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FFCP PHASE1:Mm9::chr7:17502533..17502561,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:17502533..17502561,-
|DHSsupport=NA
|short_description=p5@Calm2,p6@Calm3,p7@Calm1
|DPIdataset=NA
|description=CAGE_peak_5_at_Calm2_5end,CAGE_peak_6_at_Calm3_5end,CAGE_peak_7_at_Calm1_5end
|association_with_transcript=0bp_to_ENSMUST00000173139_5end
|EntrezGene=12313,12314,12315
|EntrezGene=12313,12314,12315
|HGNC=
|HGNC=
|MCL_coexpression_id=741
|TSSclassifier=NA
|UniProt=G3UZ90
|UniProt=G3UZ90
|association_with_transcript=0bp_to_ENSMUST00000173139_5end
|cluster_id=chr7:17502533..17502561,-
|description=CAGE_peak_5_at_Calm2_5end,CAGE_peak_6_at_Calm3_5end,CAGE_peak_7_at_Calm1_5end
|id=chr7:17502533..17502561,-
|ontology_enrichment_celltype=CL:0000055!7.09e-14!50;CL:0002319!7.32e-13!43;CL:0000221!1.35e-12!44;CL:0000133!1.35e-12!44;CL:0000393!3.02e-12!39;CL:0000211!3.02e-12!39;CL:0000117!8.54e-12!23;CL:0000337!8.54e-12!23;CL:0000540!2.65e-10!33;CL:0000047!2.65e-10!33;CL:0000031!2.65e-10!33;CL:0000404!2.65e-10!33;CL:0002321!5.43e-09!70;CL:0000220!5.43e-09!70
|ontology_enrichment_celltype_v019_2=CL:0002319,7.18e-16,43;CL:0000221,3.56e-15,44;CL:0000133,3.56e-15,44;CL:0000393,4.67e-15,39;CL:0000211,4.67e-15,39;CL:0000117,5.81e-15,23;CL:0000337,5.81e-15,23;CL:0000540,1.59e-12,33;CL:0000047,1.59e-12,33;CL:0000031,1.59e-12,33;CL:0000404,1.59e-12,33;CL:0002321,2.69e-11,70;CL:0000723,5.39e-08,91;CL:0000048,5.39e-08,91
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!7.75e-25!73;UBERON:0005743!7.75e-25!73;UBERON:0000073!1.25e-23!75;UBERON:0001016!1.25e-23!75;UBERON:0001049!3.78e-19!52;UBERON:0005068!3.78e-19!52;UBERON:0006241!3.78e-19!52;UBERON:0007135!3.78e-19!52;UBERON:0000955!8.81e-18!50;UBERON:0006238!8.81e-18!50;UBERON:0002616!2.06e-17!49;UBERON:0002020!2.35e-17!34;UBERON:0002346!9.80e-16!71;UBERON:0003075!9.80e-16!71;UBERON:0007284!9.80e-16!71;UBERON:0002791!2.61e-14!29;UBERON:0003528!2.61e-14!29;UBERON:0001893!2.61e-14!29;UBERON:0000033!3.14e-14!63;UBERON:0004121!4.38e-14!102;UBERON:0000924!4.38e-14!102;UBERON:0006601!4.38e-14!102;UBERON:0003080!4.45e-13!40;UBERON:0002780!6.91e-13!39;UBERON:0001890!6.91e-13!39;UBERON:0006240!6.91e-13!39;UBERON:0003056!1.21e-11!49;UBERON:0000956!6.54e-11!21;UBERON:0001869!6.54e-11!21;UBERON:0000203!6.54e-11!21;UBERON:0002619!3.65e-10!17;UBERON:0002021!6.26e-08!10;UBERON:0000411!6.26e-08!10;UBERON:0001950!6.26e-08!10;UBERON:0007811!4.63e-07!86;UBERON:0003076!4.90e-07!12;UBERON:0003057!4.90e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.63e-30,73;UBERON:0001016,5.54e-29,75;UBERON:0000073,2.26e-25,54;UBERON:0001049,1.32e-23,52;UBERON:0005068,1.32e-23,52;UBERON:0006241,1.32e-23,52;UBERON:0007135,1.32e-23,52;UBERON:0002020,2.98e-22,34;UBERON:0002346,1.28e-20,64;UBERON:0003075,1.28e-20,64;UBERON:0007284,1.28e-20,64;UBERON:0004121,1.06e-19,95;UBERON:0000924,1.06e-19,95;UBERON:0006601,1.06e-19,95;UBERON:0000955,2.01e-19,47;UBERON:0006238,2.01e-19,47;UBERON:0002616,5.92e-19,46;UBERON:0003528,2.95e-18,29;UBERON:0002791,2.95e-18,29;UBERON:0001893,2.95e-18,29;UBERON:0010371,2.84e-16,73;UBERON:0003080,9.71e-16,40;UBERON:0002780,1.74e-15,39;UBERON:0001890,1.74e-15,39;UBERON:0006240,1.74e-15,39;UBERON:0000956,8.36e-14,21;UBERON:0001869,8.36e-14,21;UBERON:0000203,8.36e-14,21;UBERON:0010314,1.10e-13,92;UBERON:0002619,7.94e-13,17;UBERON:0003056,1.42e-12,49;UBERON:0002021,6.63e-10,10;UBERON:0000411,6.63e-10,10;UBERON:0001950,6.63e-10,10;UBERON:0003076,9.75e-09,12;UBERON:0003057,9.75e-09,12;UBERON:0000025,2.53e-07,114
|phase1_expression=1.28119077683835,0.348975407639361,1.36499771816861,0.90739263392049,0.500895729946347,0.671517087647559,1.40167584357315,0.387369970324729,0.140788722151667,0.234064526321993,0.171217968225505,0.319088635981346,0.342401459862411,0.0874204024189974,1.33243904726265,0.607425802169478,2.79824751251259,0.946386496074713,0.411343300817216,0,0.765389611359628,0.397163804803541,0.522399578277871,1.43993180514066,2.75291137280604,0.57423196411502,0,0.430942465371778,3.23039813075836,0,1.33038306393183,0,1.84519436275371,0,0,0.498703936075477,0.816677425049476,1.25559489221072,0,1.0470474879476,0.588231488031014,0,0.971020706062307,1.38486499773135,1.52065396829272,1.46837401729345,2.34717403304412,3.48840250208714,1.5378032791413,2.3331587888914,3.3596741190087,7.18762821824858,0,2.17608642603403,0.672187598284928,2.82985379639542,4.01146815914259,3.6097046459421,3.03474691289397,6.34789175126439,3.80298842103708,1.69422266034566,3.55717918444456,2.2497492932035,7.9109309005358,2.1314403448383,6.89080254192331,11.5265491596466,1.45165457231869,3.37514845829227,1.05162480675691,7.9982275633065,7.95126747425809,2.08234358665422,2.30029130443767,1.83843757322004,16.5173821499083,6.38436690425939,6.29786786350598,1.84640802822271,5.58074625974699,1.56274011167028,10.3297709630511,8.4414391504752,4.73674568108111,10.0173719061047,10.2507610175354,2.60959224155421,0.605809546665472,0.377857800533928,0.579728977403356,0,0,0.539703191637817,0.649776417447669,0,0.421333260395256,1.53387290320252,1.55871602761721,1.41335829804136,0.704217098883403,2.56652954828636,0,0,1.08245520505607,0.760079596425296,1.51657333504435,0.5709193985953,0.258937883647172,0,0.867426633830679,1.52232739156071,0.230615497256059,0.60289056221049,0.705532242814229,0.753999547978053,0.494389935468748,0.144599356919912,0.884610551949874,0.485300549842228,0.441683036920787,0.484875253135222,1.86391761218122,1.75668478206928,2.51336048176146,1.02182822083437,1.43778149407104,0,0.762421362438388,1.49790639404823,4.57500602818627,1.13088916901578,1.91206752211504,5.37002460393694,3.32460871295296,4.2182728397617,0.81471491080253,0.497627882440372,0,1.05220927943237,0.910843100738926,0.689706313300419,0.360124259610698,1.50704817835715,0.408218994907967,0.768682321709099,0.937017245597288,1.55222022443409,0.862271971731369,0.945530400839096,0.527853372491847,0.876782929710299,0.834141747676794,0,0.205782136407943,0.398068533636986,0.702213187313235,0.772043721344145,1.42081749697796,0.414251545071004,0.938104239924385,1.2604344302271,1.18372367792605,1.37734962223183,0.308534225774757,0.930135779001631,0,0.934122738937356,0.987359099480883,0.656669856316381,0.486412857275134,0.730999937126662,0.439100230582101,0.671032093801859,3.78521907415429,2.88132914661996,1.98251269790279,0.793351699990633,0.426576501070468,0,0.644337306610467,1.00841762311671,1.77902435075896,0.760902504450237,2.84717436926707,0.658795818896044,1.00534083520108,0.994782360205754,1.55971269695296,1.79763881730844,2.16138049874694,2.38969527905241,1.51734320762465,0.228497025219458,1.1270773567308,1.62921062276251,0.193952487167626,0.841629838683823,0.505892296994058,0.442830443938806,0.31399745568275,0.616985819609003,0,0.333690211432188,0.393117990226406,0.224862112384854,0.608580364165509,0.482354319504834,1.52775511068852,0.287696137450811,0.648540907100142,0.549122826376163,2.87536413054709,0,0.312037673114561,0.252578877947112,0.358794827043824,0.482443521363367,0.184753190166605,0.189491411770485,0.325929952884052,1.01847051465113,1.17345124144251,0.335012514883631,0.714130922658041,0.975668239288994,0.315270288212382,0.8858587585951,0.637819074629948,0.163863314715738,0.172684981865896,1.15719246865209,0,1.63171705145613,0,0.551873492609465,2.72936002979246,2.34423373184406,1.63934945376675,0.252470927204373,1.26203287766503,1.17131623288992,1.72338718186239,0.955875191810208,0.668396022247182,0.566153061577665,0,1.75353514746787,1.18586333383957,1.92792789853084,0.283880170416537,2.13678724400706,0.325773918707152,0.989820737835213,0,1.45668381692989,3.02323556964751,0.565815239267694,0.590603785761546,0.614870295887855,0,1.09060118843252,0.712994756769443,0.632073515871632,0,1.03135543248187,0.680879211507576,0,1.68166288917581,0.857348140126369,0.709360934569094,1.07021290561242,1.15184314421485,0.608929898229199,0.23467170806371,0.42366414172764,0.220528398054962,0.32977250588296,0.322928853391811,0.241251699712623,0.477489376012546,0.164140899745061,1.1659233465194,4.63563255026274,0.170870880797853,0.412773735926445,0.555583582109135,0.941842285023455,0.410082683163076,0.457556346413045,0.679913719975421,0.559805809294632,0.138199973804424,0.954670618015114,0.316335993581135,1.01659733563424,0.756037385752609,0.209088296014469,0.218362563746178,0.674321731924103,0.41326727862668,0.523511883968059,1.55537967950151,0,6.76431526421028,0.598066184175915,0.496375471371293,0.388902376688095,0.904118764344118,0.675824501963113,0.469428954583016,0.3906131545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|phase1_expression=1.28119077683835,0.348975407639361,1.36499771816861,0.90739263392049,0.500895729946347,0.671517087647559,1.40167584357315,0.387369970324729,0.140788722151667,0.234064526321993,0.171217968225505,0.319088635981346,0.342401459862411,0.0874204024189974,1.33243904726265,0.607425802169478,2.79824751251259,0.946386496074713,0.411343300817216,0,0.765389611359628,0.397163804803541,0.522399578277871,1.43993180514066,2.75291137280604,0.57423196411502,0,0.430942465371778,3.23039813075836,0,1.33038306393183,0,1.84519436275371,0,0,0.498703936075477,0.816677425049476,1.25559489221072,0,1.0470474879476,0.588231488031014,0,0.971020706062307,1.38486499773135,1.52065396829272,1.46837401729345,2.34717403304412,3.48840250208714,1.5378032791413,2.3331587888914,3.3596741190087,7.18762821824858,0,2.17608642603403,0.672187598284928,2.82985379639542,4.01146815914259,3.6097046459421,3.03474691289397,6.34789175126439,3.80298842103708,1.69422266034566,3.55717918444456,2.2497492932035,7.9109309005358,2.1314403448383,6.89080254192331,11.5265491596466,1.45165457231869,3.37514845829227,1.05162480675691,7.9982275633065,7.95126747425809,2.08234358665422,2.30029130443767,1.83843757322004,16.5173821499083,6.38436690425939,6.29786786350598,1.84640802822271,5.58074625974699,1.56274011167028,10.3297709630511,8.4414391504752,4.73674568108111,10.0173719061047,10.2507610175354,2.60959224155421,0.605809546665472,0.377857800533928,0.579728977403356,0,0,0.539703191637817,0.649776417447669,0,0.421333260395256,1.53387290320252,1.55871602761721,1.41335829804136,0.704217098883403,2.56652954828636,0,0,1.08245520505607,0.760079596425296,1.51657333504435,0.5709193985953,0.258937883647172,0,0.867426633830679,1.52232739156071,0.230615497256059,0.60289056221049,0.705532242814229,0.753999547978053,0.494389935468748,0.144599356919912,0.884610551949874,0.485300549842228,0.441683036920787,0.484875253135222,1.86391761218122,1.75668478206928,2.51336048176146,1.02182822083437,1.43778149407104,0,0.762421362438388,1.49790639404823,4.57500602818627,1.13088916901578,1.91206752211504,5.37002460393694,3.32460871295296,4.2182728397617,0.81471491080253,0.497627882440372,0,1.05220927943237,0.910843100738926,0.689706313300419,0.360124259610698,1.50704817835715,0.408218994907967,0.768682321709099,0.937017245597288,1.55222022443409,0.862271971731369,0.945530400839096,0.527853372491847,0.876782929710299,0.834141747676794,0,0.205782136407943,0.398068533636986,0.702213187313235,0.772043721344145,1.42081749697796,0.414251545071004,0.938104239924385,1.2604344302271,1.18372367792605,1.37734962223183,0.308534225774757,0.930135779001631,0,0.934122738937356,0.987359099480883,0.656669856316381,0.486412857275134,0.730999937126662,0.439100230582101,0.671032093801859,3.78521907415429,2.88132914661996,1.98251269790279,0.793351699990633,0.426576501070468,0,0.644337306610467,1.00841762311671,1.77902435075896,0.760902504450237,2.84717436926707,0.658795818896044,1.00534083520108,0.994782360205754,1.55971269695296,1.79763881730844,2.16138049874694,2.38969527905241,1.51734320762465,0.228497025219458,1.1270773567308,1.62921062276251,0.193952487167626,0.841629838683823,0.505892296994058,0.442830443938806,0.31399745568275,0.616985819609003,0,0.333690211432188,0.393117990226406,0.224862112384854,0.608580364165509,0.482354319504834,1.52775511068852,0.287696137450811,0.648540907100142,0.549122826376163,2.87536413054709,0,0.312037673114561,0.252578877947112,0.358794827043824,0.482443521363367,0.184753190166605,0.189491411770485,0.325929952884052,1.01847051465113,1.17345124144251,0.335012514883631,0.714130922658041,0.975668239288994,0.315270288212382,0.8858587585951,0.637819074629948,0.163863314715738,0.172684981865896,1.15719246865209,0,1.63171705145613,0,0.551873492609465,2.72936002979246,2.34423373184406,1.63934945376675,0.252470927204373,1.26203287766503,1.17131623288992,1.72338718186239,0.955875191810208,0.668396022247182,0.566153061577665,0,1.75353514746787,1.18586333383957,1.92792789853084,0.283880170416537,2.13678724400706,0.325773918707152,0.989820737835213,0,1.45668381692989,3.02323556964751,0.565815239267694,0.590603785761546,0.614870295887855,0,1.09060118843252,0.712994756769443,0.632073515871632,0,1.03135543248187,0.680879211507576,0,1.68166288917581,0.857348140126369,0.709360934569094,1.07021290561242,1.15184314421485,0.608929898229199,0.23467170806371,0.42366414172764,0.220528398054962,0.32977250588296,0.322928853391811,0.241251699712623,0.477489376012546,0.164140899745061,1.1659233465194,4.63563255026274,0.170870880797853,0.412773735926445,0.555583582109135,0.941842285023455,0.410082683163076,0.457556346413045,0.679913719975421,0.559805809294632,0.138199973804424,0.954670618015114,0.316335993581135,1.01659733563424,0.756037385752609,0.209088296014469,0.218362563746178,0.674321731924103,0.41326727862668,0.523511883968059,1.55537967950151,0,6.76431526421028,0.598066184175915,0.496375471371293,0.388902376688095,0.904118764344118,0.675824501963113,0.469428954583016,0.3906131545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|short_description=p5@Calm2,p6@Calm3,p7@Calm1
}}
}}

Latest revision as of 07:20, 26 September 2015

Short description:p5@Calm2, p6@Calm3, p7@Calm1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Calm2_5end, CAGE_peak_6_at_Calm3_5end, CAGE_peak_7_at_Calm1_5end
Coexpression cluster:MCL_coexpression_mm9:741
Association with transcript: 0bp_to_ENSMUST00000173139_5end
EntrezGene:12313,12314,12315
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p5@Calm2p6@Calm3p7@Calm1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.75
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B93.23
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C86.89
Mouse Microglia, donor2.CNhs12634.11736-123E811.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.95
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.58
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G56.76
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.63e-3073
nervous system5.54e-2975
regional part of nervous system2.26e-2554
neural tube1.32e-2352
neural rod1.32e-2352
future spinal cord1.32e-2352
neural keel1.32e-2352
gray matter2.98e-2234
neurectoderm1.28e-2064
neural plate1.28e-2064
presumptive neural plate1.28e-2064
ectoderm-derived structure1.06e-1995
ectoderm1.06e-1995
presumptive ectoderm1.06e-1995
brain2.01e-1947
future brain2.01e-1947
regional part of brain5.92e-1946
brain grey matter2.95e-1829
regional part of telencephalon2.95e-1829
telencephalon2.95e-1829
ecto-epithelium2.84e-1673
anterior neural tube9.71e-1640
regional part of forebrain1.74e-1539
forebrain1.74e-1539
future forebrain1.74e-1539
cerebral cortex8.36e-1421
cerebral hemisphere8.36e-1421
pallium8.36e-1421
structure with developmental contribution from neural crest1.10e-1392
regional part of cerebral cortex7.94e-1317
pre-chordal neural plate1.42e-1249
occipital lobe6.63e-1010
visual cortex6.63e-1010
neocortex6.63e-1010
posterior neural tube9.75e-0912
chordal neural plate9.75e-0912
tube2.53e-07114
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