FFCP PHASE1:Mm9::chr10:75384291..75384298,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20587 | |EntrezGene=20587 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=D6RDC4 | |UniProt=D6RDC4 | ||
|association_with_transcript=35bp_to_ENSMUST00000140388_5end | |association_with_transcript=35bp_to_ENSMUST00000140388_5end | ||
|cluster_id=chr10:75384291..75384298,- | |||
|description=CAGE_peak_2_at_Smarcb1_5end | |description=CAGE_peak_2_at_Smarcb1_5end | ||
|id=chr10:75384291..75384298,- | |id=chr10:75384291..75384298,- | ||
|ontology_enrichment_celltype=CL:0000055!1.14e-12!50;CL:0000393!2.89e-12!39;CL:0000211!2.89e-12!39;CL:0002319!4.77e-12!43;CL:0000221!2.54e-11!44;CL:0000133!2.54e-11!44;CL:0000540!9.41e-11!33;CL:0000047!9.41e-11!33;CL:0000031!9.41e-11!33;CL:0000404!9.41e-11!33;CL:0000117!2.90e-07!23;CL:0000337!2.90e-07!23 | |ontology_enrichment_celltype=CL:0000055!1.14e-12!50;CL:0000393!2.89e-12!39;CL:0000211!2.89e-12!39;CL:0002319!4.77e-12!43;CL:0000221!2.54e-11!44;CL:0000133!2.54e-11!44;CL:0000540!9.41e-11!33;CL:0000047!9.41e-11!33;CL:0000031!9.41e-11!33;CL:0000404!9.41e-11!33;CL:0000117!2.90e-07!23;CL:0000337!2.90e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.68e-12,39;CL:0000211,1.68e-12,39;CL:0002319,6.68e-12,43;CL:0000221,3.17e-11,44;CL:0000133,3.17e-11,44;CL:0000540,7.50e-11,33;CL:0000047,7.50e-11,33;CL:0000031,7.50e-11,33;CL:0000404,7.50e-11,33;CL:0000117,1.89e-07,23;CL:0000337,1.89e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.06e-09!73;UBERON:0005743!6.06e-09!73;UBERON:0000073!1.55e-08!75;UBERON:0001016!1.55e-08!75;UBERON:0004121!4.31e-07!102;UBERON:0000924!4.31e-07!102;UBERON:0006601!4.31e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.96e-09,73;UBERON:0001016,2.51e-08,75;UBERON:0004121,8.52e-07,95;UBERON:0000924,8.52e-07,95;UBERON:0006601,8.52e-07,95 | |||
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|phase1_expression=0.960893082628764,0.348975407639361,0.454999239389536,0.30246421130683,1.00179145989269,0.16787927191189,0.467225281191051,0.129123323441576,0.703943610758334,1.17032263160997,0.513653904676515,0.797721589953364,0.342401459862411,0.174840804837995,0.333109761815663,0.202475267389826,0.699561878128147,0.788655413395594,1.09691546884591,1.69755860719212,1.36069264241712,0.695036658406197,1.56719873483361,0.319984845586813,1.14704640533585,2.29692785646008,0.430761996159075,0.861884930743556,1.14014051673824,1.00812051903972,0.221730510655305,0.635030673459631,0.61506478758457,0,1.1554064790051,0.664938581433969,0.204169356262369,0,0,0,0,0,0,1.88845226963366,2.33166941804883,4.77221555620372,4.69434806608824,1.74420125104357,3.51497892375155,2.13872888981712,0.839918529752175,1.43752564364972,0.838913030288682,0,0.336093799142464,1.54355661621568,8.5960031981627,1.03134418455488,5.26022798234954,9.52183762689659,5.07065122804943,1.69422266034566,2.66788438833342,0.449949858640699,0.988866362566974,1.4209602298922,3.29560121570245,5.76327457982332,2.17748185847803,2.29510095163874,4.6271491497304,3.99911378165325,1.98781686856452,2.44981598429908,2.97120960156533,0.919218786610021,1.10115880999389,1.14918604276669,1.38245879930619,5.14356522147756,5.39777097254217,5.2091337055676,1.95428099300967,0.56276261003168,1.37518422999129,3.53554302568401,1.99320353118744,5.21918448310842,1.06016670666458,0.68014404096107,0.289864488701678,0,0,0.539703191637817,0.649776417447669,2.24013443548668,0.280888840263504,3.91989741929533,3.63700406444016,4.24007489412408,0.422530259330042,1.28326477414318,0,0,1.29894624606728,1.01343946190039,0.505524445014783,0.45673551887624,0,0.29688427812965,2.08182392119363,1.82679286987285,1.15307748628029,1.3565037649736,1.05829836422134,1.50799909595611,1.73036477414062,2.02439099687876,1.76922110389975,1.29413479957927,1.54589062922275,0.969750506270444,1.86391761218122,0.585561594023094,0.209446706813455,0.766371165625774,0.359445373517761,0,0.508280908292259,1.64769703345305,0.915001205637253,2.63874139437015,1.91206752211504,1.27857728665165,2.28566849015516,0.648965052271031,0.81471491080253,0.870848794270651,0.505445516867349,0.631325567659422,2.47228841629137,2.98872735763515,3.24111833649629,1.9591626318643,1.15662048557257,1.66547836370305,1.12442069471675,0.776110112217047,3.88022387279116,3.40390944302075,4.04687585577082,1.53437012699302,3.33656699070717,1.74126083261083,2.46938563689532,2.18937693500343,1.40442637462647,0,0,1.44988040774851,1.87620847984877,1.08037236876609,0.946978942340841,0.590292695242212,0.771335564436891,0.930135779001631,1.3413670069981,0.350296027101508,0.822799249567402,0.32833492815819,0.486412857275134,1.46199987425332,0.658650345873152,0.805238512562231,0,2.77842453424068,0.330418782983798,0,1.2797295032114,1.39342003116263,1.28867461322093,0.605050573870028,1.11189021922435,1.14135375667535,0.949058123089023,0.823494773620054,0.251335208800269,0,0.38992817423824,0,0.216138049874694,0.398282546508734,0.758671603812327,2.28497025219458,3.38123207019241,1.83286195060783,0.969762435838129,0.561086559122548,1.26473074248515,1.18088118383682,1.41298855057237,0.740382983530803,0,0.83422552858047,0.982794975566015,0.899448449539415,1.42002084971952,0.964708639009667,0.763877555344259,1.15078454980324,0.162135226775035,1.09824565275233,0,0.372140947668503,1.5601883655728,0.757736633841335,1.07638448113147,0,0.739012760666419,2.4633883530163,1.79261474086228,1.35796068620151,1.87752198630802,1.67506257441816,2.14239276797412,2.73187107000918,1.41871629695572,2.6575762757853,2.07291199254733,0.983179888294428,1.03610989119537,1.73578870297814,1.50791283939272,0,1.47529281905711,1.10374698521893,1.28440471990234,1.40654023910644,0.819674726883377,1.00988370881749,3.78609863299508,1.95219372148319,1.93881057959519,2.86762557543062,3.34198011123591,2.83076530788832,3.64329631507405,3.79932615284705,4.74345333535828,0.321321316421807,1.98716119291576,2.31485284767432,0.81443479676788,2.3095817216155,0,1.21390318077491,0.906970670894253,0.188605079755898,0.885905678642318,0.614870295887855,0.516856586336442,0.727067458955011,1.06949213515416,0.632073515871632,0,1.03135543248187,0.680879211507576,2.70091641046965,2.58717367565509,1.07168517515796,2.12808280370728,1.42695054081656,1.31639216481697,1.8267896946876,4.69343416127421,1.48282449604674,0.882113592219848,0.32977250588296,1.13025098687134,0.603129249281559,0.477489376012546,0.656563598980245,0.291480836629851,1.48340241608408,0.341741761595705,1.44470807574256,0.555583582109135,0.565105371014073,0.546776910884101,1.60144721244566,0.509935289981566,0.559805809294632,0.276399947608848,0,2.21435195506795,0.813277868507395,0.648032044930808,0.418176592028937,0.218362563746178,0.809186078308924,1.32245529160537,0,0.388844919875379,0,7.32800820289447,3.58839710505549,4.79829622325583,3.69457257853691,4.39143399824286,3.04121025883401,1.64300134104056,2.0832701575032,3.67007705489988,2.17425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| ||
|short_description=p2@Smarcb1 | |short_description=p2@Smarcb1 | ||
}} | }} |
Latest revision as of 07:17, 26 September 2015
Short description: | p2@Smarcb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Smarcb1_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_ENSMUST00000140388_5end |
EntrezGene: | Smarcb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.68e-12 | 39 |
electrically active cell | 1.68e-12 | 39 |
neural cell | 6.68e-12 | 43 |
ectodermal cell | 3.17e-11 | 44 |
neurectodermal cell | 3.17e-11 | 44 |
neuron | 7.50e-11 | 33 |
neuronal stem cell | 7.50e-11 | 33 |
neuroblast | 7.50e-11 | 33 |
electrically signaling cell | 7.50e-11 | 33 |
CNS neuron (sensu Vertebrata) | 1.89e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.89e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.96e-09 | 73 |
nervous system | 2.51e-08 | 75 |
ectoderm-derived structure | 8.52e-07 | 95 |
ectoderm | 8.52e-07 | 95 |
presumptive ectoderm | 8.52e-07 | 95 |