701627683233,1.21389876515759,5.28990979272033,0.633831403506179,1.69422266034566,0.889294796111139,1.7997994345628,1.97773272513395,2.8419204597844,6.2916023208865,5.76327457982332,1.55534418462716,4.05017814995072,0.841299845405528,7.9982275633065,6.62605622854841,1.10241719293459,1.43768206527355,1.83843757322004,9.91042928994498,5.87361755191863,5.83704826373725,1.45074916503213,5.03182039813253,2.08365348222704,12.0048689570594,6.75315132038016,2.59757021220577,9.1334861496837,7.97281412474976,1.86399445825301,0.530083353332288,0.68014404096107,1.15945795480671,1.72084775396277,0,0.539703191637817,0.649776417447669,0.448026887097336,0.421333260395256,1.36344258062446,1.03914401841148,0.70667914902068,1.26759077799012,0,0,0,1.08245520505607,1.01343946190039,1.01104889002957,0.22836775943812,0,0.29688427812965,0.173485326766136,0.608930956624282,0.691846491768175,0.904335843315735,0.23517741427141,0.251333182659351,0.247194967734374,0,0,0,0,0,0,0.878342391034642,1.46612694769419,0.510914110417183,2.27648736561249,0,1.01656181658452,0.299581278809645,0.457500602818626,0.251308704225729,1.04294592115366,1.27857728665165,1.24672826735736,1.29793010454206,0.407357455401265,0.870848794270651,0,0,0.260240885925407,0.689706313300419,0.180062129805349,0.60281927134286,0.204109497453984,0,0.468508622798644,0,0.646703978798527,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0,0,1.40442637462647,2.83082697826187,0.284163499395593,0.621377317606506,0,0.900310307305074,0.473489471170421,0,0.308534225774757,0.930135779001631,0.268273401399619,0.233530684734339,0.16455984991348,0.32833492815819,0.324275238183423,0.146199987425332,0,0.268412837520744,1.89260953707715,0.514523061896422,0.660837565967596,0.528901133327089,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,0.570676878337677,0.949058123089023,0.329397909448022,1.50801125280162,0,0.58489226135736,0,0.432276099749388,0.398282546508734,0.189667900953082,0.456994050438915,1.1270773567308,0.203651327845314,0.581857461502877,0.210407459670956,0.126473074248515,0,0.31399745568275,0.493588655687202,0,0.333690211432188,0,0,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.757965647081939,0.162964976442026,0.509235257325564,0.234690248288502,0.167506257441816,0,0.585400943573396,0.315270288212382,0.221464689648775,0.318909537314974,0.491589944147214,0.172684981865896,0.289298117163023,3.01582567878545,0,0,0,1.44495530989013,1.28932855251423,0.327869890753351,0.504941854408746,0.315508219416257,0,0.215423397732799,0.477937595905104,0.222798674082394,0,0.404810701674894,0.584511715822624,0,0.963963949265421,0.283880170416537,0,0.325773918707152,0.164970122972535,0,0.485561272309963,0.604647113929502,0,0,0.307435147943927,0,0,0.356497378384721,1.26414703174326,1.05418608574999,0,0.680879211507576,0,0.646793418913773,0.428674070063185,0.886701168211368,0.535106452806212,0.329098041204242,0.608929898229199,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0,0.874442509889552,1.66882771809459,0.170870880797853,1.03193433981611,0.370389054739423,0.376736914009382,0,0.457556346413045,1.35982743995084,0.839708713941948,0.690999869022119,0,0.158167996790568,0,0.324016022465404,0.418176592028937,0.218362563746178,0.404593039154462,0.0826534557253359,0,0.777689839750757,0,4.50954350947352,0.299033092087958,0.496375471371293,0,0.387479470433193,0.168956125490778,0.352071715937262,0,0.209718688851422,0.966336483304024,1.44015003128933,0.316011120628178,0.405450430580328,0.410843828659309,1.03936658382236,0.179026695667481,0.39736270956253,0.240390899039938,0,0.201932899896295,0.228620419965,0.100826185136841,0,0.384847366561318,0.818138315270983,0,0,0.358855426437903,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0,2.82375921308533,13.3494318587081,9.73922372846974,3.43706364687375,13.0165678756422,10.5755145634558,10.8003600037089,7.65546045481175,7.25027854374727,9.31968561153276,0.518936737920883,0,0.341467211508268,0.729320151204882,0.419226325255965,0.367687016900028,0.666740183404846,0.618105171716683,0.320919209591815,0.505394423527595,1.01391719956096,0,0.280924522409647,0.576226371643824,0.34461281373368,0,0.231768651889711,0.38581844092741,0.824171801606613,0.588795680537589,1.02860775715625,0.887379030796687,0.953744759789284,0.145346416632329,0.470546902076653,0.507687647350059,0,0.263069711437843,0.679020569229309,0,0.474540072496697,0.197008964751127,0,0,0,0.499621155875892,0.467863216890817,0.644613162144895,0.57386499620653,0.220591419119515,0.695603506861264
|short_description=p7@Calm2,p8@Calm3,p9@Calm1
|short_description=p7@Calm2,p8@Calm3,p9@Calm1
}}
}}

Latest revision as of 07:22, 26 September 2015

Short description:p7@Calm2, p8@Calm3, p9@Calm1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Calm2_5end, CAGE_peak_8_at_Calm3_5end, CAGE_peak_9_at_Calm1_5end
Coexpression cluster:MCL_coexpression_mm9:741
Association with transcript: -477bp_to_ENSMUST00000173139_5end
EntrezGene:12313,12314,12315
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Calm2p8@Calm3p9@Calm1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B94.75
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C86.29
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.28
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.35
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter7.34e-2434
regional part of nervous system1.60e-2354
central nervous system3.29e-2273
neural tube3.29e-2152
neural rod3.29e-2152
future spinal cord3.29e-2152
neural keel3.29e-2152
nervous system3.45e-2175
brain grey matter9.50e-1929
regional part of telencephalon9.50e-1929
telencephalon9.50e-1929
regional part of brain5.88e-1646
cerebral cortex2.17e-1521
cerebral hemisphere2.17e-1521
pallium2.17e-1521
brain2.17e-1547
future brain2.17e-1547
neurectoderm8.07e-1564
neural plate8.07e-1564
presumptive neural plate8.07e-1564
regional part of cerebral cortex1.43e-1417
ectoderm-derived structure3.09e-1495
ectoderm3.09e-1495
presumptive ectoderm3.09e-1495
regional part of forebrain7.97e-1439
forebrain7.97e-1439
future forebrain7.97e-1439
anterior neural tube2.97e-1340
ecto-epithelium2.86e-1273
occipital lobe3.30e-1210
visual cortex3.30e-1210
neocortex3.30e-1210
pre-chordal neural plate3.09e-0949
posterior neural tube3.14e-0912
chordal neural plate3.14e-0912
structure with developmental contribution from neural crest1.37e-0892
spinal cord4.31e-076
dorsal region element4.31e-076
dorsum4.31e-076
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