FFCP PHASE1:Mm9::chr17:34092603..34092631,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100039740,20084 | |EntrezGene=100039740,20084 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=776 | |||
|TSSclassifier=NA | |||
|UniProt=G3UZW2 | |UniProt=G3UZW2 | ||
|association_with_transcript=0bp_to_ENSMUST00000173871,ENSMUST00000174175,ENSMUST00000174662_5end | |association_with_transcript=0bp_to_ENSMUST00000173871,ENSMUST00000174175,ENSMUST00000174662_5end | ||
|cluster_id=chr17:34092603..34092631,- | |||
|description=CAGE_peak_1_at_Gm10260_5end,CAGE_peak_1_at_Rps18_5end | |description=CAGE_peak_1_at_Gm10260_5end,CAGE_peak_1_at_Rps18_5end | ||
|id=chr17:34092603..34092631,- | |id=chr17:34092603..34092631,- | ||
|ontology_enrichment_celltype=CL:0000219!6.48e-21!54;CL:0000548!3.03e-20!115;CL:0000004!3.03e-20!115;CL:0000255!3.03e-20!115;CL:0000034!1.22e-19!97;CL:0000144!1.28e-19!121;CL:0000012!1.28e-19!121;CL:0002371!2.16e-18!118;CL:0002320!1.35e-17!46;CL:0000134!1.35e-17!46;CL:0000723!9.59e-17!91;CL:0000048!9.59e-17!91;CL:0000988!2.36e-15!32;CL:0002032!2.36e-15!32;CL:0000037!2.36e-15!32;CL:0000566!2.36e-15!32;CL:0000837!2.36e-15!32;CL:0000063!2.63e-13!66;CL:0002031!3.19e-12!25;CL:0000049!3.57e-09!19;CL:0000838!8.96e-08!12;CL:0000763!1.23e-07!16;CL:0000084!1.41e-07!11;CL:0000827!1.41e-07!11;CL:0000738!1.75e-07!17;CL:0002087!1.75e-07!17;CL:0000542!2.40e-07!13;CL:0000051!2.40e-07!13;CL:0000791!7.45e-07!9;CL:0000789!7.45e-07!9;CL:0002420!7.45e-07!9;CL:0002419!7.45e-07!9;CL:0000790!7.45e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,6.48e-21,54;CL:0000034,1.22e-19,97;CL:0002320,1.35e-17,46;CL:0000134,1.35e-17,46;CL:0000723,9.59e-17,91;CL:0000048,9.59e-17,91;CL:0000988,2.36e-15,32;CL:0002032,2.36e-15,32;CL:0000037,2.36e-15,32;CL:0000837,2.36e-15,32;CL:0002031,3.19e-12,25;CL:0000049,3.57e-09,19;CL:0000838,8.96e-08,12;CL:0000763,1.23e-07,16;CL:0000084,1.41e-07,11;CL:0000827,1.41e-07,11;CL:0000738,1.75e-07,17;CL:0002087,1.75e-07,17;CL:0000542,2.40e-07,13;CL:0000051,2.40e-07,13;CL:0000791,7.45e-07,9;CL:0000789,7.45e-07,9;CL:0002420,7.45e-07,9;CL:0002419,7.45e-07,9;CL:0000790,7.45e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.35e-17!46;UBERON:0002371!4.00e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.35e-17,46;UBERON:0002371,4.00e-07,16 | |||
|phase1_expression=21.780243206252,7.67745896806594,7.73498706962211,7.25914107136392,11.520601788766,17.4594442788365,31.537706480396,49.8416028484484,85.8811205125167,113.521295266167,56.1594935779656,58.3134482255909,49.134609490256,50.4415721957615,38.9738421324325,33.0034685845416,34.2785320282792,44.7956274808698,37.9806981087896,44.9853030905912,20.4103896362567,31.8723953354842,41.7919662622297,29.7585906395736,26.6114766037917,14.9300310669905,25.8457197695445,23.0554218973901,23.5629040125904,16.8860186939154,25.2772782147047,72.393496774398,73.1927097225638,47.5445043046316,27.1520522566198,39.3976109499627,35.1171292771275,3.76678467663217,14.8453715459522,10.470474879476,6.47054636834116,4.09827290975067,3.39857247121808,37.2654581207709,33.7585180960983,31.7535881239709,74.3271777130637,38.1544023665781,21.7489320907127,27.8034755676225,51.5150031581334,56.0635001023389,30.7042169085658,49.3246256567714,63.1856342387832,43.734104126111,37.5358806319771,28.8776371675368,20.8385954685386,20.1016572123373,35.494558596346,62.0085493686512,95.1545431838919,35.0960889739746,38.565788140112,36.9449659771972,31.1584114939141,33.8112108682968,22.8117147078651,18.9008313664367,27.1319200143283,19.9955689082663,28.4920417827581,21.5583806618319,26.0699681169603,45.960939330501,9.91042928994498,13.7902325132003,13.8245879930619,24.7946220932764,23.6952996930241,21.3574481928272,15.0758819460746,22.5105044012672,14.6686317865738,19.4454866412621,20.3591503542717,19.0127434741807,36.8786561532606,28.9439075208989,12.4641730141721,15.487629785665,42.1582226898805,25.3660500069774,15.5946340187441,17.0250217096988,18.3982190372595,43.6301625799828,94.3023196708414,62.1877651138199,18.7321748302985,19.2489716121477,5.09610479413291,0,37.2364590539288,33.6968621081881,44.9916756063157,13.245330047411,12.4290184150642,11.4300447079915,27.5841669558156,28.6197549613413,22.6003187310937,22.3069508017881,16.2272415847273,9.29932775839599,14.8316980640624,10.4111536982336,11.4999371753484,15.0443170451091,12.367125033782,12.6067565815158,9.31958806090611,6.44117753425404,2.51336048176146,17.6265368093928,34.9860163557287,75.5877441051694,47.0159840170339,9.13722900369418,12.3525162761029,12.8167439155122,9.38651329038293,4.60287823194595,11.6361304953354,9.40999325792994,19.960515314662,15.1776504144313,26.5358896355358,11.7847439296425,17.6963802429277,18.1622662502444,21.6074555766419,17.1803492332715,9.79725587779121,9.99287018221828,11.1505052226077,11.1242449417777,22.8502072508813,16.8304411349359,19.3546236580344,20.1660073833369,18.9072129473407,21.5916343243743,18.108828003899,20.5005294823048,81.4567297283352,71.5427181778908,46.8869774002728,19.4698226183372,19.9347150983932,17.4660199617184,19.176323582402,16.3314312350345,14.9639099500757,15.8123082430277,13.413670069981,13.5447797145917,11.0255099442032,11.984224877774,10.3768076218695,11.2573990317506,11.1970558798436,9.93127498826751,8.20130799400096,13.8921226712034,2.97376904685418,17.4537373997939,19.8358072997768,16.0243303583703,21.2631311181454,17.3447831176075,20.6811580775729,17.8812088545806,8.54152310780121,20.4226703857773,14.8287773192159,13.9269530428806,14.622306533934,10.7858329038507,12.3198688428576,11.5501938487533,32.62287896393,20.7932292949706,21.4144697778853,19.1432248174595,14.3524840504043,17.0430042333474,9.10606134589305,7.0852871030209,9.73392112616524,9.87177311374404,18.9729681335775,32.3679505089222,34.5943831399237,34.4039031948826,31.443318815218,26.5294875727659,26.7357144370491,28.4819176076303,36.480426024383,26.907018492432,8.62609239164127,18.6070473834252,20.2824487524464,16.1650481886152,18.8367284198008,20.2626278972614,13.6717360723287,28.8026945891137,28.6818358537966,21.7273709792241,19.9486711045227,22.9483572695288,18.8054476299951,10.1469496886055,12.6108115284953,13.0664166892777,7.65382889555938,11.4704320301017,9.84304396635605,11.4272756279394,13.5712155545345,41.3368319702219,18.6870423747234,24.5583704211212,10.7568895291821,8.32202974804643,91.9675043563149,12.876017287423,26.8181986503818,29.6733445665445,22.6194567619439,28.4372869563537,19.3834846451683,24.0615051170508,14.5731852602962,24.5494920645502,18.5785255634866,7.39039027770156,16.4650498841592,22.9704628730759,17.5917916101862,16.4970122972535,31.8588332015911,33.9892890616974,31.4416499243341,41.6817226260535,34.8456233599312,28.5914687587853,15.5056975900933,24.7202936044704,25.6678112436999,24.3348303610578,31.6255825724996,36.0974401368654,11.5749465956288,20.1668425315067,21.3441828241545,19.2903331528433,18.2660440651542,17.1234064897988,17.6067452044269,20.3991515906782,23.9365142224985,13.3454204644207,26.9044645627054,15.4993077764991,19.0528023501169,14.2338502830448,17.5477345684611,16.2499490747611,14.2825609948627,9.08583979851498,26.9975991660607,26.2111322313293,21.2973706475168,25.0530047816239,20.7775226135958,22.6490391474457,34.6755997187465,34.1481543669725,31.2331940797998,31.5041303944987,27.0467274511871,23.1784192524607,19.7649773703896,19.6542998253601,16.1588297172171,18.2066867619508,13.4725132832298,13.6113089831695,10.8876577565106,9.94142900939081,105.410579533944,18.6895682554973,28.4588603586208,19.0562164577167,29.4484397529227,20.9505595608565,23.4714477291508,16.1453437206498,21.1815875739936,28.0237580158167,37.1558708072646,22.4367895646007,31.0169579393951,27.1156926915144,27.5432144712925,19.1558564364205,20.265498187689,15.7456038871159,18.9042594783459,19.2845919400962,14.93653410438,13.6115349934735,11.012740523592,14.3355644044091,10.9864288050675,16.3245876202952,55.7184742968902,63.4276966228993,41.8032694746555,18.9325802151547,25.9001816122631,19.9635270451319,23.5805216986972,21.0660283694853,11.8597886949584,13.3494318587081,14.3223878359849,9.6237782112465,6.85082519770642,6.0431511791176,9.45031500324528,6.30449684513909,7.25027854374727,7.7664046762773,22.8332164685189,9.17757208822371,22.1953687480374,18.9623239313269,28.2977769547776,23.8996560985018,18.8909718631373,22.2517861818006,16.0459604795908,14.6564382823003,24.0805334895728,13.7697229211836,14.2335091354221,11.6525777376862,13.4398997356135,12.3836359733599,9.85016770531272,14.2752823143142,13.5988347265091,20.019053138278,20.2292858907395,16.8602015851371,11.921809497366,16.7148379127178,13.5517507798076,11.9306597127264,15.1830217484401,22.0978557607788,15.8890813199658,30.3016826695179,15.659822392391,12.7070782264477,10.6400071224119,12.2400104536913,23.148793317737,17.4867404556562,15.6734177658424,18.2640395941054,21.4242931917105,22.2797333310711,24.1142549045238 | |phase1_expression=21.780243206252,7.67745896806594,7.73498706962211,7.25914107136392,11.520601788766,17.4594442788365,31.537706480396,49.8416028484484,85.8811205125167,113.521295266167,56.1594935779656,58.3134482255909,49.134609490256,50.4415721957615,38.9738421324325,33.0034685845416,34.2785320282792,44.7956274808698,37.9806981087896,44.9853030905912,20.4103896362567,31.8723953354842,41.7919662622297,29.7585906395736,26.6114766037917,14.9300310669905,25.8457197695445,23.0554218973901,23.5629040125904,16.8860186939154,25.2772782147047,72.393496774398,73.1927097225638,47.5445043046316,27.1520522566198,39.3976109499627,35.1171292771275,3.76678467663217,14.8453715459522,10.470474879476,6.47054636834116,4.09827290975067,3.39857247121808,37.2654581207709,33.7585180960983,31.7535881239709,74.3271777130637,38.1544023665781,21.7489320907127,27.8034755676225,51.5150031581334,56.0635001023389,30.7042169085658,49.3246256567714,63.1856342387832,43.734104126111,37.5358806319771,28.8776371675368,20.8385954685386,20.1016572123373,35.494558596346,62.0085493686512,95.1545431838919,35.0960889739746,38.565788140112,36.9449659771972,31.1584114939141,33.8112108682968,22.8117147078651,18.9008313664367,27.1319200143283,19.9955689082663,28.4920417827581,21.5583806618319,26.0699681169603,45.960939330501,9.91042928994498,13.7902325132003,13.8245879930619,24.7946220932764,23.6952996930241,21.3574481928272,15.0758819460746,22.5105044012672,14.6686317865738,19.4454866412621,20.3591503542717,19.0127434741807,36.8786561532606,28.9439075208989,12.4641730141721,15.487629785665,42.1582226898805,25.3660500069774,15.5946340187441,17.0250217096988,18.3982190372595,43.6301625799828,94.3023196708414,62.1877651138199,18.7321748302985,19.2489716121477,5.09610479413291,0,37.2364590539288,33.6968621081881,44.9916756063157,13.245330047411,12.4290184150642,11.4300447079915,27.5841669558156,28.6197549613413,22.6003187310937,22.3069508017881,16.2272415847273,9.29932775839599,14.8316980640624,10.4111536982336,11.4999371753484,15.0443170451091,12.367125033782,12.6067565815158,9.31958806090611,6.44117753425404,2.51336048176146,17.6265368093928,34.9860163557287,75.5877441051694,47.0159840170339,9.13722900369418,12.3525162761029,12.8167439155122,9.38651329038293,4.60287823194595,11.6361304953354,9.40999325792994,19.960515314662,15.1776504144313,26.5358896355358,11.7847439296425,17.6963802429277,18.1622662502444,21.6074555766419,17.1803492332715,9.79725587779121,9.99287018221828,11.1505052226077,11.1242449417777,22.8502072508813,16.8304411349359,19.3546236580344,20.1660073833369,18.9072129473407,21.5916343243743,18.108828003899,20.5005294823048,81.4567297283352,71.5427181778908,46.8869774002728,19.4698226183372,19.9347150983932,17.4660199617184,19.176323582402,16.3314312350345,14.9639099500757,15.8123082430277,13.413670069981,13.5447797145917,11.0255099442032,11.984224877774,10.3768076218695,11.2573990317506,11.1970558798436,9.93127498826751,8.20130799400096,13.8921226712034,2.97376904685418,17.4537373997939,19.8358072997768,16.0243303583703,21.2631311181454,17.3447831176075,20.6811580775729,17.8812088545806,8.54152310780121,20.4226703857773,14.8287773192159,13.9269530428806,14.622306533934,10.7858329038507,12.3198688428576,11.5501938487533,32.62287896393,20.7932292949706,21.4144697778853,19.1432248174595,14.3524840504043,17.0430042333474,9.10606134589305,7.0852871030209,9.73392112616524,9.87177311374404,18.9729681335775,32.3679505089222,34.5943831399237,34.4039031948826,31.443318815218,26.5294875727659,26.7357144370491,28.4819176076303,36.480426024383,26.907018492432,8.62609239164127,18.6070473834252,20.2824487524464,16.1650481886152,18.8367284198008,20.2626278972614,13.6717360723287,28.8026945891137,28.6818358537966,21.7273709792241,19.9486711045227,22.9483572695288,18.8054476299951,10.1469496886055,12.6108115284953,13.0664166892777,7.65382889555938,11.4704320301017,9.84304396635605,11.4272756279394,13.5712155545345,41.3368319702219,18.6870423747234,24.5583704211212,10.7568895291821,8.32202974804643,91.9675043563149,12.876017287423,26.8181986503818,29.6733445665445,22.6194567619439,28.4372869563537,19.3834846451683,24.0615051170508,14.5731852602962,24.5494920645502,18.5785255634866,7.39039027770156,16.4650498841592,22.9704628730759,17.5917916101862,16.4970122972535,31.8588332015911,33.9892890616974,31.4416499243341,41.6817226260535,34.8456233599312,28.5914687587853,15.5056975900933,24.7202936044704,25.6678112436999,24.3348303610578,31.6255825724996,36.0974401368654,11.5749465956288,20.1668425315067,21.3441828241545,19.2903331528433,18.2660440651542,17.1234064897988,17.6067452044269,20.3991515906782,23.9365142224985,13.3454204644207,26.9044645627054,15.4993077764991,19.0528023501169,14.2338502830448,17.5477345684611,16.2499490747611,14.2825609948627,9.08583979851498,26.9975991660607,26.2111322313293,21.2973706475168,25.0530047816239,20.7775226135958,22.6490391474457,34.6755997187465,34.1481543669725,31.2331940797998,31.5041303944987,27.0467274511871,23.1784192524607,19.7649773703896,19.6542998253601,16.1588297172171,18.2066867619508,13.4725132832298,13.6113089831695,10.8876577565106,9.94142900939081,105.410579533944,18.6895682554973,28.4588603586208,19.0562164577167,29.4484397529227,20.9505595608565,23.4714477291508,16.1453437206498,21.1815875739936,28.0237580158167,37.1558708072646,22.4367895646007,31.0169579393951,27.1156926915144,27.5432144712925,19.1558564364205,20.265498187689,15.7456038871159,18.9042594783459,19.2845919400962,14.93653410438,13.6115349934735,11.012740523592,14.3355644044091,10.9864288050675,16.3245876202952,55.7184742968902,63.4276966228993,41.8032694746555,18.9325802151547,25.9001816122631,19.9635270451319,23.5805216986972,21.0660283694853,11.8597886949584,13.3494318587081,14.3223878359849,9.6237782112465,6.85082519770642,6.0431511791176,9.45031500324528,6.30449684513909,7.25027854374727,7.7664046762773,22.8332164685189,9.17757208822371,22.1953687480374,18.9623239313269,28.2977769547776,23.8996560985018,18.8909718631373,22.2517861818006,16.0459604795908,14.6564382823003,24.0805334895728,13.7697229211836,14.2335091354221,11.6525777376862,13.4398997356135,12.3836359733599,9.85016770531272,14.2752823143142,13.5988347265091,20.019053138278,20.2292858907395,16.8602015851371,11.921809497366,16.7148379127178,13.5517507798076,11.9306597127264,15.1830217484401,22.0978557607788,15.8890813199658,30.3016826695179,15.659822392391,12.7070782264477,10.6400071224119,12.2400104536913,23.148793317737,17.4867404556562,15.6734177658424,18.2640395941054,21.4242931917105,22.2797333310711,24.1142549045238 | ||
|short_description=p1@Gm10260,p1@Rps18 | |short_description=p1@Gm10260,p1@Rps18 | ||
}} | }} |
Latest revision as of 07:15, 26 September 2015
Short description: | p1@Gm10260, p1@Rps18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm10260_5end, CAGE_peak_1_at_Rps18_5end |
Coexpression cluster: | MCL_coexpression_mm9:776 |
Association with transcript: | 0bp_to_ENSMUST00000173871, ENSMUST00000174175, ENSMUST00000174662_5end |
EntrezGene: | 100039740,20084 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 6.48e-21 | 54 |
stem cell | 1.22e-19 | 97 |
connective tissue cell | 1.35e-17 | 46 |
mesenchymal cell | 1.35e-17 | 46 |
somatic stem cell | 9.59e-17 | 91 |
multi fate stem cell | 9.59e-17 | 91 |
hematopoietic cell | 2.36e-15 | 32 |
hematopoietic oligopotent progenitor cell | 2.36e-15 | 32 |
hematopoietic stem cell | 2.36e-15 | 32 |
hematopoietic multipotent progenitor cell | 2.36e-15 | 32 |
hematopoietic lineage restricted progenitor cell | 3.19e-12 | 25 |
common myeloid progenitor | 3.57e-09 | 19 |
lymphoid lineage restricted progenitor cell | 8.96e-08 | 12 |
myeloid cell | 1.23e-07 | 16 |
T cell | 1.41e-07 | 11 |
pro-T cell | 1.41e-07 | 11 |
leukocyte | 1.75e-07 | 17 |
nongranular leukocyte | 1.75e-07 | 17 |
lymphocyte | 2.40e-07 | 13 |
common lymphoid progenitor | 2.40e-07 | 13 |
mature alpha-beta T cell | 7.45e-07 | 9 |
alpha-beta T cell | 7.45e-07 | 9 |
immature T cell | 7.45e-07 | 9 |
mature T cell | 7.45e-07 | 9 |
immature alpha-beta T cell | 7.45e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.35e-17 | 46 |
bone marrow | 4.00e-07 | 16 |